Takifugu rubripes (torafugu): 101065413
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Entry
101065413 CDS
T02386
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101065413
Membrane trafficking [BR:
tru04131
]
Protein recycling
Others
Others
101065413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
101065413
NCBI-ProteinID:
XP_029691212
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Position
4:10572385..10606626
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AA seq
1087 aa
AA seq
DB search
MEQLPDIVTEDAAGSSKSRTRSARSAETWSGFRAEGVEDASLLDQEEFQLTSSTFALSED
TAHNQAMVHWSGQNSSVILMLTKYYDFNSGRVTESSLWRSTDYGTTYEKLNEKVGPKVIL
SYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKHGLAFDILSLLFHPEQEDWILAY
SHDQKLYVSVEFGRRWQLVHDSIVPNRFYWSRLGLDKDQGMIHLEISVSDGRSQYITCKL
QNCSDGNRGKPFPGFIIPNSLVVQDEYVFIQVPVGGQSVHYVSYKRNAFYPMKLPKYTLP
KDLQIISTDDNQVVAAIQDWHQNDSYNLYMSESRGLFFTLMLESVVSSRGPEGNVMIDLY
EVAGIKGVFLSNKVVENQVKTYITYNKGRDWHLLRAPAADLQGNKLDCEQPHCSLHLHLH
VSENPYTSGNIVSKDSAPGIIIASGVVGAELTNTNVSIFITADAGNTWREIFQEEYSIFF
LNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFTSSPLYVDGVLGEPGEDILIMTIFG
HFSHRSEWQLVKIDFRSIFQHRCTSEDYVTWQLHNEGEACIMGMKRIFQKLKANVRCVKA
RDQYNSQMSDSCPCTEADFECDYGFERQIDGSCAPAFWFVPSATSRDCTTGDTFLNTTGY
RRALSNNCTEGAPLRFSPRRQKCPSRAPRGLQLLTSEGTLVATLGRNVTFLVFLEEGLSA
TTSITVDFGDGTAISYVNMSSIDDGIKHSYVKVGIYQVSATATNSLGSDRVMLYLHVSCQ
LEVVQLLAPSVVLQDKAVNFTTVLRPSSVGTVTYYWWFDNKTEPFVTLDGGTSSTFSKEG
SHTVTVQASVGNSVLQDQMTIAVYEYFRSHVLAFSSNLDELNPGVSEWREDIGRVVKSST
VQVTGISEEQLLVTVLPGFPTTAELFIVPERRVKHGSAEERRAHVDQLSQVLLSALNQDL
VQFTLKPGLRVNVYATRLSPAPLVDASDGVHSSTAVIMLVSVVLMGLAIFVVYKFKRKIP
GINTYTAEQPEKEQEVIPTVTSIDVPNPEGERLTSLERVDAQPDSKSRGYLPSHTDIKLP
DEAPHVF
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttgccagatatcgtgaccgaggacgcggctgggtccagtaagagccgaact
cgaagcgcgcgaagcgcggagacctggtccggattcagggcagagggtgtggaggacgct
tcgctcttggaccaggaggagtttcagctgacaagttcgacgtttgcgctgagcgaggac
acggctcacaaccaggcgatggtgcactggtccgggcagaacagcagcgtgatcctcatg
ctgacaaagtactacgacttcaactccggcagagtaacagagagctccttatggaggtca
actgattatgggaccacctacgagaagcttaacgagaaggtcgggccaaaagtcatactg
agctacttgtacgtgagtccgaataacaaacggaagatcatgttacttacggacccggag
gtggagagcagcctgctcattagcctggacgagggggcgtcctatcagaaacacggctta
gctttcgacatcctcagtcttctctttcacccggagcaggaggactggatcctggcttat
agccatgaccaaaagctctacgtctctgttgaattcgggcggagatggcagcttgtgcac
gacagcatcgtccccaacagattctactggtcaagactggggttggacaaggatcaaggg
atgatccacctggagatcagcgtctccgacggacggtcacagtacataacctgcaaactt
cagaactgctctgatggaaacaggggcaagccattccctggatttatcatccccaattcc
ctggtggtccaggatgaatatgttttcatccaggttccagtagggggccagtcggtccat
tacgtgtcatataaaagaaacgcattctacccgatgaagctccccaagtatactttgcca
aaggacctccagataatcagcactgatgacaaccaggtggtggcggccattcaggactgg
caccagaacgactcctataacctctacatgtccgagtccagggggctcttcttcactctg
atgttggagagcgtggtgagcagtcgaggacccgaaggcaacgtcatgatcgacctctac
gaggttgccgggattaaaggggtattcctgtcaaataaagttgtcgagaaccaagtgaag
acttacatcacgtacaacaagggcagagactggcaccttctccgggctcctgcagctgat
ctgcaggggaacaagcttgactgcgagcagccccactgttccctgcacctgcacctgcac
gtgtcggagaatccttacacctcaggaaacattgtcagcaaagactcggctcccggaatc
ataatcgcatcaggcgtggtcggagcggagctcaccaacaccaacgtcagcattttcatc
acggccgacgctgggaacacctggagagagatcttccaggaggagtacagcatcttcttc
ctgaaccaaggaggatctctggtggccatccgacacacgccgctgccaattagacatatt
tggctgagttttgatgaaggcagaaactgggacaaatatagcttcacctcttctccgctc
tacgtggatggcgtgctgggggaacctggagaggacatcctgatcatgacaattttcggc
cacttcagtcaccgttccgagtggcagctcgtcaaaattgacttccggtccatttttcaa
caccgatgcacatcggaggattacgtgacgtggcagctacacaacgagggggaagcgtgc
atcatgggaatgaagagaatcttccaaaaactgaaagcgaatgttcgatgtgtcaaggcc
agagatcagtataattcccagatgtcggactcctgcccgtgcacagaggcggattttgag
tgcgactacggctttgagaggcagattgatggaagctgcgctccggcgttctggttcgtt
ccctcagcgacatctagagactgcaccacaggagacaccttcctcaacaccaccggatat
cgcagggctttgtcgaacaactgcaccgagggagcccccctgaggttcagccccaggcgt
cagaagtgccccagtcgggctcccaggggcctccagctgctcaccagcgagggaacgctg
gtagcaaccctggggaggaatgtcactttcctggtctttctggaggagggtctcagcgcc
accacaagtataacagtggactttggtgacggcacggccatttcttacgtcaacatgagc
tctattgatgacgggatcaagcacagctacgttaaagtgggcatctaccaggtttcggcc
acagcgaccaactctctgggctccgacagggtgatgctctaccttcatgtctcctgtcag
ctggaggtggtgcagctcttggctccttctgtggtgctccaggacaaagcggtcaacttc
accaccgtgttgcgacccagcagcgtgggcaccgtcacctactactggtggttcgacaac
aaaacggagccttttgtgaccctggacggagggacgtcctccactttcagcaaggaggga
agtcacacggtcaccgttcaggcctcagtgggcaacagcgtcctgcaggatcaaatgacc
atcgcggtttatgaatatttccgctcacatgttctggcgttttcctctaatctggacgag
ctgaacccgggggtgtctgagtggagggaggacatcggcagagtggtgaagagctccacg
gttcaggtcacggggatcagcgaggagcagctcttggtcacggtgctcccggggtttccg
accacggccgagctcttcatcgtgccggagaggagggtgaagcacgggagcgcggaagag
aggcgggcacacgtggaccagctttcacaggtcctgctaagtgctctgaaccaggacctc
gtccagttcacactcaaacccggcctgcgggtcaacgtgtacgcgacgcggctgtctccg
gctcctctggtggacgccagtgacggcgtccacagcagcaccgcagtcatcatgctggtg
tcggtggtgctgatgggcctggccatctttgtcgtatataaatttaaaaggaagattcca
ggcatcaacacgtacacagcagaacagccagagaaagaacaagaggtcatccccacggtg
acctccatcgacgtcccaaaccccgagggagagaggctgacctcgctggagcgcgtggat
gctcagccggactcaaaaagcagaggctacctgccatctcacacagacatcaagctcccc
gatgaagcgccccatgtgttttaa
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