Entry |
|
Symbol |
vcam1
|
Name |
(RefSeq) vascular cell adhesion protein 1
|
KO |
K06527 | vascular cell adhesion molecule 1 |
|
Organism |
tru Takifugu rubripes (torafugu)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tru00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101065624 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:tru04515]
101065624 (vcam1)
04090 CD molecules [BR:tru04090]
101065624 (vcam1)
04091 Lectins [BR:tru04091]
101065624 (vcam1)
Cell adhesion molecules [BR:tru04515]
Immunoglobulin superfamily
VCAM
101065624 (vcam1)
CD molecules [BR:tru04090]
Proteins
101065624 (vcam1)
Lectins [BR:tru04091]
I-type lectins (Siglecs)
101065624 (vcam1)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
20:16698372..16703470
|
AA seq |
824 aa
MQQISMFDRGVLQIISALLLMSSCCVRGLHVDLFPKRPLLKLGERQQLVCRVQDCLGVLS
VSWSSLEDRPLTATTTTNESHSVLTFDPVMIEHEGALLCRVNCGGEGRQVKTSVHVYSFP
SAPVISGGDHLTLGEESTLSCQVSGVYPAELITLTLIKGDAVLQSTTGEPGTSLVQSRYL
LQPEKGDTGAQITCRATLDLQDLLFEERIKESSVTLNVLYAPIVMVTSHSVVVTTGAPLN
LTCLAEGNPKPTISWSLRRESGRSEGRSQNGQLVLLSVSPADAGFYVCEATNTKGSQSAD
VELLVHAPPTNISLTVSPGEEVLEGQNVTFTCRSDGVPPATLVLKKEGVELERTDPASDP
ELTFSLSALMDDSAQYQCEASNQYGTQVVTRSISVRAHPLQVELSPTAPVVEQGSGLVLT
CRSSGCLQRPIWTWRWLEHSHNQEQDQEQDPKWSVLQKSHAQDGESVLHLQNMDFLDQGE
YSCEARCDNVVRYKTTHIQVLSVLPDPLLEDPGPVLLDSEAVFHCDVTNVFSVNLIRIQW
KIGNTVMKTETFKFFGFSQNISSVLYLEIKDDHRFLSCKAELLTKDGSVWSSKMAGVLLE
VHYPPRRTSLSVRPEEEVLEGQNMTFTCRSDGVPPTTLVLKKEGVELYRKGPAPELTFSL
CSALMDDSAQYQCEASNQYGSQVVTRTVSIRAPPRDTTVLILPSAVVPEGENVTICCHTI
SFPLPTMVLKKLANGIEQHSSTGTFVLVNVKARDSGLYQVNVTNSLGHQVRVFSLSVTER
STLGAVTITLVCVAAALVAAALLLSYIRRSKKKGFYQLPRSSSA |
NT seq |
2475 nt +upstreamnt +downstreamnt
atgcagcagatctccatgtttgaccgcggagtgcttcaaataatttcagctttgctgctg
atgtcatcatgttgcgttcgtggccttcacgtggacctgttccctaagcggcccctgctg
aagctgggtgagcggcagcaactggtgtgtcgggttcaggactgtctcggggtgctcagt
gtgtcctggtcgtccctggaggaccgccccctcaccgccacgaccacgaccaatgagtcg
cactctgtgctgacctttgacccggtgatgattgaacacgaaggggcactattgtgtcgg
gtaaactgtgggggggaagggaggcaggtcaagacctcggtacatgtatactccttccca
tcagcccctgtgatcagtggaggtgaccacctgacgttgggggaggagtccacgctctcc
tgccaggtgtctggtgtgtaccctgcagagctgatcacccttaccctgattaaaggggac
gctgtcctgcaaagcactacgggagaacctggaaccagcctggtccaatccagatacctg
ctgcaaccagagaaaggtgacaccggggcccagatcacctgcagggccacgctggacctg
caggacctgctgtttgaggagaggatcaaagagagcagcgtcactctcaatgttctctat
gctcctattgtcatggtaacgtcgcactctgtggtggtgacgaccggtgctcctctcaac
ctaacgtgtctggcagaaggaaacccaaagccgacgattagctggagcttaaggcgagag
tcgggtcggtccgaggggcggagccagaacggtcagctggttctcctgtcggtgagtccg
gctgatgctggattctatgtttgcgaggctacaaacacgaagggaagtcagagtgcagat
gtggagctcctggttcatgctccgcccaccaacatctccctgacggtgagcccaggtgag
gaggtgttggagggtcagaacgtgaccttcacctgccgctcagacggagttcctcctgcg
acgctggtgctgaagaaggagggggtggagcttgagcggacagaccctgcatctgaccct
gagctgaccttcagtctctccgccctgatggacgactccgcccagtaccagtgtgaagcc
tccaaccaatatgggacccaagtggtcactcgctctatcagtgtcagagctcatcctctg
caggtcgagctttctcccacggctccagttgtagaacaaggttctggtttagttctgacc
tgtagatcttcaggatgtctgcaacgtcccatctggacctggaggtggctagaacacagc
cacaaccaggagcaagaccaggagcaagacccgaagtggtcagtactccagaagtcacat
gctcaggacggcgagtcagtgctccacctgcagaacatggacttcctggatcagggtgaa
tacagctgtgaggccaggtgtgacaacgtggtccggtacaaaaccacccacatccaggtt
ttatcggtcctgcctgatccacttctggaggatcctggtcctgtccttctggattcagag
gctgtctttcactgcgacgtcaccaatgtcttttcagttaatctgatcaggatccagtgg
aagattgggaacaccgtgatgaagaccgagacgttcaagtttttcggtttctcacagaac
atctcatccgtactttacctagaaatcaaggacgatcatcggtttttgtcctgtaaagcg
gagctgctgacgaaggatggcagcgtgtggagctccaagatggctggcgtcctgctggag
gtccactatcctccacggagaacctccctgtcagtgagaccagaggaggaggtgctggag
gggcagaacatgaccttcacctgccgctcagatggagttcctcccaccaccctggtgctg
aagaaggagggggtggagctttacaggaaaggccctgcacctgagctgaccttcagcctc
tgctccgccctgatggacgactccgcccagtaccagtgtgaagcctccaaccaatatgga
tcccaagtggtcactcgcaccgtcagcatcagggctcctcccagggacaccacggtcctc
atcctaccctctgcggttgttcctgagggagagaacgtcaccatctgctgccacaccatc
agcttccctctacccaccatggtcctgaagaagctggccaacggcatagagcagcactcc
tccaccgggaccttcgtcctggtcaacgtgaaggccagggactcgggcctgtaccaggtc
aacgtgaccaacagcctgggccaccaggtgcgagtgttcagcctcagcgtgacagagagg
agcactctgggcgccgtcaccatcacgctggtgtgtgtggctgctgccttggtggccgct
gctctgctgctcagctacatcaggaggtccaagaagaaaggcttctaccagctgccccgg
tcctcttcagcctga |