KEGG   Takifugu rubripes (torafugu): 101065628
Entry
101065628         CDS       T02386                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tru04812]
    101065628 (katnb1)
Cytoskeleton proteins [BR:tru04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101065628 (katnb1)
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SCAP eIF2A PEP5_VPS11_N Beta-prop_RIG_1st Beta-prop_LRRK2 Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_DCAF12 WDR54 Beta-prop_VPS8 WD_LRWD1 VPS8_N Beta-prop_NWD2_C PROPPIN Ge1_WD40 Beta-prop_IFT122_2nd Cytochrom_D1 VPS11_N PD40
Other DBs
NCBI-GeneID: 101065628
NCBI-ProteinID: XP_003978406
Ensembl: ENSTRUG00000003894 ENSTRUG00000021386
UniProt: H2S9V8
LinkDB
Position
13:10826559..10832064
AA seq 684 aa
MAAANTTKISWRLQKFEAHSSTVSCLALGKNSGRLLATGGHDCRVNLWAVSKANCIMSLT
GHKSPVECVQFSMSEDQIVTGSQSGSIRVWDMEAAKIVKTLTGHKSSISSLAFHPFQGFL
ASGSMDTNIKLWDFRRKGHVFRYTGHTQAVRSLAFSPDGKWLASASDDGTVKLWDLMQGK
TITEFTSHTAAVNIVQFNPNEYLLASGSSDRTVKLWDLEKFKMISSMEGNTTPVRCVCFS
PDGDCLYSGATDCMRVFGWEPDRCFDVVTAGWGKVSDLAICNQQLIGVSQQLSTVSSYVV
DLKRVKKSGGSLLHGVTHDDQPAAEPKDPKGSVLRRSYERPSTGCSSQRVKQRCDADRWS
PEGERRSPSEDEADEKVSAAEIYNAEDYKEIFQPKNAISRTPPRMSEPFPAPPDDESISG
SEPHPKDKSSLLPDKQQRVEPTGECPAPSTVNPAPSNHLAAALPPPQPPAPVKVKTQPKV
ILSVRNDPIGLNVSDFLPLAPSNRGGALSDAEALSQITKGHDTMCVMLSSRHKNLETVRT
VWAREDIKRALDAAVSMNDLSIVVDILNIINLQASLWKLDLCMTVLPQIEKLLTSKYESY
MQTGCTSLKLIMRHFWTLISDTLKATPSVGVDITREERHQKCRTCCRQLKNLSNVVKNRA
VQVGRHGSAFRELQLLMLPLEDVL
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggctgctgcaaacaccaccaagatatcatggcgcctgcaaaagttcgaggctcactcc
agcacggtttcctgtttggcgttggggaaaaactccggccgcctgctcgccacaggagga
cacgactgcagggtgaacctatgggccgtcagcaaggccaactgcatcatgagcctgact
gggcacaagagtccagtggagtgtgtccagttcagcatgtcggaggatcaaattgtcact
ggttcccagtccggatccatacgagtctgggacatggaagctgcaaagattgttaaaact
ctaacgggacacaaatccagcatcagcagtttagccttccacccctttcaaggattcctg
gcttcaggctccatggatacaaacatcaagctgtgggacttcaggaggaaaggacacgtg
ttcagatacacgggtcacactcaggcagtaaggagcttggccttcagtccagatgggaag
tggttagcttctgccagtgatgatggcactgtgaagctgtgggacctgatgcaggggaag
accatcactgagttcacgtctcacaccgccgccgtcaacattgtccagtttaatcccaac
gagtacctgctggcctcaggaagctctgacaggactgtaaagctgtgggatctggagaag
ttcaagatgatcagctccatggagggaaacacaacgcctgtcaggtgtgtatgtttcagc
ccggatggtgactgcttgtacagcggagccactgactgcatgcgtgtgtttggctgggag
cctgaccgctgctttgacgtggttacggctggctgggggaaggtgtctgacctggcgatc
tgcaaccagcagttgatcggcgtgtcccagcagctctccactgtgtcgtcttatgtggtg
gatctgaagagggtgaagaagagcggcggatccctgctccacggcgtcacccatgacgac
cagccagccgcagagcccaaggatcctaaaggatctgtgctgcgccggagctacgagagg
ccgtccacgggctgcagctcgcagagggtaaagcagaggtgcgacgccgataggtggagc
cccgaaggtgagaggcggagccccagcgaggacgaggcagacgaaaaagtgtcggcggcg
gaaatctacaacgcagaagattacaaggagatattccagcccaaaaacgccatctctcgg
actcctcccaggatgtcggaaccgtttcccgctcctccagacgacgagagtatttcaggg
agcgaacctcatccaaaggacaagagttctcttcttcctgacaagcagcagagggtggag
cccacaggggagtgccctgccccttccactgttaaccccgccccctccaaccacctggcc
gctgccctgcctcctcctcagcctccagcaccggtgaaagtcaaaacccaaccaaaggtt
atcctgagcgtgaggaacgatccgattggactcaatgtgtccgacttccttccgttggcg
cctagcaacagaggcggggctctgagcgacgccgaggctctgtctcagatcaccaagggc
cacgacaccatgtgcgtgatgctgagcagccgccacaagaacttggagacggtccggacc
gtgtgggccagagaggacatcaagcgcgctctggacgctgccgtctccatgaacgacctg
tccatcgtggtggacatcctcaacatcatcaacctccaggcgtcgctgtggaaactggac
ctttgcatgacggttctgccccagatcgagaagcttttgaccagtaaatatgagagctac
atgcagactggttgcacatctctgaagctcatcatgaggcatttctggacgctgatctcg
gacacgttgaaggcgacgccctctgttggtgtggacatcacgcgggaggagcgacaccag
aagtgcagaacgtgctgcagacagctgaagaacctgagcaacgtggtgaagaacagggcg
gtgcaggtcggtcgccacggcagcgccttcagggagctgcagctgctcatgctgcctctg
gaggacgtcctgtga

DBGET integrated database retrieval system