Takifugu rubripes (torafugu): 101065741
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Entry
101065741 CDS
T02386
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101065741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101065741
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101065741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF1919
Motif
Other DBs
NCBI-GeneID:
101065741
NCBI-ProteinID:
XP_029692233
Ensembl:
ENSTRUG00000006429
LinkDB
All DBs
Position
5:complement(6369936..6372865)
Genome browser
AA seq
523 aa
AA seq
DB search
MTSKENSNLSVTEYTVRIAKNTGKKYNIMAFNAGDRVDSSTWTQAQMERDMSARQFSEEQ
KVPESRPGSEFGRKQCGESRRKKFGIEKREFKAEDQPWILNVNGKEGRRFKGQKRGGVTE
HASYYIFKKTSEGEFEIFPVNSWYNFTPISKHRTLTTEEAEEKWSRRNKVVNHFNIMVQQ
RLQDDQGEDEEEESEKSGKKKGGEKGGDLRIHDLEEELEMSSEDSDWSAGEEGENKKPKK
TSVKGKGKKKKRKDDREALEDSDDGDYEGLEVDYISDESSSEEEPEKENPNKGEDVPKGI
DEASESEEESEEEKQNSEESEEEQEVEEGKKTDSSGESDSFDDSDIEGEATSALLMKKRI
PPKRGGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQGAGKLIKASKRQAPGPD
CPAAKRLKMEPSSQSPGPSGKSTPQPPSGKSTPSSSNIQLAEKVIQRSLMRRPMTTKDIL
KKFQTKCPGLSKEQTIEVLQQIMKRLKPERKVMNDKMHFYLMK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaaggaaaacagcaatttatcggtcacagaatacacagtccgaattgcaaaa
aacactggcaagaaatacaatattatggctttcaatgctggggacagggtcgactcttca
acgtggacacaggctcaaatggagagagacatgagtgctcgtcagttctctgaagagcag
aaggtgccagaaagtagacctggtagtgagtttggcagaaagcagtgtggagaatctcgg
cgaaagaagtttggcattgagaaacgtgagttcaaagcggaggaccagccctggattctc
aatgtcaatggaaaagagggcaggaggttcaaaggccaaaagaggggcggggtcacagaa
catgcgtcctactacatcttcaaaaaaacctctgaaggggagtttgagatcttcccggtt
aacagctggtacaacttcacaccgatatccaagcacaggactctgacaacagaggaggct
gaggagaagtggagcaggaggaacaaagtggtgaaccattttaacatcatggttcagcaa
cggttgcaggacgaccagggcgaggatgaggaagaggagagtgagaagtctggaaagaag
aagggtggcgaaaaggggggcgacctgcgcattcatgacctggaggaagaactggagatg
agcagcgaggacagtgactggagtgctggagaagagggagaaaacaagaaacctaaaaaa
acctcagtcaaagggaaagggaagaagaagaagaggaaggatgacagagaggctctggag
gacagtgatgatggtgattatgagggcctggaggtggattacatatctgatgaaagcagc
tcagaggaagaaccagaaaaagaaaaccccaacaaaggagaggatgtccctaaaggaata
gatgaggcgtcagaaagtgaggaagagagtgaggaggagaagcagaacagcgaggaatcc
gaagaggagcaggaagtggaggaaggaaagaaaacagacagcagtggcgagtcggacagc
tttgatgacagtgacattgagggagaggcgacctcagctctgctcatgaagaagcgcatc
cccccgaaacgtggaggtggccgcggctccgcaggcagctccaggaccggcagtcgccca
gggacaccgtctatagactctgcctccacctccaatacgctccgagctgctgccagcaag
ctggaacaaggtgccgggaagctgattaaagccagtaagaggcaggctcctggccccgac
tgtccagctgccaaaagactgaaaatggaacccagcagtcagagcccagggccgtctgga
aagagcaccccacaacccccatcaggcaaatctactcccagctcaagcaacattcagctg
gcggagaaagtcatccagcggtccctgatgcggagaccgatgaccaccaaagacatcctg
aagaagttccagacaaagtgcccggggctgagcaaggagcagaccatcgaagtcctgcaa
cagatcatgaagcggctcaaaccagagcgaaaagttatgaatgacaagatgcacttttac
ctgatgaagtaa
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