Takifugu rubripes (torafugu): 101066022
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Entry
101066022 CDS
T02386
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04145
Phagosome
tru04814
Motor proteins
tru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101066022
09142 Cell motility
04814 Motor proteins
101066022
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101066022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
101066022
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tru04812
]
101066022
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
101066022
Cytoskeleton proteins [BR:
tru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
101066022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
WD40_RFWD3
Nbas_N
Beta-prop_IP5PC_F
Neugrin
Motif
Other DBs
NCBI-GeneID:
101066022
NCBI-ProteinID:
XP_003961964
Ensembl:
ENSTRUG00000017770
LinkDB
All DBs
Position
1:complement(19545512..19559287)
Genome browser
AA seq
626 aa
AA seq
DB search
MSDKSEIKAELERKKQRLAQIREEKKRKEERKKKEADQQKDAVLHQDDSDLEKKRRETEA
LLQSMGITSEIPVVPPPVSPTTKSAGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSDS
ELGRQTPKLGMAKVTQVDFPPREIVSYTKETQTPVVTQEKEEEEEEEEIAPAPPLGEPQT
EIPDQKVEEEVPPHELTEEEKLQILHSEEFANFFDHSTRIIERALSEHVDLFFDYSGRDL
EEKECEIQAGAKLFLNRQFTDEHWSKHRVVTCLDWSPQYPELLVASYNNNEDAPHEPDGV
ALVWNMKYKKTTPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQR
TPLSAAAHTHPVYCVNVVGTQNANNLISISTDGRMCSWSLDMLSHPQDSMELVFKQSKAV
AVTSMSFPHGDVNNFVVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGINCHTAPGPLD
FSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLW
NLNNDTEVPTASVTVDGNPALNRVRWAHSGREIAVGDSDGRVYIYDVGEQIAIPRNDEWT
RFVRTLAEINENRDDAEELAAQRLAV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgagataaaagcagagcttgagaggaagaaacagcgcttagcacaa
atcagagaggagaagaaaagaaaagaagagcgtaaaaagaaagaggctgaccaacagaaa
gatgctgtacttcatcaagatgattcggacctggagaagaaaagacgtgaaactgaagct
cttcttcagagtatgggcataacctcagagatccctgttgtccctccccctgtctctcca
acaactaaatcagcgggcacaccaagtgaggccggaagccaagactctgatggcgctgtg
ggacccaggactctacactgggactctgacccgtccactcttcaacttcactctgattca
gagctggggcgtcaaactccaaaactgggaatggccaaagtcacgcaggtggacttcccg
ccgcgggaaattgtgtcctacaccaaagagacgcagacacctgtcgtgacccaggaaaaa
gaagaggaagaagaggaagaagaaattgctccagctccaccattgggagagcctcagact
gagattccagaccagaaagtggaggaggaagtgcccccccacgagctgacagaggaggaa
aaactccagatccttcactcggaggagtttgccaatttctttgaccacagcacacgcatc
atcgagcgggctctgtcggaacacgtggatctcttctttgactacagcggccgcgacctg
gaggagaaggagtgtgaaatccaggctggtgcaaagctgtttctcaacaggcagttcaca
gacgagcactggtccaaacaccgcgtggtcacatgcctggactggtctccccagtatcct
gaactcctggttgcctcatacaacaacaatgaggacgctcctcatgagcccgacggcgtg
gccttggtgtggaacatgaagtacaagaagaccacacctgaatatgtcttccactgtcag
tctgctgtcatgtcggctgcatttgccaagttccaccccaacgttgtggtcgggggaaca
tactcgggccagattgtactgtgggacaacagaagcaacaagaggacgcctgtgcagagg
acacccctgtcagcggcagcacatacgcacccagtttattgtgtcaatgtggttggcacc
cagaatgctaacaacctgataagcatctccactgatggcagaatgtgctcctggagtctg
gacatgctttctcatccacaggacagtatggagctggtgttcaagcagtccaaagctgtc
gctgtcacctccatgtcgttccctcacggagacgtcaacaattttgtggtgggcagcgag
gacggctccgtctacatggcgtgtcgtcatggaagcaaagcaggcatcagtgagatgttt
gagggccaccatggacccatcacagggatcaactgtcacacagcaccggggcctctggac
ttttcccacctgtttgtcacttcttctttcgactggactgtcaagctgtggagcactaag
aacaataagccgctctactcctttgaagataactcggattatgtctatgatgtcatgtgg
tctcccactcaccctgctctgtttgcatgcgtggatggagtgggtcatctggacctgtgg
aacctcaacaatgacactgaggtcccaactgctagtgtcacagtagatggtaacccggcc
ctgaacagggtcagatgggctcattctggcagagaaattgccgtgggagattcggatgga
cgagtctacatttatgatgttggagagcaaattgccataccgcgaaatgacgagtggacc
cgattcgttcgcacactggcagagattaatgagaacagggacgatgcagaggagctggct
gctcagcgtctggctgtctag
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