Takifugu rubripes (torafugu): 101066135
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Entry
101066135 CDS
T02386
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101066135
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
101066135
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tru04515
]
101066135
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101066135
Cell adhesion molecules [BR:
tru04515
]
Cadherins
Protocadherins
101066135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
AP3D1
Motif
Other DBs
NCBI-GeneID:
101066135
NCBI-ProteinID:
XP_029703062
Ensembl:
ENSTRUG00000008100
LinkDB
All DBs
Position
14:4505731..4613687
Genome browser
AA seq
1264 aa
AA seq
DB search
MDIASRATVLVALLACLVLPCLSQERDYTVKEEQPENVRIGNLRRDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTYVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFKDSELEVAVPENAPMGTSVAQLHATDADLGSNAQIHFTFSNQISASTKRHF
SIDGATGLITVKQPLDRELTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPTIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNVPIFPQPEIQFSIPENND
PSTELIKLSATDADSGRNAEIIYTLGPDAPDGFNVDRRSGILSVGKRLDREKQERYVFTV
IAKDNGSTSLQSNVTIRLIVQDLNDNSPAFTHPEYNFYVPENLPLFGTVGLITVTDADSG
DNAIVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVYAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKSTGNITLQEKIVAADQGLHRLVVKVRDLGQPESLHAITLVHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTAQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKKRKKRSPKSLLLNFVTIDESKPDD
PTHEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETP
VAPKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECGCQGGFKTAGQITTRQNLS
PTPEKSFNSPPPICPHKEACQLGKITSMNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTA
STAQTLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNMQKALAEASETCTQECLILG
HSDSCWMPPALAQFQSPGSNSPTSTPVAASIAGTMPTFGFQPSFAQGAKASMGLMDGRHT
LGRSVPRKDELDKGINRPQFYNTLDRHCSSKKEEPVKVIPLASFSSSEQTTGGGSGSFLH
EHQL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggacatagcaagtcgggccaccgtgctggtggccttgctggcctgcctggtcttgccg
tgcttgtcccaggagagggactacacggtcaaggaggagcagcccgaaaacgtacgcatt
ggcaatctgcgcagggacctggacctcaacctggaccccaacatcaggctgtcctccccg
ctgcagttcaaacccgtgtacaagacgggcgacgtgcctttggtgagggtggaggccaac
acgggggagatcttcaccactaaccacagaatcgaccgggagaagctctgctccggggtc
ttcgctgagaaacgctgctactatgagatcgaagtggccgtgctgcccgacgagatcttt
cgattggtcaagatccgcttcctgatcgaggatgtaaatgacaatgcgcctctttttcag
tccacggtaataaatatctccatcccagagaatacagcgatcaacactcgatacccggtg
ccctcggcgtttgacccagatgtaggaatcaatggaattcagcattatgaacttgtcaag
agcgtcagcgagttcggcttggacattatcgagacccccgaaggcgacaagtggccacag
cttatcgtgcaacagaacctggatcgtgagcagaaagacacctacgtcatgaagatcaag
gtggaggacggcggcaaccctcccaagtccagcaccgccatcctccaggtcaccatctcc
gatgtcaacgacaaccgtcccatcttcaaggacagtgagctggaggtcgctgtgcctgag
aatgcccccatggggacgtcggttgcccagcttcatgccacagatgcagacctgggttcc
aatgcgcagatccacttcaccttcagcaaccagatctctgcctcaaccaagcggcacttt
tccattgacggcgccacaggactgattaccgtgaagcagcccctggacagggagctgact
cctgttcataagctcatcgtcctcgccagcgatggcagctccaccccctccagagccact
gtgattgtcaacgtaacagacgtcaacgacaacgttcccaccatcgacacccgctacatc
atcaacctggtgaacgggaccgttctgctctctgagaacgcgccgctcaacacaaaaata
gctctgatcactgttaccgacaaagacgcagatctttatggaaaagtggcctgctacact
gaccacgatgttcctttccggctgaagcctgtcttcaacgatcagttcttactggagacg
gctgcccccctcgactacgagacgactcgagaatacgcaattaagattgtggcatcggat
agaggaacgcctcctttgaacacttcggctatggttttaattaaaatcaaagatgaaaac
gacaatgtgcccatcttccctcagccagaaatccagttctccatcccggagaacaatgac
ccctccacagagctaataaagctcagtgccactgatgcagacagcggacgtaatgcagag
attatttataccctcggccctgacgcacctgacgggtttaacgtagacaggcgatcagga
atcctttctgttggcaaacgcctggacagggagaagcaggagaggtacgttttcactgtc
atagcaaaggacaacggctctacatccctgcagagcaacgttaccatcaggctaattgtt
caggacctgaacgacaacagtccggctttcacacaccccgagtacaacttctacgtcccc
gaaaacctccctctctttggaaccgtggggttgataacggtgacggatgcagattctgga
gacaatgcaattgtgaccctgtccatattgaatgggaaagataatttcatcatcgacccc
caaaccggggtgatcaaacccaacatcacctttgatcgggagcagcaaagctcctacacg
ttcatggtcaaggcggtggacggcgggcagccgccaagctcctcctacgccaaggtcacc
atcaatgttgtcgacgtgaatgacaatcgccctgtttttgttatcccgtcctccaattac
tcatacgacctggtgcggaccaccaccacccccggcgccgtggtcacaagagtttacgca
attgacaatgacacaggtatgaatgcggagctgcagtacagcattatcagcagcatcatc
atcacatctcgggtctcaccccgaggtcttttcgccatcgacaaatcaacgggtaacata
acactgcaggaaaaaatagtcgcggctgatcaggggctacacaggctggtagtcaaggtc
agagatctagggcagcctgaatcattgcacgccattacgctcgttcacttgtttgttaac
gacaccgtgtcaaacgctacattcatccaagaacagctgcgaaaaagtatggagacgccc
ttggaccgtaatatcggagacagtgaggtaactgctcaagccaatggatatgtaattgtt
gtcattgctataatagcggggaccatgactgtcatcttagtgatatttgtgactgcgctg
gtgcgctgtcggcagacacccagacacaaagtggtgcagaagggcaaacaaagcggcgag
tgggtgtcgcccaaccaagagaacaggcagatcaagaaaaagaagaagaaaaggaagaag
agatccccaaagagccttctcctgaactttgtgaccatagacgaatccaagcctgacgac
cccacccacgagcacgttaacggaaccctggacctcccagtggagctagaggagcaaacg
atggggaaatacaattgggccaccacacccaccaccttcaaacccgacagccccgattta
gccaagcattacaagtcggcgtcccctcagcccacatttcaaatcaaacccgagactccg
gtggccccaaagaaacaccacgtgatccaggagctccccttggacaacacttttgtcgtg
ggctgcgactcgctctccaagtgctcatcgactagctccgacccgtacagtgtctcagag
tgcggctgtcaagggggattcaagaccgcagggcaaatcactactcgacagaacctgagc
ccgacgccggagaaatcttttaactcgccgccgcccatttgtccccataaggaggcctgt
cagcttggcaagataacctccatgaacacccagcggcgcgtgacattccatctcccagac
ggatcccaggagagctgcagcgacagcgggctgggggacccggagcccagcagcacagcc
agcaccgcccagacccttcccctcagcttcccccaggaggagtactacgagcaaacatca
cccaacagccgcactgagggagacggaaactccgaccctgaatcaactatcgaggtgaac
atgcagaaagctttggctgaagcctccgagacctgtacccaagagtgtctgatactgggc
cactccgacagctgctggatgcccccggccctggcgcagttccagagccccggtagcaac
agccccacgtccacccccgtcgccgcctcaatcgccggtacgatgcccacatttggtttc
cagccgagctttgcccagggagccaaagctagcatggggctcatggatggtcgccacacc
ctgggtagatccgtgcccaggaaggacgaactggacaaagggatcaatcggccgcagttc
tacaacaccctggacagacactgcagcagtaagaaggaggagcccgtcaaggtcattccc
ctggcgagtttctcctcctctgagcagaccaccggcggaggcagcggctccttcttgcac
gagcaccagctgtaa
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