Takifugu rubripes (torafugu): 101066212
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Entry
101066212 CDS
T02386
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101066212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101066212
03036 Chromosome and associated proteins [BR:
tru03036
]
101066212
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101066212
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101066212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101066212
NCBI-ProteinID:
XP_011609800
Ensembl:
ENSTRUG00000021385
LinkDB
All DBs
Position
15:12755830..12770776
Genome browser
AA seq
1854 aa
AA seq
DB search
MICSQETIRTISVIDVDWDISAAMLSKSSSKLNVLVNKLHEYLAHSTIEDNKHNAASQDV
DGLANRCSAENTTGRAVTEAQLHARYSRRKPSVVIRHSGLDESGDSNASESSEPLLNANG
HLDVASLPKGTVLVQPEPADNGRDGFRGPEFCSRKPNVLSRRRGGGEHMEIVSCTACGRQ
INHFQRDSLFRHPVLKVLVCKACYKYYLSDDISKDGEGMDEQCRWCAEGGNLICCDFCNN
AFCKKCILRNLGRKELSNVVASNWYCYVCNPEPLFGLVTACNKILENMESLFSQQRRQNR
VERLPQNIPLDKWDHTGMDGNVIFNYSTLQVSKDATKTAKHLIDSTNFLNRTFVTFIHTV
TNKRTPEVRNLYLNAFLSVVKGLRKSLSALEESLKEEFNDLDVASCWERFLGDNANTQTA
TEADVELTIADERCLCDLQKLAAEHLMDDDSNPKCFAEGKQAPPGIGESMNNSGDPESRL
KPSESGVSMTKKLVVKLTPVTMNREPTADSSQKMYMNEKSGSLSRSEDKPSDSKMYKSSM
SLHAEESGTRRSPRLKITPLRRPSDIKAKCSFSAANSDSDSSQEETSNSLAADNSEVQSL
NGMRDNSDSDEVPIALINRAALAQSSDEPQSEEDGDKVPAKVAKKCIFWLNKSSPKLPEK
TRRKRKLLDRSPESLSGSRRVKLWRERRTESSSDDQDSQEDAHCSREKPVKRGEKGSDRI
QAGTAEAKAGQETTSSSSEDVHDDSSSDDQKIKPITEEVALMGAAAFHQSSGDEEPSESG
PLWTAEDDDDPENRIAKKILLAQIKANLSSSDDMSWDEETQADESQSDGDREVREGDEKN
ATVGDAGEDIASDSSLSGSCKAGAGHWLLKHKLSLDEGSSRDKAASDRKGGRLAQEEQSS
DGATEDEAEESEPDDGWMSDEMSLSEGEISVDEPKSEVEEDLKSSEQKQPEPYILLSDSS
EQSGKEDSNDESSIKGTPRGRRKIRRIIDDENLRSETQEALREEEERCKRLAEREQQMED
RREVFEGSCAITTKLILDQDEETKTPLVQVHRNLVTRLKPHQVDGVQFMWDCCCESVKKT
KSSHGSGCILAHCMGLGKTLQVVTFFHTVLLSDNLTFRTALVVCPLNTVLNWVYEFEKWQ
RNVGSDRVNVGHLVAVKNLSDRLAALQKWYREGGVMVMGYELYRILSLAPKTNDEASRKE
LKRILVDPGPDFVVCDEGHMLRNNGSRISKALNAIKTRRRVVLTGTPLQNNLVEYHCMAN
FIKNNLLGSLREFRNRFINPIQNGQCADSTSKDVRLMKKRAHVLHAMLAGCVQRKDYSVL
AEFLPPKQEYVLAVRITPLQYKLYRHYLDHITTVGSMTANIRGRTGANLFKDFHALSHIW
NHPWCLQLNWERKEKSRKSQEAAKSSDQMRWEGAAVAQSEVGENKGDQGFVSGSTEAPAV
KGASDENKGWFRNLLTEADGKIMEHSGKMVLLFKILRLAAELEEKVLVFSQSLFSLDLIE
TFLQTSHSLAMPSLANASSFNKNVNYFRIDGSVGAELRKKWTDEFNDAPNSRCNLLLLST
KAGSLGINLVAASRVVIFDASWNPSYDVQSIYRVYRFGQVRPVFIYRFLAQGTMEEKIYD
RQVTKQSLSNRVVDQQQIERHYTLHELTELYTFTPDLLHEPNSQKSRRSSSAVPKEKIIT
ELLKSCKDQIVSFHEHDSLLDHKVEEELSESERKAAWAEYKAESATAANPLGLSQSEDNL
DTKTDVQLVELLNKTRVTVTNAFLSLNNLRSHSLEEYMSQTRQQYPHLSEEEVKIKGQVW
KTWDEKEQERRRAFCQDVLQHQRDLTCRIDTILKSRRTEGMQASMKTVNQPGQT
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcagtcaggaaactataaggaccatttcggttattgacgtggattgggatatt
tctgcggcaatgctgagtaagtctagcagcaagctgaatgtgttggtcaacaaactacac
gagtatttggcccactccaccattgaggacaacaagcataatgcagcctcgcaggatgtg
gatggtctggcaaacagatgctctgcagaaaacacaacaggtcgagctgtgacggaggca
caactgcatgccagatactcaagaagaaaaccctctgtggtgataagacactcggggctg
gatgaatctggggactcgaatgcaagtgaaagttcagaacctctgctcaatgcaaatggt
cacctggacgtcgccagtttgcccaaaggcacagtcctcgtgcagcctgaacctgctgat
aatggaagagatggcttcaggggtccagagttctgcagcaggaaaccaaacgtgctctca
agaagacgtgggggaggcgaacacatggaaattgtcagttgcactgcatgtggtcggcaa
attaaccacttccagagagattctctcttccgacatcctgtgttgaaagtacttgtctgt
aaagcgtgttataaatattatttaagtgatgacatcagtaaagatggtgaaggaatggac
gagcagtgcaggtggtgcgctgaaggaggcaacctgatctgctgcgacttctgcaataac
gccttctgcaaaaagtgtattctgaggaatttgggaaggaaagaactatccaatgtcgtg
gcaagcaactggtactgctatgtgtgcaacccagagccgctctttggtctggtgacggcc
tgcaacaaaatcctggaaaacatggagagcctcttttctcagcaacgcaggcagaaccga
gtggaacggcttccgcagaacattcctttagataagtgggatcataccggcatggatggg
aatgtcattttcaactacagcacgctgcaggtttccaaggacgctaccaaaacggcgaaa
catttaatagactcgacaaactttttaaaccgaactttcgtcacgttcattcataccgta
acaaacaaacgaacaccagaggttcggaatctgtacctgaatgcttttttgtcagtagtt
aaagggttgcgaaagtcactgtcggctctagaggaaagtctgaaggaagaattcaatgat
ttggatgtggcgagctgttgggagaggttcctgggggacaacgccaacacacaaactgct
acggaagcagacgtagagttgactatcgctgacgaaagatgcttatgtgacttgcagaaa
ttggcagcggaacatctgatggatgacgattcaaatcctaaatgtttcgcagaaggaaaa
caggcacctcccggcattggggagagcatgaacaattccggggatccagagagtcgcctg
aaaccttcggaaagtggcgtcagcatgactaaaaaactagtggtaaaacttactcctgta
actatgaacagggagcccactgctgactcttcccaaaaaatgtacatgaatgaaaagtca
gggtcactgagtcgatcggaagataaacccagtgacagtaagatgtacaaatccagtatg
tctttacatgcagaagagtctgggactcgacgatctcctcgcctgaagatcacacctctg
cgtcgacccagtgatattaaggccaaatgttcattttcagcagcaaacagcgacagcgac
tcttcccaggaggaaacctccaactcactagcagccgacaactctgaagtgcagagtttg
aacggcatgagagacaattcggactcggacgaagtccccattgcactgattaaccgggca
gcattagcacaaagctcagatgagcctcagagcgaagaggatggtgacaaggtccccgct
aaggtggccaagaaatgtatcttttggttgaataagagcagcccaaagttgcccgagaaa
actcgccgcaaacgcaagttgctggaccgttccccggagtcactctctggcagcagaaga
gtcaagttatggagggagagaaggacagaatcctcgagcgacgatcaagattcccaggaa
gacgcgcactgttcgagagaaaagcctgtcaaaagaggagagaagggctcagacaggata
caggccggaacagccgaggctaaagctggccaggaaacgacgtcctcatcgagtgaagac
gtccacgatgactcgagcagtgacgatcagaagatcaaaccaatcactgaagaagtggcc
ttaatgggggcagcagcattccatcagtcatccggtgatgaggagccctctgaatctggg
cccttgtggacagcagaggatgacgacgatccggaaaatagaatcgctaagaaaatacta
ttggcccaaatcaaagccaacctctcttcgagcgatgatatgtcttgggatgaggagacg
caggccgatgagtcacagtcagacggcgatcgggaggtcagagaaggagacgagaagaat
gctaccgttggagatgcaggggaggacatcgcgtcggactcgtccctcagcgggtcctgt
aaggccggcgcaggtcactggctactcaagcacaagctgtctttagatgaaggatcctcg
agggacaaggcggcatcggacaggaaaggagggaggctggcacaggaagagcagagctct
gacggcgccaccgaagacgaagctgaggagtcggagccggacgatggctggatgagtgac
gagatgagtctgtcggagggagagatcagtgtggacgaacccaaaagtgaagtggaggag
gacctgaagagttcggagcagaagcaaccagagccttacatcctgctgtctgactccagt
gaacagagtggtaaagaagattccaatgacgagtcgagcattaaaggcacgcccagaggt
cgcagaaagatccgccgaataatcgacgatgagaacctgcgttcggagacccaggaggcc
ctcagagaggaggaggagaggtgcaagcgcctggcagagcgggaacagcagatggaggac
aggagagaggtgtttgaggggtcgtgtgccatcaccaccaagctgatcctggatcaggat
gaagagaccaagacgcctcttgttcaggtgcaccggaacctggtgaccaggttgaagccg
caccaggtggacggagtccagttcatgtgggactgttgctgcgagtcagtcaagaagacc
aagtcctcgcatgggtcgggatgtatactggcgcactgcatgggcctgggaaagacgctg
caggtggtgacattcttccacaccgtgctgctgtcagacaacctgacgtttagaacggcg
ctggtggtctgtccactgaacacggttctcaactgggtttatgagtttgagaaatggcag
aggaatgtgggaagtgacagagtaaatgttggacatctggtggcagtaaagaatctctcg
gaccgtctcgctgctctgcagaaatggtaccgagagggcggggtcatggtaatggggtat
gagctgtaccgaatcctgtcactggcccccaagaccaacgacgaggcctcgaggaaggag
ctaaagcgcatactggtggatccaggtccggactttgtggtgtgtgacgagggacacatg
ctgcgcaacaacggctccagaatttccaaagctctgaatgcaataaagacgaggaggagg
gtggtgctaacagggacaccgctgcagaacaacctggttgagtatcactgcatggcgaat
ttcatcaagaacaaccttctgggctcactccgcgagttccgaaaccgcttcatcaacccc
attcagaacggccagtgtgccgattccacgtccaaagacgtccgactcatgaagaaacga
gcccacgtgcttcacgctatgctggctggatgcgtgcagaggaaagattattcagtgctg
gccgagtttctgcctcccaaacaggagtacgtgttagccgtgaggatcaccccgctgcag
tataagctgtaccgccattacctcgatcacatcaccactgtgggttccatgacggctaat
ataagggggaggacgggcgcgaacctcttcaaagattttcatgcactcagtcacatttgg
aaccacccctggtgtctgcagctcaactgggagagaaaggaaaaatccaggaaaagtcag
gaagcagccaaatcttcagatcagatgagatgggaaggagcggcggtagctcagagtgaa
gtgggagagaataaaggagatcaaggatttgtttctggttccactgaagctccagcagtc
aaaggggcctctgatgaaaacaagggatggttcagaaatctcttgacggaagctgacggc
aaaatcatggagcactcggggaagatggtcttgctgttcaagatcctgaggctggctgcg
gagctggaggagaaagtgctcgtcttcagtcagtccttgttctcattagatctgatcgag
accttccttcagacgtcccacagtctcgctatgccatcactagccaatgcttccagcttc
aacaagaatgttaattacttccgtattgatggcagcgtcggagcagagctccgaaagaag
tggacggatgagttcaatgatgcccccaacagcaggtgcaacctgcttctcctctccaca
aaagccggctcactcggcatcaacttggtcgccgccagcagggtggtgatctttgacgcg
tcctggaacccctcgtacgacgtgcagagcatttacagggtgtaccgcttcggccaggtc
agaccagtgttcatctatcgcttcctagctcagggcaccatggaggaaaagatctatgac
cggcaggtgaccaagcagtctctgtccaaccgagtggtggaccagcagcagatcgagagg
cactacactcttcacgagctgactgaactttacacgttcacgccagacctgctgcacgag
cccaactctcagaagagcagaagaagctcctctgctgtgccaaaggaaaaaataatcaca
gagctgctgaagtcctgcaaagaccagatagtgtctttccacgagcacgactctctgctg
gaccacaaggtggaggaggagctgagcgagtcagaacgtaaagctgcctgggccgagtac
aaggccgagtcagccaccgcggccaatccgctcgggctgagccagagcgaggacaacctg
gacaccaaaacggacgtgcagctcgtcgagctgctcaacaaaaccagagtgacggtgacg
aacgccttcttgtcgctgaataacttgaggtctcacagtctggaggagtacatgtcacag
acgcggcaacagtatcctcacctgtctgaggaggaggtgaaaatcaaaggtcaggtctgg
aaaacctgggacgagaaggagcaggaacgcagacgggcgttctgtcaggacgttcttcag
catcagcgggacctgacgtgccgcatcgacaccatcctgaaaagccgaaggactgaaggg
atgcaggcgtccatgaagacggtgaaccagcccgggcagacttga
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