Takifugu rubripes (torafugu): 101066281
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Entry
101066281 CDS
T02386
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03030
DNA replication
tru03410
Base excision repair
tru03420
Nucleotide excision repair
tru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101066281 (rfc1)
03410 Base excision repair
101066281 (rfc1)
03420 Nucleotide excision repair
101066281 (rfc1)
03430 Mismatch repair
101066281 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101066281 (rfc1)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101066281 (rfc1)
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101066281 (rfc1)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101066281 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
AAA_30
Rad17
AAA_18
RuvB_N
AAA_14
AAA_17
BRCT_2
RNA_helicase
AAA_33
AAA_7
AAA_16
nSTAND3
AAA_19
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-GeneID:
101066281
NCBI-ProteinID:
XP_003972215
Ensembl:
ENSTRUG00000008937
UniProt:
H2TCS8
LinkDB
All DBs
Position
17:complement(6465739..6472482)
Genome browser
AA seq
1157 aa
AA seq
DB search
MMDIRRFFVPSSSKPAAQRSPQNRDVKTDKKKLLSSDDDAKKKNQNASKVGGSKPQEKRR
NSGKKKRKKIAIIDSDSEDEDLVKKSKKSPKGKQKVSKKQSPPRKDPVQYVSETDSDSDT
FHTLKEVSKGKSTKSDVNGPQKGVKMGMKSPVTPASKVATSPVTPKSTQPPQPKQTPTSA
LDYFGKGTVQRSEKKLVASVKRKVPTQDSIELMSDKQRDDDMELEKQIHEDEEFGRTLAM
LDEEPQAKKARQGSEEETATSHKQNCSDSAVEKRGSLAKKGQRINTTQNASGPSPKKSPA
PVKTSSKLAMMKKRDESPGSKMTISPRKIKFSPRKEPIISSISDKKVAHKAETESASVKF
SPRKQESTTTSPEDSEKKKVNATAYRNYLNREGPRALGSKEIPQGAENCLEGCVFVLTGV
LESMERDETKSLIERYGGKVTGNISKRTTYLVQGRDSGVSKLEKAESLGTKILDEDGLLE
LIRTKPGKKSKYEIAAEAEIKASKTRTPSKASKSTPTAQKISPSKGNSTSPHTPSPSKTS
LAQGHTARTREARTPSGRGSAQTVRRELGLSSSNTSSSPPDTSVPRQTGGEVALLWVDKY
RPRSLKAVIGQQGEQSCANKLLRWLQNWHRHHAGGALKPPAAKFGKFGGKDDGSGYKAAL
LSGPPGVGKTTTASLVCEELGFSYVEMNASCTRSKNNLKDVVAESVNNTSIENFYKGTSQ
TVSNKHVLIMDEVDGMAGNEDRGGIQELIGLIKSSKIPIICMCNDRNHMKIRSLSNYCFD
LRFQRPRVEQIKAAMMSIAFKEGINIRPPALNEIILASNQDVRQVMHNLSMWSATDKVMS
YDQCKSDAAKARKDMKMGPFDVCRKVFAAGEETARMSLIDKSDLFFHDYSLAPLFVQENY
LNVRPAAAGGNLKSHLMLLSKAADSISDGDLVDKRIRSGQNWSLLPTQAIYASVLPGELM
RGYMSQFPSFPSWLGKNSSAGKHSRIVQELASHMSLKTMSSRSAVNLDYLHYLRHALLSP
LQRHGAEGASEAVQMLDDYHLIKEDVDSIMEISVWGNQPDLYSKLDPKVKAAFTRAYNKE
VHLTPYSLLAVKKNRRGGESEVGGVDMDNQAHESEEDGENLQTDAMIKQKKVKVGKQTKE
KEDSGKPKGKAKAKTKK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatcagacggttcttcgtcccgtcttcgtccaagcctgcagcgcagcggtcg
ccccaaaacagagacgtcaagacggacaagaagaagcttctctcctcggatgacgatgca
aaaaagaaaaatcagaatgcatccaaggtcggaggctcaaaaccgcaggagaaacgcaga
aatagtgggaaaaagaagcgaaagaagatcgctattatagattcagactctgaggatgag
gacctggtaaagaaatcaaaaaaatcacctaaagggaaacagaaagtgagcaagaaacag
tcccctcctagaaaagatcctgtgcagtatgtctctgaaacagattcggacagtgacact
tttcacaccttaaaagaagtctctaaaggcaagtcaacaaagtctgatgtcaatggccct
cagaagggagtcaagatggggatgaagtctccagtcacacctgcgagtaaagtcgcaacg
tcccctgtcactccaaagtcaactcaacctcctcaaccaaaacaaacacccacatctgcc
ttggactattttggcaaaggtactgttcagcgctcggagaagaaactcgttgccagcgtc
aaaagaaaagtgccaactcaggacagcattgaactgatgagtgataagcaaagggatgat
gacatggagctggaaaagcagatccatgaggatgaggaatttggcagaacacttgcgatg
ctggatgaggagcctcaagcaaagaaggctcgtcaaggctctgaggaggaaactgccaca
tctcacaaacagaattgctcagattctgctgttgaaaaacggggcagtctggcaaaaaaa
ggccagcggatcaacacaacccagaatgcgagcggcccgtctccaaaaaagagtccagcc
ccagttaaaaccagctctaaactggcaatgatgaagaaaagggatgaatcgccagggagc
aaaatgaccatttcacccagaaaaataaagttttctcccaggaaggagccaatcatttca
tcaatctcagacaagaaggtcgcccacaaagcagaaactgagtcagcctcagttaagttt
tctcccagaaaacaagagagtacaaccacaagtccagaagattcagagaagaagaaggtc
aatgctacagcttataggaattacctcaacagagagggtcccagagctctgggatcaaag
gaaatcccgcagggagcagagaactgcctggagggctgcgtgttcgtgctgaccggcgtc
cttgagtccatggagcgggacgagaccaagtccctcattgagcgctacggaggcaaggtg
acgggcaacatcagtaagaggacaacctacctggttcagggtagagacagtggagtctcc
aaacttgagaaggcggagagtttgggcacaaagatcctggatgaggacggtctgttggag
ctgatcagaaccaaaccaggaaagaaatccaagtacgagatcgctgccgaggctgagatc
aaagcctcaaagaccagaactcccagcaaagcctccaaaagcacccctacagcccagaag
atctctccttcaaaaggtaattccacatctccccacacccccagcccatcaaagactagc
ctggcccaaggccacacagccaggacaagagaggctcgaacgccgtctggaagggggtca
gctcagaccgttcgcagggaactgggcctctcctcctccaacacgtcttcttcacccccg
gatacatcggtcccgcgacagacagggggggaagtggctctgctgtgggttgacaagtac
cgcccgcggtctctgaaggctgtgatcggtcagcagggagagcagagctgtgccaataag
ctgctccgttggttgcagaactggcaccggcaccacgctggaggagctctgaagcccccc
gcagcaaagtttggaaaatttggaggaaaagatgacggatcaggatacaaagctgctctg
ctatctggacctccgggggtgggcaagaccaccacagcttccctggtctgtgaggagttg
ggcttcagctatgtggagatgaatgccagctgtacgcgcagcaagaacaatctgaaggat
gttgttgcagaatcagtcaacaacaccagcattgaaaacttctacaaaggcacatctcag
acggtgagcaacaagcacgtgctcatcatggacgaggtggacggcatggccggcaatgag
gaccgcggaggaatccaggagttaattggcctgatcaaaagttcaaagattcccatcatc
tgcatgtgcaacgatcgcaaccacatgaagatccggtcgttgtcaaactactgttttgac
ctgcgcttccagagaccacgagtggaacagataaaggcagccatgatgtccatcgctttc
aaggagggaatcaacatccggcctccggctcttaatgaaattattctggcctccaatcag
gatgtgcgacaggtgatgcacaacctgagcatgtggtcggccacagacaaggtgatgtca
tacgaccagtgcaagtcggacgctgccaaggctcgcaaagatatgaaaatgggtccattc
gacgtctgcagaaaggtatttgctgctggagaggaaactgcccgcatgagcctcatcgac
aagtccgacctcttcttccacgactactcgctagcgccgctctttgtccaagaaaactac
ctgaacgttcgtccagcagctgctgggggtaacctgaagtcccacctgatgctgctcagc
aaggcagctgactccatctctgatggagatctggtggacaaacggatccgctcggggcag
aactggtcgctgctgcccacccaggccatctatgccagtgtgctgcctggggagctcatg
cgaggatacatgagccagttccccagttttccgagctggctcggcaagaactcctccgct
ggtaaacattcccgcatcgtgcaggagctggcctcccacatgagtttaaagaccatgagc
agcaggtcggcggttaacctggactacctgcactacctgcgccacgcgctgctgagcccg
ctgcagcggcacggagccgagggcgccagcgaagccgtgcagatgctggatgactaccac
ctcatcaaggaagatgtggacagcatcatggagatcagcgtttggggtaatcagcccgac
ctctactccaaactggaccctaaggtgaaggcagcattcacgcgagcttacaataaagaa
gtccatctgacgccatactcgctgcttgcggtgaagaagaaccgtcgtggtggagagtct
gaagttggaggcgtggacatggacaaccaagcgcatgagtctgaggaggatggggagaac
ctccaaactgacgctatgattaaacagaagaaggtcaaagtcggcaagcagacaaaagag
aaagaagattctgggaaacccaaaggcaaggccaaagccaagaccaagaagtag
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integrated database retrieval system
