Takifugu rubripes (torafugu): 101066590
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Entry
101066590 CDS
T02386
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101066590 (ctr9)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101066590 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Casc1_N
Motif
Other DBs
NCBI-GeneID:
101066590
NCBI-ProteinID:
XP_003970060
Ensembl:
ENSTRUG00000017448
LinkDB
All DBs
Position
13:18813243..18819498
Genome browser
AA seq
1160 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYAASDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQDCKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQLLKEQEQKRNKELEEQKKLLEQRAMYVEKTKNLLSFADVPKEMAK
DRKKGSSGGRRKKGGDMDDFVNDDSDEDLPLKKKKKKSGSGSEQEEGEDGDRKARKKKRR
PTKGSGDDSDEEGGASQPKKQRKPKERKRIEKSKPERLPQSLKGKIKSKAIISSSDSSDE
DGLKIAEDGQQRDSGSDSDEDGVHRKRIASDSESDTGRNRSGSEADSPRHSEGSGADDSG
SDRPVKKRRVQRQSDSEQSDAESKKSRSGSDDESRPASPVPASEGGSDRASEAASDNEAS
PRRSDNGSEPERSNEDDDSD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctcaattgagatccctttacgggacacagatgaggttattgagcttgac
tttgaccagctgcctgaaggagatgaagttatcagtatcctaaagcaggaacatacacag
ctgcacatatggattgctttggcgttggagtattacaaacagggcaaaactgaggatttt
gtgaagcttttggaggccgctcgtattgatggaaacctcgactacagagatcatgagaaa
gaccagatgacttgtctggacacattagcagcctactatgttcagcaggcgcgtaaggag
aaaaacaaagatgccaagaaagaactcatcacacaggccacactgctctacactatggcc
gacaagatcatcatgtatgatcagaaccatttattgggaagagcctgtttctgtctgctg
gaaggagacaagatggatcaagctgatgctcagttccactttgtccttaatcagtccacc
aataacatccctgctttgcttggtaaggcctgcatctccttcaataaaaaggattacaga
ggtgctctggcttattataaaaaggctttacggacaaaccctggctgcccagctgaggtc
aggttaggcatgggtcactgctttgtcaagctcaacaaactggagaaagctcgtctggcc
tttggtcgggccctggagttgaattcaaagtgtgtcggggctcttgttggtttggctgtt
ttggagcttaacaacaaggaggcagattccatcaagaacggagtgcagctcctgtcccga
gcctacaccattgaccccagtaaccccatggtgctcaaccacctggctaaccatttcttt
ttcaaaaaggattacagtaaggtgcagcacctggcgcttcacgctttccataacacagag
gttgaagccatgcaggcggagagctgctaccagctggctcgttccttccatgtgcaggag
gactacgaccaagcgttccagtattactaccaggccacacagtttgcctcttctacattt
gtcttaccattctttggtctgggacaaatgtatgtgtatcgaagagacaaagagaatgcg
gcacagtgcttcgaaaaggttttgaaggcctacccaaacaactatgaaacaatgaaaatc
ctgggttctctctacgcagcatctgatgatcaggaaaagagagacattgccaaaggtcat
ttaaagaaggtaacagaacagtacccagatgatgtggaggcctggatcgagctggctcag
atcctggagcagactgacatccaaggagcactgtcggcatatggcaccgccacccgcatc
ctgcaggagaaggtgcaggctgacgttcctcctgagattctcaacaatctcggggctctt
cacttcaggcttggcaacctcggagaggcaaagaaatacttccttgcatcactggagcgc
gccaaagctgaaggggaacacgatgagcattactacaacgccatttcggtcaccacctcc
tacaatttggcccgtctgtacgaggcaatgtgcgaattccacgaagcagagaaactgtac
aaaaacatcctgagagagcatcccaactatgtcgactgttatttgcgtcttggagcaatg
gctcgtgacaaagggaatttctacgaagcttctgactggttcaaagaagcccttcagatt
aatcaggatcaccctgatgcctggtccctcataggcaaccttcatttggctaaacaggag
tgggggcctggtcagaagaaatttgagcgtattttgaaacagccgtccacacagaatgac
acgtactccatgttggctttgggtaacgtgtggctgcagactctgcatcagcccaccaga
gacagagaaaaggaaaagagacatcaagatagagctctggccatatacaaacaagtcctg
cgaaatgaccccaagaacctctatgctgccaatggcattggtgctgttttggcccataag
ggctactaccgggaggctcgggatgtgtttgcacaggtgagagaggccacggctgacatc
agtgacgtctggctcaatctggctcacatctatgtcgaacagaagcagtacatcagtgct
gtgcagatgtatgagaactgcctgaagaaattctacaaatatcagaacacagaagtgctg
ctgtacctcgcccgggcgctcttcaaatgcggcaaactccaagactgcaaacagatgctg
ctgaaggcccgccacgtggctcccagcgacacggtgctgatgtttaacgtggccctggtg
cttcagcgactcgccacactcgtgctgaaagacgagaagagcaacttgaaggcggtactc
agcgccgtcaaagagctggaactggctcacaggtacttcagctacctcagtaaagctgga
gacaagatgaggtttgacctggctctggctgcctctgaggccaggcaatgttctgatctg
ctgagtcaggctcagtaccacgtggctcgggccagaaagcaggatgaagaggagaaggag
ctccgagccaaacaagaacaggagagggatctgctgcgtcagcagttgttaaaggaacag
gaacaaaagcgcaacaaagagctggaggagcagaagaaactcctggaacagagagccatg
tatgttgagaagaccaagaacctgctcagctttgccgacgttccaaaggaaatggcgaaa
gacaggaagaagggaagcagtggaggacgtcgtaagaaaggaggcgatatggacgatttt
gtcaacgacgattctgatgaggacctgccgttgaagaagaaaaagaagaagagtggcagt
ggtagtgagcaagaggagggtgaggatggagacagaaaggcccgcaagaagaagcggaga
cctacgaaaggaagcggagatgacagtgacgaggaggggggagcgtcgcagcccaagaaa
caacgtaaaccaaaagagcgtaaaaggattgaaaagtccaaacccgagcgtctgccgcaa
tctcttaaaggaaaaattaagtccaaggccatcatttcctcctctgattcttcagatgag
gatggactgaagatagctgaggatgggcaacaaagagacagcggctcagattctgatgaa
gacggtgtccacagaaagcgcattgcgtctgacagcgaatccgacacgggcagaaaccgc
tcgggcagcgaggcggacagcccccggcattccgaaggctccggcgccgacgactccggc
agcgaccgtcctgtgaagaagaggcgagtgcaacgccagtccgactcggagcagtcggac
gccgagagcaagaagagccgctcgggatctgatgacgaatcccggcccgcgtcacctgtc
ccggcatccgagggggggtcagaccgagcatcggaagcggcgtcggacaatgaggcctcc
ccacgccgctcggacaacggctcggaacctgagcgctccaatgaggacgatgacagcgac
tag
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integrated database retrieval system
