Takifugu rubripes (torafugu): 101066687
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Entry
101066687 CDS
T02386
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tru03016
]
101066687 (pus1)
Enzymes [BR:
tru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
101066687 (pus1)
Transfer RNA biogenesis [BR:
tru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101066687 (pus1)
Prokaryotic type
101066687 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
101066687
NCBI-ProteinID:
XP_003978868
Ensembl:
ENSTRUG00000002198
UniProt:
H2RY29
LinkDB
All DBs
Position
6:12686207..12692757
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AA seq
422 aa
AA seq
DB search
MLKIRPVFAAFVRQSVTSERTGILSWMVDMMSGGVDQKIQQLKRVQEGDEDCVTKRRKTD
VEPSNEDRRYPKKKVALLMAYSGKGYYGMQRNPGSSEFRTIEDDLVAALVKSGCIPQNHG
DDMKKMSFQRCARTDKGVSAAGQVVSLKLLLIDDLTEKINEHLPPQIRILGVKRVTQGFN
SKNNCDARTYAYMLPTVAFSPKDFDAAGTAPSFRLQPETLQRVNHLFAHYKGTHNFHNFT
SQKAPNDPSARRYITHMLCGEPFIRGDTEFAVITVRGQSFMLHQIRKMIGLVIAVIKGYA
GEEVMERSWGLQKVDVPKAPGLGLVLEKVHYDRYNKRFGGDGLHERLEWEEQEEAVQAFK
EAFIYPTIMETERQEGSMVSWMNTLPIHDFEASAGEAQDGCRLQPRPESTNGDIVNEGHI
SD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaattcgacctgtatttgctgcctttgtcagacagagcgtgacgtcggagagg
acagggatcctgtcttggatggtcgacatgatgtctggaggtgtggatcagaagatccag
cagttgaagagggtccaggagggcgacgaagactgtgtaacaaagaggaggaagacagat
gtggagcccagtaacgaggacagacggtaccccaaaaagaaggttgccctgctcatggcc
tactctgggaagggatactatggcatgcagaggaatcccggatcttctgagttcaggact
attgaggacgacctggttgctgcacttgtcaaatctggctgcatcccccaaaaccatgga
gatgacatgaagaagatgtctttccagaggtgtgcaaggacagacaagggcgtgtctgca
gctggtcaggtggtgtcgctgaagctcctgctgattgatgacctcactgagaaaatcaat
gaacatctgcccccacagatccgaatcttgggtgtgaaacgggtaactcagggcttcaat
tccaaaaacaactgtgatgctcgtacgtatgcgtacatgcttccaactgtggccttttct
ccaaaagactttgatgccgctggaactgcccccagcttccgcctgcagccggagacgctg
cagagggtcaatcacctgtttgctcactacaaagggacccacaactttcacaacttcacc
tcacagaaggccccaaacgacccaagtgcccgtcgctacatcacgcacatgttgtgtggc
gagcctttcattcgtggtgacacggagtttgctgtgatcaccgtgcggggtcagagcttc
atgctacaccagatccgaaagatgatcggcctggtaattgccgtaataaagggttacgct
ggagaagaggtcatggagcgcagctggggactgcagaaggtggacgtgcccaaagctccg
ggcctgggtctcgttctggagaaagtccactatgaccgctacaacaagcggtttggtgga
gacgggttgcatgaacggctggagtgggaggagcaggaggaggctgtccaggccttcaag
gaggccttcatctacccaaccatcatggagacggagcgtcaggagggttccatggtcagc
tggatgaacacacttcccatccatgactttgaagccagtgctggtgaagcccaagacgga
tgccgtctccaaccacggcctgaatccaccaacggagacattgtcaacgaaggccacatt
tctgattag
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