Takifugu rubripes (torafugu): 101067065
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Entry
101067065 CDS
T02386
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101067065 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101067065 (nup98)
03036 Chromosome and associated proteins [BR:
tru03036
]
101067065 (nup98)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101067065 (nup98)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101067065 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
101067065
NCBI-ProteinID:
XP_011615072
Ensembl:
ENSTRUG00000002669
UniProt:
A0A674PRK8
LinkDB
All DBs
Position
15:5919057..5932816
Genome browser
AA seq
1826 aa
AA seq
DB search
MFNNSFGTPFGGGSSGFGSSSTFGQQNTGFGTTGGFATSAFGTTTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAVSGTSNSLFGNSGTGTTGGLFSQPNNAFSANKPTSFG
SFGTSTSSGGLFGSTNTTSNPFGGTTSLFGNSGFSSTQQPGTTIKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMTAGTGSLFGPATATSSAST
GLFGSSASNTGFSFGQNKSTFGASTAAAAAATGGFGATTGGLFNSQTQPPGSSLFKPFGH
TTTTPSTGFSFGNNSIGQANTGNMGLFGNTAAPQPSGLFGAAQTSTATGFGAGTGLFSNT
NTAFGNMGNQNLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGAGTNTSTFGFGANT
AGGSLFGNKPATGGLGTGLGTNFGAVGGTGQTSLFGNNQNKLGATLGTIGTFGGAGFNTG
SSSLGFGTTQQPVALTDPNAAAAQQAVLQQQLSLLTYSPYGDSPLFRNQLSDPKKKEERL
KPTNPTAQKALTTPTHYKLTPRPATRVRPKALSSSGASKSQLFDVLDDDEPSLTNGAFKP
RKSIKKLDLKNLKSSQYSSPPDKERDDLASPVPYPHNGHSHLEEDEELREVPGPSSQVDD
DPEVTQFYVNPIAKPIPHGRTQNHLQDTISELNMQRATKNGLELSSEDVSASLGEDSLLE
DRDEEPQQESKHAPHPAGIVLNRIGYYTIPSMEDLADMVDENGECVVENFSVGRKGYGSI
FFPGEVNMTGLNLDEIVHFRRKEVIVYPDDKNKPPQGEGLNRRAEVTLDGVWPNDKTTCT
QIRSPERLTEMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLLDSDEEEEAP
LKTDPKKLKTMSVPSSGLQQKFPSSQQQVAPQAQSTVVTDLCQLGELDSDMADITQSLPA
DSMLGGEDEGELPLKEMDLSFGKLGGVVSAEHDCISASSHIASSLGINPHTLQIMKASLF
AEDEEDKDLFQDYGAIKLSSDVSSPRLIFPGSQSRPSVGGLLQTRFASGLLSQLPDSPNP
PTAVQWSTKLTVQPPSSFLLPSHAPEPPIKTVGMRRLGGPIPIKESVTQGKGSLLMDAGL
FTGRSFRVGWGPGWTLVHCGDRLSSAPSKMLEHQEMTNFSFPPKTARNRPLRETPYKVVL
EQLGGLDSSSLKTKSVEEEESQALLQHPLEICLKYSTVRTTDSSMCPLVQLQPGVAALHE
YADWITELKEKQSNRDFLLGHWYEVWTLCKALWGRLGPAVQEPDINVPGEYKQQVERRRT
FSSWLSQGATYRVDEEVALAGKGCRTGAIFSYLSGNRISEACELAQKDGDHRLSLMLSQA
MGSQYCRDLLALQLADWNRMQTDCYLPEERLRIFALLAGKPVWHSSDAEVNVCSMLDWKR
CLAVHLWFMLPPTASVADALTRYEAAFKGSDEEGKYACAPLPSYMEAEPMDMEEEEEKEE
CKRPLYDLCFHLLKLYSDRHYSLQQLLDPLTITWERLDYRLSWHLWGVLQALHYSHLSAS
RQGLLHSSYAAQLEGVGLWHLAVFILMHIPDHIQRERAVRDMLTLHCPLQETDESVRRER
FLTEKLLIPEQWIHEAKATRARCDADRHQEALHLYQAKRWNQCHRLLIQHLASDCIINDN
HDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVIKMLHEIQQTENAGYELERLHSEV
TSLCSRIELLPCSTARDRLAQSEMAKRVANILRAVLSLQQSDEGAASIPLTQLAPHITRL
PMPEDYALDELRGLTQSYLRQLIVSS
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaactcctttggtactccttttggtggagggtcaagtggctttggctcctca
tccacttttggacaacaaaacacaggatttgggacaactgggggctttgccacatctgca
tttgggaccaccactaacactggagggctgtttggttcaacacagaataaacctggtgga
ctttttggatccagcacattcagccagccagccacttcctccaccagcactggctttggt
tttggggcagtaagcggcacgtcaaacagcctgtttggcaactctgggactggcaccaca
ggcggtctcttctcacaacctaacaatgctttcagtgcaaacaaacccacttcctttgga
agctttggaaccagcacgagcagtgggggactctttggatcaaccaacaccacctcaaac
ccatttggtggaaccacatcgctttttggaaattctggtttctcttccactcagcagcca
gggacaaccataaaattcaatcctcccactggtagtgacacaatggtaaaagctggtgtg
accacaagcatcaacacaaagcaccagtgcattacagctatgaaagagtatgagaacaaa
tccttggaggagttgagattggaagactaccaggcaggtaggaagggccccaccaacccc
atgacagcagggacgggcagtttgtttggcccagccacggcaacctccagtgccagcaca
ggcctgtttggctcatctgcttccaacaccggcttctcgtttgggcagaacaaaagcacc
tttggggcatcaacagcagcagcagctgccgccactggtggctttggcgccaccacagga
ggcttgtttaacagtcagacacagccgccaggcagtagcctgttcaaaccatttggccat
accacaactacccctagcactggtttctcctttggcaacaactcgataggtcaagccaac
acaggcaacatgggtttatttggaaacacggcagcaccacagccaagtggactctttgga
gctgctcaaactagcactgccactggcttcggagcgggcacaggactattcagcaacacc
aacaccgcatttggaaacatgggcaatcagaatttatttggaaataagacggctggcttt
ggcaccaccactaccagtgcaccatccttcggtactggtaccgggctgtttggcaacaag
ccagccctcactttaggggctggtaccaacacatccacttttggttttggtgcaaacact
gctggagggagtttgttcggcaacaaaccagccactggaggactaggaactggtttggga
accaactttggagcagtagggggaacaggacagacatctctatttggaaacaaccagaac
aaactgggagccacactgggaaccattggaacattcgggggggctggattcaacactgga
agcagtagtcttggttttggaacaacccaacaacctgttgctctaacagacccaaatgca
gcagctgctcagcaggcagtgcttcagcagcagcttagccttctgacttattcaccatat
ggagattcacctctcttcagaaaccagctgtcagaccccaagaagaaagaggagcgcttg
aaaccaacaaatccaacagcccagaaggctcttactacacccactcactacaagttgacg
cctcgacctgcaacgcgtgtccgccccaaagcactttcatcttctggtgcctccaagtca
caactctttgatgtcctggatgacgacgagccctcactcaccaatggagctttcaagcca
aggaaaagcataaaaaaacttgatctgaaaaaccttaaaagtagtcagtacagcagtcct
cccgacaaagaaagagatgatcttgcctctccagtcccatatccacacaatggacacagt
catttggaagaggatgaagagctcagagaggtgccggggccaagttcccaggttgatgat
gacccagaggtcactcagttctatgtgaaccccattgcaaagcccatcccacatggacgc
acacagaatcacctgcaagacaccatcagtgagcttaacatgcaaagagcaacaaagaat
ggactggagctgagcagcgaggatgtgtcagcatctctgggggaggattctctactggag
gacagagatgaggagccgcagcaggagtctaaacatgccccacaccctgcagggattgtt
ctaaaccgtattggatattacaccatcccatccatggaagacctggctgacatggtggat
gaaaatggcgagtgtgtagttgagaatttctctgttggcaggaaaggatatggatccatc
ttctttcctggtgaagtgaacatgacaggactcaatcttgacgagatcgtccacttcagg
cgcaaggaggtcatcgtttacccggatgataaaaataagcctccacagggagaagggctt
aacaggcgagcagaagtgactttggatggagtttggccaaatgataagacaacatgcact
cagatcagaagccctgagcggctgacagagatgaattacgagggtcgtctggagaaagcg
tctcgcaaacaaggagcccgtttcctggaatacaggccagagactgggtcttgggtgttt
gaggtggcccatttctccaaatatggtcttctagattctgatgaggaggaggaagcccca
ctgaaaactgaccccaagaagctcaagacaatgtcagtcccttcctctggtctgcaacag
aagtttccctcttcccagcaacaggtggccccacaggctcagtcgacagtggtcacagat
ctgtgtcaacttggggaactggacagtgatatggctgatatcacccagagcctccccgca
gatagcatgttgggtggagaggatgagggtgagctgccacttaaagagatggacttgtct
tttggaaagcttggaggtgtagtctctgctgagcacgactgcatctctgcatccagccac
attgcgtcctcactgggcatcaatccgcacactctgcagataatgaaggcatctctgttt
gctgaggatgaagaagacaaggacctgttccaggattatggggcaataaagctctccagt
gatgtttcttcccctcgtctcatctttccaggatctcaaagccgaccctctgtgggtggt
ctccttcagactcgtttcgcctctggcctcctctctcagttgccagactctcctaaccct
cctacagccgtccaatggtccacaaagttgacagtgcagcccccttcgtcttttttgctg
ccatcccatgctcctgaacctcctatcaagacagttggtatgcggcgactgggtggaccc
atcccaatcaaagagtcagtcactcaggggaagggaagcttgttgatggatgctggcctg
ttcacaggacggtctttcagggtggggtggggtcctgggtggacacttgtgcattgtggt
gaccggctgagttcagcaccatccaaaatgcttgagcaccaagaaatgactaatttcagc
ttcccaccgaaaactgccaggaacagacctttaagagagaccccctacaaggtggtgcta
gagcagcttgggggtcttgattcatcatcattgaagactaagagtgtggaagaagaggaa
agtcaggcactattgcaacaccctttggagatttgcctgaagtacagcactgttcgtact
acagattcctcaatgtgccctctcgtccagctgcagcccggtgtggcagcactgcatgaa
tatgctgactggatcactgaactgaaggagaagcagagcaacagagactttcttctgggt
cactggtatgaggtctggaccttgtgtaaggcattgtggggtcgtttaggcccagcagtg
caggagccagacatcaatgtgcctggtgagtacaagcagcaggtggaaaggcggcgtacc
ttttcatcctggctgtcccagggagccacctaccgggtggatgaggaggtggctctggca
gggaaaggttgccgtacgggtgccatcttcagctacttgtcaggaaaccgcatcagtgag
gcctgtgaacttgctcagaaggacggagatcaccgtttgtccctgatgctgtctcaggcc
atgggttctcagtactgtcgagacctgcttgctcttcagctcgctgactggaaccgcatg
cagacagactgctatctgcctgaggaacgattgcgcatctttgcactgcttgctgggaaa
ccggtgtggcactcctctgatgcagaggtgaatgtctgttctatgctggattggaagcgt
tgtttggctgtacacctgtggttcatgctacctcccactgcctctgtggctgatgcccta
accagatacgaagctgccttcaagggttcagatgaggaaggcaagtatgcttgtgcacct
ttgccttcctatatggaagcagagccaatggacatggaggaagaggaagagaaggaagag
tgtaaacgacccctgtatgacctctgctttcatctgctcaaactctacagtgacagacac
tacagcctgcagcagctgctggatccactgaccatcacctgggaacgcctggattatcgt
ttgagctggcacctgtggggcgttctgcaagcgttgcattacagccacctgagtgcctca
cgtcagggcctcctccacagcagctatgcagctcagttggagggtgttggcctctggcac
cttgccgtcttcatcctgatgcacatccctgatcacattcagcgggagcgagctgtgagg
gacatgctgaccctccactgccccctgcaggagacagacgagtcagtccgtcgtgagcgc
ttcctgacagagaagctgctgatccctgagcagtggatccatgaggccaaagccacccga
gctcgctgtgatgcagaccggcaccaagaggccctgcatctgtaccaggccaaacgctgg
aaccagtgtcaccgactgctgatccagcacctggcctcagactgcatcatcaatgacaat
catgactacctgctggagttcctggaggggctggcagtccctgagcacagcgctactatt
caggactgggacacagcaggcagggtctacctggactatatccgggtcattaagatgctg
catgagatccagcagacggaaaacgctggttacgagctggaacgtctccactcagaagtg
acgtccctctgcagcaggatagagctgttgccgtgcagcactgcccgagatcgtctcgcc
caatcggaaatggccaagcgcgtggcgaacatcttgcgggcagtactgagcctgcagcag
agtgatgagggagccgccagcatccccctgacccagctggcgccacacatcactcgcctg
cccatgccagaggattacgcgctggatgagctgcgaggcctcacacagtcatacctgcga
cagctcatcgtcagttcatga
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integrated database retrieval system
