Takifugu rubripes (torafugu): 101067180
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Entry
101067180 CDS
T02386
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101067180 (pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tru03036
]
101067180 (pds5a)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101067180 (pds5a)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
101067180 (pds5a)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
101067180 (pds5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
EnP1_C
PI-TkoII_IV
TPR_IPO5
Cnd1
Motif
Other DBs
NCBI-GeneID:
101067180
NCBI-ProteinID:
XP_003972219
LinkDB
All DBs
Position
17:complement(6504836..6521142)
Genome browser
AA seq
1306 aa
AA seq
DB search
MAQFTVSPIHRRPVEDRLDETATSMEFPQQQKAAGEGKITYPPGVKEITDKISNDEVVKR
LKMVVKTYMDMDQDSEEEKQQYLGLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPE
APYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLTWVKSYNICFELEDCNEIF
IQLFKTLFSVINNSHNQKVQMHMMDLMSSIITEGDGVTQELLDTILINLIPAHKNLNKQA
YDLAKTLLKRTVQTIETCIANFFNQVLVMGKSSVSDLSEHVFDLIQELFAIDPMLLTSVM
PQLEFKLKSNDGEERLAVVRLLAKLFGAKDSELASQNRPLWQCFLGRFNDIHVPVRLECV
KFASHCLMNHPDLARDLTEYLKVRSHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVR
DRTLDKRWRVRKEAMMGLAQLYKKYCLHHEAGKESAQKISWIKDKLLHIYYQNSIDDKLL
VEKIFAQYMVPHSLETEEKMKCLYYLYACLDTNAVRALNEMWKCQNMLRGLVKELLDLHK
LPVSEANTTAMLGKLMNIAKNLPDAGKAQDFMKKFNQVLGEDEKLRLQLEMLISPTCSCK
QAETCVREITRKLTFPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTAD
DDEEGVTPDTAIRSGLELLKVLSFTHPTAFHSAETYESLLQCLKMEDEKVAEAAIQIFRN
TGQKIETELQQIRSTLIPILHQKAKRGTPHQAKQAIHCIHAIFNNKEVQLAQIFEPLSRS
LNADVPEQLITPLVSLGHISMLAPDQFASPMKSIVANFIVKDLLMNDRSAGDKNGKLWTT
DEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSD
MSRLRLAAGGAILKLAQEPCYHDIITPEQFQLCGLVINDECYQVRQIFAQKLHLALVKLL
LPLEYLAVFALCAKDPVKERRAHARQCLLKNISVRREYIKQNPLAQEKLVSLLPEYVVPY
MIHLLAHDPDFTKPQEYDQLKDIKECLWFMLEVLMTKNENNSHAFLRKMVENIKLTKDAQ
CADDVKANEKLYIVCDVALFVIANKSTACHLDSPKEPVLPSKFFLLQDKDFKNDKEYLST
EMKQLLLTGKPKPAPVLAAVNKPITVPGKRVFPKTPASSNTVTNTSTNSSPLSSSSIKKN
SNDTTESSAQENNENPIIKNEMKKVEPSQNATPKAEMETPPVKRRGRPPKSAAAASGTAE
KGTPTSGAGRGRKRAADSNSSADSVNSKVSKQKNDEGSKRQIDLQR
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatttaccgtttcacccatccacaggaggccagtagaagaccgtctggacgag
acagcaacgagcatggagttcccacaacagcagaaagcagcgggggaaggaaaaatcact
tatcctcctggagtgaaggagatcactgataaaataagcaatgatgaggtggtgaagcga
ttgaagatggtggtgaaaacctacatggatatggatcaagactctgaagaagagaagcag
cagtatctcggcctggctctccaccttgcctcagagttcttcctcaggaacccaaataaa
gatgtacggctactggtggcctgctgcctggctgacatttttaggatctacgctcccgag
gccccgtacacgtcccacgacaaactcaaggaaatcttcctcttcatcaccaggcagtta
aagggcctggaagacaccaagagtcctcagttcaacagatacttttacctactggagaat
ctgacgtgggtgaagtcttacaacatatgctttgaactggaggactgcaacgagatcttc
atccagcttttcaaaaccctgttttctgttatcaataacagccataaccagaaggtgcag
atgcacatgatggatctgatgagttccatcatcacggagggagatggagttactcaagaa
ttgctggatactattctcatcaacctcattcctgcacacaagaatctgaataagcaagca
tacgatctcgccaaaactctgttgaagaggactgtccaaaccatagaaacatgcattgca
aatttctttaaccaggttttagtgatgggcaagtcatcagtcagtgacctgtcagaacac
gtctttgatctcatccaggagctttttgctattgacccgatgctgcttacttccgtcatg
ccacagctggaatttaaactaaagagtaacgatggcgaggagcgacttgcggtggttcga
ttgctagcaaagttattcggggccaaagactcagagctggcatcacagaacagacccctg
tggcagtgctttttaggacggttcaatgatatccatgttccagtcaggctggagtgtgta
aaatttgcaagccactgcctcatgaaccacccggaccttgccagagacctgacggagtat
ctgaaagttcggtcccatgacccagaggaagccatccgtcatgatgtcatcgtcaccatc
atcaacgctgggaagaaagacctcaacctggttaatgaccagctgctgggctttgtacgg
gatagaaccttggacaaaaggtggcgagtacgtaaggaggccatgatgggtttggctcaa
ctttataagaaatactgtctgcaccacgaggctggaaaagagtcagcccagaagatcagc
tggatcaaagacaaactgctgcacatctactatcagaacagcatcgatgacaagttgtta
gtagagaagatctttgctcagtacatggtccctcacagtctggaaacagaggagaagatg
aagtgtctctactacttgtacgcctgcctggacaccaatgccgtcagagctctgaacgag
atgtggaagtgtcagaacatgttaagaggtctggtgaaagagttgctagacctccacaag
ctgccagtgtctgaggccaataccacagctatgcttgggaagctaatgaatattgccaag
aacctgccagatgctgggaaagcccaggacttcatgaaaaaattcaaccaggttctcggt
gaggatgagaagctcagactccagttagagatgctcatcagtcccacctgctcctgcaaa
caggctgaaacctgtgtgagagagattactcggaagttgacctttcccaaacagcccacc
aaccccttcctggagatggtcaagtttcttctggagcgcatcgcccctgtccacattgac
tctgaggctatcagtgctctggtgaaattactcaacaagtctattgagggcacagctgat
gatgatgaggaaggtgtcacccctgatacagccatccgctctggcctggagctcctcaag
gtcctttcattcacccaccccacagcattccactccgcagaaacctacgagtctctgctt
cagtgtttgaagatggaggacgaaaaagtggctgaggcagccatccaaattttcagaaac
acaggacagaaaattgagacggagctacaacagatacgatcaactttgattcctatcctg
catcagaaagccaagcgtggaactcctcatcaagccaaacaggctattcactgtatccat
gcaatatttaacaacaaggaggtgcagctggcacagatatttgaacctctgtcacgtagt
ctgaatgcggatgtcccggagcagctcatcactccactcgtgtctcttggtcacatctct
atgctggccccagaccagtttgcctccccaatgaagtctattgtggccaacttcattgtg
aaggacttgctgatgaatgacaggtcagctggagacaaaaatgggaagctttggactact
gatgaagaagtttcacctgaagtcttggctaaagtgcaggccatcaagttactggtacgt
tggttattaggaatgaagaacaaccaatccaagtcagcaaattccaccctgcgtcttctg
tcagccatgttggtcagtgagggagacctcaccgagcagaagaagatcagtaagtcagac
atgtccaggctgaggttggcagcaggcggcgccattttaaagctggctcaggagccctgt
taccatgacatcattacacctgaacagtttcagctctgcggcctcgtcatcaacgatgag
tgctatcaagttcgtcagatctttgctcagaagttgcacttggctcttgtcaaactgctg
ttgccccttgagtacctggctgttttcgccctctgtgccaaggacccggtgaaggagcgc
cgtgctcatgcccgacagtgcctcctcaaaaacatttccgtccgcagagagtacatcaaa
caaaacccacttgctcaggaaaaacttgtgtcactccttcctgagtatgttgttccctac
atgattcacctgctggcccatgacccagacttcacaaaaccacaagaatatgatcagctc
aaagacatcaaagagtgcctctggtttatgctggaagtgctgatgaccaagaatgaaaac
aacagtcacgcatttcttcgaaagatggttgagaacatcaaactgaccaaggatgcacag
tgtgccgatgacgtaaaggccaatgagaagctgtacatcgtctgcgatgtcgcactcttt
gttatcgccaacaaaagcactgcgtgtcatctggattctcccaaagaacctgtcctgccc
tccaaattcttcctcttacaagacaaggatttcaaaaatgataaagagtatttgtcaaca
gagatgaaacagttgctgctcactggaaagccaaaaccagctccagtgttggcagctgtg
aacaaacctataacagtaccgggtaaaagggtcttccccaagacacccgcgtcctcgaac
acagtcactaacaccagcacaaactccagcccgctgagctcatccagcatcaagaagaac
agcaatgacaccacagagtcttcagcgcaggagaacaatgaaaatccaatcattaagaat
gagatgaagaaggtggagccaagtcagaacgcgaccccgaaggctgagatggagactcca
cctgtcaaacgtcgcggccgtccacccaaatcagcagctgctgcctctggcacggctgaa
aaaggaacaccaacaagcggcgcgggccgagggaggaaaagagcggctgactctaactca
tcggcagactcggtcaacagcaaagtgtcaaagcaaaagaatgacgaagggtcaaagcga
cagatcgacttgcaaaggtaa
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