Takifugu rubripes (torafugu): 101067299
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Entry
101067299 CDS
T02386
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03030
DNA replication
tru03410
Base excision repair
tru03420
Nucleotide excision repair
tru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101067299 (rfc4)
03410 Base excision repair
101067299 (rfc4)
03420 Nucleotide excision repair
101067299 (rfc4)
03430 Mismatch repair
101067299 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101067299 (rfc4)
03036 Chromosome and associated proteins [BR:
tru03036
]
101067299 (rfc4)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101067299 (rfc4)
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101067299 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
101067299 (rfc4)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101067299 (rfc4)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101067299 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
101067299 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_11
DUF815
AAA_30
AAA_5
Mg_chelatase
AAA_14
RuvB_N
AAA_24
AAA_19
Gp44_lid
SLFN-g3_helicase
AAA_3
Cdc6_lid
ResIII
DNAX_ATPase_lid
DUF2760
Kinesin
AAA_7
Motif
Other DBs
NCBI-GeneID:
101067299
NCBI-ProteinID:
XP_011618259
Ensembl:
ENSTRUG00000005511
UniProt:
H2SLF6
LinkDB
All DBs
Position
20:complement(268583..281917)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATVQAPKAQKEKALAGSSTEKTVKAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPVLYRQRVLELNASDERGIQVIREKVKT
FAQLTVAGTRPDGKLCPPFKIIILDEADSMTPPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLDNHIQETRLLDICEKENLKYSKEGISALVRVSEGDLRKAITFL
QSAARLSIAKEITEHTITEIAGVVPNKMIDNLLHICFRGTFEKLEVAVRNLVDEGYAATQ
ILSQLHESIIEKDFGDKQKSAIAEKMAVVSKCMLDGADEFLQMLSLCSVIMQQSSQD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcattcttgaaaggagcgactgtccaggcgcccaaagcacagaaggaaaaggcc
ttagctgggtccagcacagagaagacggtcaaggctgttccttgggtagagaaatacagg
ccaaagtgtgtggatgaggtggcctttcaggaggaggtggtggctgttctgaaaaaatct
ctggagggtgcagatctccccaacttgctcttctatggccctcctggaacaggaaagacc
tccaccattttagctgctgccagagagctgtatggtccagtgctgtacagacagagagtg
ctggagctcaatgcatctgatgaacgaggaattcaggtcatcagagagaaggtgaaaacg
tttgcccagctcacggtggctgggactcggcctgatgggaaactgtgtcctcccttcaag
atcatcatcctggacgaggctgactctatgacaccacctgctcaggctgctctcaggcgg
actatggagaaagagtcccgcaccactcgcttctgcctcatctgtaactatattagcaga
attattgagcctctgacctccagatgttccaagttccgcttcaaacccctcgacaatcac
atccaagagacgcgtctgctggatatctgtgagaaggaaaacctcaagtacagcaaagaa
ggtatatctgcactggtgagggtgtctgagggagaccttcggaaagccatcacctttctc
cagagcgctgctcgacttagcattgctaaggagatcacagaacacaccatcactgaaatt
gccggggtggttcccaacaagatgattgacaacctgctccacatctgcttcagaggaaca
tttgagaagcttgaggttgcagtgaggaacctggtggatgaaggatatgcagctactcag
atcctgagccagctccatgagtccattatagagaaagactttggtgacaagcagaagtcg
gccatcgcagagaagatggcggttgtgagtaagtgtatgttagatggagctgatgagttc
ctccagatgttgagtctgtgctcagtcatcatgcagcagagctcacaggactga
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