Takifugu rubripes (torafugu): 101067380
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Entry
101067380 CDS
T02386
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101067380 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101067380 (herc4)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101067380 (herc4)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
HECT type E3
101067380 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
QSregVF_b
Motif
Other DBs
NCBI-GeneID:
101067380
NCBI-ProteinID:
XP_011601214
Ensembl:
ENSTRUG00000017737
LinkDB
All DBs
Position
4:complement(3260456..3274918)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC
NDLGQLGHEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNN
FEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST
PQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLR
SQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQIS
CGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIESESEQCF
CIHRIYAGGDQSFAHYYSPNKPQTITDVQTNRGICTLNEDIIEKWLSHSTGRLSLEISSE
IDLVFSSASCLNGSFLATSNPDHFNTSSKFSGVDMNMARLLFHRVIQHDHPEISQLIAAS
LEKNLLPRLTNSPPDIESLRLYLTLPECPLFSDQNNYVTITIPFAKSIIMLKEAALKVLG
NWWSTFEGMLFQRLVELYKEVVVYLLRMHKLGIPSIEQRIFNCFLDTSLRFLKMLHAVSE
RAGHIIEYDKFYIHELDDLVDIRNDYITWFQRQMFPSGPDSLVTLCRYPFVFDAQAKTTL
LQTDAVLQMQMAVDQAQMQNLSSLFMPVESVNPCLILIVRRDNIVGDTMEVLRKSKNVDY
KKPLKVIFVAEEAVDAGGVRKEFFLLIMKELMDPKYGMFRYYEESRLIWFSNKTFEEFDL
FNLIGIICGLAIYNLTIVELQFPVALYKKLLKKKPTLDDLKELTPDVGRSLQALLDYPED
DLEETFCLNFTITEENYGATEVFELIPNGENISVNKSNRQEFVNAYVDYVFNTSVAPLFE
YFYAGFHKVCGGKVLELFQPNELQAMVIGNTSYDWAELEKSTEYKGEYWKDHPTIKLFWE
VFHSLPLQKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFNLLDLPKY
TSTETLREKLLHAIDHNQGFNLA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggaaatgcctcctacggacagttaggtttgggtgggattgatgaggag
attgtgattgaaccaagaaaatgtgaattctttcacgggaagaaagtctgtgacgtgggc
tgtggccttaagcacacagtcttcctgctggatgatgggacggtgtacacctgtggctgt
aatgatttagggcaactgggtcacgaaaagcccagaaaaaaaccagaacatgtcgtagct
ttggatgcacagatcattgtggcggtgtcaggtggagagtcacacacactggccctgaat
gacaaaggacagattttctcctggggtcttggctcagatggacagttgggcctcaacaac
tttgaggaatgcgtgcgtgtacctagaaacatcaagtgcttgtcagatgtgcaaattgct
caggtagcctgtggatatcgtcattcgcacgcactatcaaaagggggtcaagtcttctcc
tggggccaaaatcaatttggacaacttgggctgggaatgcatggatccagtatctccact
cctcagatcatacagtccttacagggcattccttttgcccagctatctgcaggtggtgct
cacagttttgccatcaccctctcaggcgcagtgtttggttgggggcggaacaagtttggt
cagcttggccttaacgacaccaatgaccgttggttcccagctcttctgaagtcgctgaga
tctcagagagtaatttatgtctcctgtggagaagatcacacagcagcactgacaaaggaa
ggaggtgtgtttacgtttggagctgggggatatggacaactcggccataattccacaaac
catgaaatcaatccgaggaaagtgtttgagctcatgggaaatatagttacgcagatctca
tgtggaaggcagcacacgctggcttttacaccctcctctggaaagatgtactcatttggg
ctgggtggtaatggccagcttggtacccgctccacttgcaacagaaaaagccctgccccc
gttaaaggaccctttgtggcctccgctgctccaatagaatcagaatcggagcagtgtttc
tgtattcatagaatttatgcaggaggagaccagagcttcgctcactattactctcctaat
aagccacagaccatcactgatgttcagaccaaccgaggtatttgcaccttaaatgaggat
atcatagagaagtggttgagtcactccactggaagactttcactagaaatctccagtgag
attgatcttgtgttctcctcagcaagttgtctcaatggatcttttctagcaacaagcaat
ccagatcacttcaataccagcagcaaattttcaggggtggatatgaacatggctcgactg
ttgtttcacagagtgatccaacatgatcaccccgagatcagtcagctgattgctgccagc
ttggagaagaacctactgcctagactaaccaactcacctccagacatcgaatccctgaga
ctttatctaaccctgccagagtgcccactcttcagtgaccaaaataattacgtgaccatc
accattccttttgccaaatccattattatgttaaaagaggctgcattaaaagtgctagga
aattggtggtctacatttgagggcatgctctttcagaggctggtggagttgtacaaggaa
gttgtggtctacctgcttcggatgcacaaacttggaattccatctattgagcagagaatt
ttcaactgcttcctggacacatcgctccgatttctgaaaatgttgcatgctgtgagtgag
agagcaggacacatcattgaatatgataagttttacatccacgagttggatgacctggta
gacatcaggaatgactacatcacatggtttcagaggcagatgttcccatcgggtcccgac
agcttggtgactctgtgcaggtatccctttgtatttgatgcccaagcaaaaaccacacta
cttcagactgatgctgtcttacagatgcagatggcagtggaccaagcacagatgcagaac
ttaagctctttgttcatgccagtggaatcggtcaacccgtgcctcattctcatcgtacgc
agggataatattgtgggagacaccatggaagtgctcaggaagtccaagaatgtcgactac
aagaaaccactcaaggtaatttttgtggctgaggaggcagttgatgccggaggggtgaga
aaggagttcttcctcctgatcatgaaagagctaatggatccaaaatatggaatgtttcga
tactacgaggagtccaggctcatctggttttctaacaagacctttgaggagtttgacttg
ttcaatctcattgggatcatctgtggcttggccatctacaatctcactatagtggagctc
cagttccccgttgccctttacaagaagctcctgaagaagaaaccaacacttgatgacttg
aaagagctcacgccagatgtcggaaggagtctacaggcactactggattacccagaagat
gaccttgaggaaacattctgcttaaactttacaatcacagaggaaaattatggtgccaca
gaagtttttgaactaatacctaatggtgaaaacatcagtgtcaataaatcaaacaggcaa
gagtttgtcaacgcatatgttgactatgttttcaacacatcggtggcgccgttgtttgag
tacttctatgcaggctttcacaaggtgtgtggtggaaaagttctcgaactgttccagccg
aatgagctgcaagccatggtcattggcaacaccagctatgactgggcggagcttgagaag
agtactgaatacaaaggagaatactggaaggaccatcccaccatcaagcttttctgggag
gtattccacagtctccccttacagaagaaaaaacagtttctcttgttcctcacaggaagt
gaccgcatacctatcttgggcatgaaaagcttgaagctggtgattcagcccactggtgga
ggggagcattacttacctgttgctcacacctgcttcaacctgctggatctacccaaatac
accagtactgagactctgcgggagaagctgctacatgctatagatcacaatcaaggattt
aatcttgcctga
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