Takifugu rubripes (torafugu): 101067597
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Entry
101067597 CDS
T02386
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03420
Nucleotide excision repair
tru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101067597 (ercc4)
03460 Fanconi anemia pathway
101067597 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101067597 (ercc4)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101067597 (ercc4)
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101067597 (ercc4)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
101067597 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
101067597
NCBI-ProteinID:
XP_003961400
Ensembl:
ENSTRUG00000016960
UniProt:
A0A3B5JXV2
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Position
1:10257686..10263080
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AA seq
896 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGSDGLVVVAEGMGIDRILLQFMRVYSEQGSLVLLLNTTTPEQE
YFTEQLRMEGVTHLPRTVTSDIQNTERYNVYTEGGVLFVTSRILVVDFLTDRIPAQLITG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSAILEIMSACLKELKRFNPTLEAE
DFSLESTLGNSFDKTIRHYLDPLWHQLGAKTKALVHDLKVLRVLSLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSNSMFVNARARVYHIPDSKKKMKVGAETEKQKSSSVAEV
KRELVLERSPKWEALTEVLQEIERENRSSQHEQGHVLICASDDRTCAQLQQYIKHGSDWL
LNRLYARTVGKRDSATSAGFELDLDQKNKDRTNKGQKRKESEQKKRTKSIKSKKRPSLTL
TQMMGKEEPAGGAVMGSSGDEDEEDGEEEEEPELELSSDAYYGVLKEPLTVIHPLKGLTD
PHSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKACRPGKPLRVYFLIYGGSTEEQKYLTA
LSKEKKAFEHLIREKATMVIPEEREGREDTNLDLARNMESANATTNSRKAGGQEQPKEPS
RVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILSPDTCVERKSVSDLIGSLQSGRLY
TQCLSMTRYYRKPVLLIEFDPTKPFSLMARTDFHHEISSNDISSKLTLLTLHFPRLRILW
CPSPHATADLFLDLKKGRPEPDATAAQAVTAESDTVAESADIYNPGPYDFLLKMPGVNTK
NYRSLIKNADSLADLAKLSQKELVKILGNINNAKLLYEFLHNAADVPAPMQRAKQT
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccattgctggagtttgaaaccgagatgtttctcagtctgtttggtagtgat
ggacttgtggtagtggcggaggggatggggattgaccgcatccttctgcagttcatgcgg
gtttactcagagcagggaagcctggtccttctgctcaacacgaccacacctgaacaggag
tattttactgagcagctgcgtatggagggtgtgacccacctgcccaggacagtaaccagt
gacatccagaacactgagcgctataatgtttacactgaaggaggagtgctttttgtcacc
agcagaattcttgtggtcgacttcctgacggaccgcatccctgctcagctcataacagga
atcctggtgtatcgtgctcataaaatcattgagtcgtgtcaggaggcattcatccttcgt
ctgtttagacagaagaacaagacgggcttcattaaagctttcacggacaaagccaccgca
ttctcttctggattctgccaggtggaacgtgtgatgaggaacctctttgtcaagaaactt
tatttgtggcctaggtttcaagcttcagttaacacagctctggaccggcacaagccggag
gttgtggagctccatgtgtcactaacaccagctatgagggccatccaaagtgccatcctg
gagatcatgagtgcctgtctgaaagaactcaaacgcttcaaccctacactggaagctgaa
gacttctctttggagagcacattaggaaactcttttgacaagactatccgtcactatctg
gaccccttgtggcaccagctaggagcaaaaacgaaggccctagtccatgatctgaaggtg
ttgagggtgctctcgctttaccttacccagtatgactgtgtaaccttcctcaatctgctc
gagtcgctccgttccagccaaaagaactttggatctaattcagggtggttgttcctcgac
tccagcaactccatgtttgtaaatgctagagcacgagtctatcacatccctgacagtaag
aagaaaatgaaagtaggagcggagacagagaaacagaagtcatcttctgtcgctgaggtg
aagcgagaacttgtgttggagaggagccctaagtgggaggctctcactgaagtactacag
gagattgagagagagaacaggagctctcagcatgaacaaggtcacgtgctgatctgtgcc
agcgatgacaggacttgtgcccagcttcagcagtacatcaaacacggttctgactggctg
ctaaaccgactctacgctcgcaccgtcggtaaacgggactctgccacttctgctgggttt
gagctggatttggaccaaaagaacaaagacaggactaacaaaggacagaagaggaaggaa
tctgaacagaagaaaagaacaaaatcaataaagagcaagaaaaggccatcactgaccctg
acccagatgatggggaaagaggagccagctggaggggcagtaatggggagcagtggggat
gaagatgaagaggatggagaagaggaagaagagccggagctagaattgtcatcagacgct
tattacggggttctaaaggaaccgctgactgtcatccacccactgaaaggcctcacggac
ccccacagcctgacacgtgtgctgcacgaggtggagcccagttttgtggtgttatacgat
gccgagctcagttttgttcgccagctggaaatctacaaagcgtgccggcctggaaaacca
ctgcgggtttatttccttatctatggaggctcaactgaagagcaaaagtacctgacggct
ctttctaaggagaagaaagcctttgagcacctaatcagggaaaaggctacaatggtcata
ccagaggagagagaggggcgagaagataccaatttggacctcgcaagaaatatggaatct
gcaaatgctacgaccaactcacgcaaagcaggaggtcaggagcagcccaaagagccgtca
cgagtgattgtggacatgcgtgagttccgcagtgagttgccctcgttgctgcaccgccgt
ggactggacatcgagcccgtcaccctagaagtgggagactacatcttgagcccagacacg
tgtgttgagcgcaagagtgtcagcgatctgataggctcactgcagagcggccgcctctac
actcagtgtctgtcaatgacccgctactacaggaaaccggtgcttctcattgagtttgac
ccaacaaaacccttttccctaatggcccgtacggattttcaccatgaaatatcatccaat
gatatttcttcgaaactgactttgctcaccttgcatttcccccggctccggatactctgg
tgtccctctccgcatgccacagctgacctgttcctagatctcaaaaaaggtcgtcccgaa
cctgacgccacggcagcgcaggcagtcacagcagagtccgacacggtggctgaatctgca
gacatctacaaccccggaccttatgacttcttgttaaaaatgcctggtgtcaacacaaaa
aactacaggagtcttataaagaatgcagacagcctggcagatttagctaaactcagccag
aaagagctggtaaaaatacttggaaatattaacaatgctaaactgctctatgagttcctc
cataatgctgctgatgttcccgctccaatgcagagagccaaacaaacgtga
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