Takifugu rubripes (torafugu): 101067665
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Entry
101067665 CDS
T02386
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101067665 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101067665 (gspt1)
03012 Translation factors [BR:
tru03012
]
101067665 (gspt1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101067665 (gspt1)
Translation factors [BR:
tru03012
]
Eukaryotic type
Release factors
101067665 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
101067665
NCBI-ProteinID:
XP_011603101
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All DBs
Position
1:10053364..10058703
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AA seq
581 aa
AA seq
DB search
MDPDTAPDSWELEEDTEAPSAAAELPTAFAALNVNAKPFVPNPNAPVFVPTFLQASSAEM
PASGGPQDPVTYMEVTETVALPVENGSSEADMAAEEETWELKEEPGGGGGSSDQENMASG
VGGREKADEEMMEEEEEEMPVPKVVSVPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLT
GMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILD
APGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVL
INKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIYFMPCSGLTGANLKDPVAECPW
YTGLPFISHLDSLPNFTRTSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLTMMPNR
HTVEVLTLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILCSPDNICHSGRTFDAQIV
IIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKLRPRFVKQEQVCIARLR
AAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacccagacacagccccggattcgtgggaactggaggaggataccgaggccccgagt
gctgcggcggagctcccgaccgccttcgcagctctcaacgtgaacgccaagccgtttgtt
cccaaccccaacgccccggtcttcgtgcccaccttccttcaagccagttccgcggaaatg
ccggcgtcaggcggtccccaggatcccgttacctacatggaggtgacagaaacagtcgca
ctgccggtggagaatggaagctcagaggcagacatggctgccgaagaggagacgtgggaa
ctgaaggaagagccggggggaggtggaggaagcagcgatcaggaaaatatggcttcagga
gtgggtggccgagagaaggcggacgaggagatgatggaagaagaggaggaggagatgcca
gtgcctaaggtggtttcagtgccgccagatgcacctaagaaagaacacgtcaatgtggtc
ttcattggccacgtggatgctggtaaatccactattggggggcagatcatgtacttaacg
ggaatggtggaaaagcgaacgctggagaaatatgaaagagaagcaaaggaaaagaacagg
gagacatggtacctgtcgtgggctctggacaccaaccaggaggagagggacaaagggaag
acagtggaggtcggcagagcttactttgagacggagaagaaacatttcaccatcctggac
gcccccgggcacaagagctttgtcccgaacatgatcgggggggcgtcgcaagccgacctg
gcagtcctggtcatttcagccaggaagggggagtttgagacgggctttgagaagggcggc
cagacaagggagcacgccatgctggcaaagaccgccggagtcaaacatctcatcgttctc
atcaacaagatggacgaccccactgtcaactggagcctggaaaggtatgaggagtgtaag
gagaagctggtgccttttctcaaaaaggtgggcttcaaccccaagaaggacatctacttc
atgccttgctctgggctcacaggcgccaacctcaaggacccagtagccgaatgcccttgg
tacacgggtttgccatttatttcccatttggacagtttgccaaacttcaccagaactagt
gatggaccggtcagattacccatcgttgacaagtacaaggacatgggcacagtgatcctc
gggaagctggagtccggatccatcagcaaagcccagcagctgaccatgatgccaaaccgg
cacacggtggaggttctgaccctgctgagtgacgatgtggagacggacgacgcaacgcct
ggggagaatctgaagttaaggctgaagggaatcgaagaggaagaaatccttccaggtttt
atcctctgcagccccgacaacatctgccactcaggtcgcacctttgatgcacagatcgtc
atcattgagcacaaatcaatcatttgtcccggctacaacgccgtcctccacatccacacc
tgcatagaagaagtgcagatcacagccttaatctgtctggtggacaagaagacgggcgag
aaaagcaaacttcgcccccgttttgtgaagcaggagcaggtgtgcatcgccaggctccgt
gcagctggagtcatctgcctagagacctttaaagactttcctcagatggggcgattcacg
ctgagagacgaagggaaaaccatcgccatcggcaaggtgctgaagctggtacccgaaaag
gactag
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