Takifugu rubripes (torafugu): 101067797
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Entry
101067797 CDS
T02386
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101067797 (prpf39)
Spliceosome [BR:
tru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101067797 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
ARM_TT21_2nd
HrpB1_HrpK
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
101067797
NCBI-ProteinID:
XP_011610244
Ensembl:
ENSTRUG00000011730
UniProt:
H2TY70
LinkDB
All DBs
Position
16:6397885..6403800
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AA seq
759 aa
AA seq
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MSDTESPILSDRPFSGMLHTEPPVMESNGDAFLPDLPVPGQTADCPMDQSAMGPLTSTLP
ENTGTSQDVQMNAGDPGSLGPVQPPQLYQEEQPPLPPQPLEEAQAPEQPEMDAVPVEANP
DETDVSHVTGDGMELEEPSRENEEIAVPPEPELPAEFEKLFKGCEDNPEDFNGWVYLLQY
VEQENVLPAVRKAFDVFFLRYPYCYGYWKKYADIEKKHDNIQAAEEVYRRGLQAIPLSVD
LWLHYLTFFKENSDTTDPETDSRIRAAYEHAVLAAGTDFRSDRLWESFIAWETEQQKLAN
VTAIYDRILGIPTQLYSQHFQKFKDHVQSNHPKHFLSEEEFVKLRVELSKSSLAGMISED
DAAVAQEELPPGIEDLADPAKRVTEIENMRHKVIEIRQELFNHNEHEVSKRWAFEEAIKR
PYFHVKALEKTQLTNWREYLEFEIENGTPERVVVLFERCLIACALYEEFWIKYAKYLEGY
STDGMRHIYKKACITHLPKKPAIHLLWAAFEEQQGDAEEARRILKSLEATVPGLAMVRLR
RVSLERRHGNLTEAEALLRESMESASTIAERSFYAVKLARQHMKVQRNLSKAKAVLLDAL
ESDHTNPKLYLNLLELEYSGDVTQNEAEILVCFDRAVNSGMPIESRLLFCQRKVEFLEDF
GSDINMLVAAYEEQQKLQKEDEASKTKAENGYDSSQEPDAKRQRVDDGSGAATALTDAQA
QNSAYNYNWYQQYGGWGQNTWGQYAQYNQYNQYYPPPPT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgaaagcccgattctctcagacagaccattctctggaatgctgcacact
gagcctcctgtcatggagagcaatggggatgcctttcttcctgatcttcctgtacctggt
cagactgctgactgccccatggaccagagtgccatgggaccacttaccagtaccctgcca
gagaacactggtacatcccaggatgtgcagatgaatgctggagatccaggatctctgggg
ccggttcaaccaccacagttgtaccaagaggagcagccacccctcccaccacagccctta
gaagaggcgcaggctccagaacaacctgagatggatgcagtgccagtggaagccaatcca
gatgagactgacgtgtctcatgtgactggggatgggatggagctggaagaaccgtccaga
gagaatgaagaaatagccgttcctcccgaaccagagctgcctgccgagtttgaaaaactt
tttaaaggatgcgaggacaacccagaagatttcaacggttgggtttacttgctgcagtat
gtggagcaagagaatgtacttccagctgtgaggaaagcatttgatgtattcttcctacgt
tatccctactgctacggctattggaagaagtatgctgacattgagaaaaaacatgacaat
attcaggctgcagaagaggtttacagaagaggcttgcaggccattcctctgagcgtagat
ttgtggctgcactatttaacctttttcaaagagaactcggacaccactgaccctgagact
gactcgcgtatccgagctgcatatgaacatgcagtacttgcagcagggaccgattttcgt
tccgaccgtctttgggaatccttcatcgcctgggagacggagcagcagaaattggctaac
gtcactgcgatctatgatcgcatccttggcataccaacccagctctattcccagcacttc
cagaagtttaaagatcacgtgcagagcaaccacccaaagcactttttgtccgaagaggaa
ttcgtcaagctgagagttgaactttctaaatccagcctagcaggaatgatcagtgaggac
gatgcagcagttgctcaggaggagcttccacctggcatagaggatctcgccgaccctgca
aagagggtgactgagattgaaaacatgcgtcataaggtgattgagattcgtcaggaattg
ttcaaccacaacgaacatgaagtcagcaagcgctgggcctttgaagaagcgatcaagaga
ccttacttccacgtcaaagccttggaaaagactcagctgaccaactggagggagtacttg
gagtttgaaatagaaaacgggaccccggagcgtgtagtggttctttttgagagatgcctc
atcgcctgtgcgctctacgaagagttctggatcaagtatgctaaatatctagagggatac
agcacagacggcatgagacacatctacaagaaggcgtgcatcacccatctgcccaagaaa
ccagctattcacctgctgtgggcggcctttgaagagcagcagggtgatgccgaggaagcc
cgtcgaatcctcaagtccttggaagccacggttccgggtctggcgatggtgcgtctccgg
agggtcagccttgaacgtcggcatggcaacctgactgaagctgaggccctgctaagagaa
tccatggagtccgcgagcaccattgcagagaggtcgttctatgctgttaagctggccagg
cagcacatgaaggtgcagagaaacctgagcaaggccaaggcggtgttgcttgatgctctc
gagagtgatcatacaaatccaaaactttacctgaatctgctggaacttgaatacagtgga
gatgtgacgcagaatgaggcagagatcttggtctgtttcgaccgggctgtgaacagcggc
atgcccattgagtctcgccttctcttctgccagcgtaaggttgagttcctggaggacttc
ggcagtgacatcaacatgcttgtggctgcatatgaggaacagcagaaactgcagaaagaa
gatgaagcttcaaagacaaaagctgagaatggttatgacagctctcaagaacctgatgcc
aaaagacagcgtgtggatgacggttcaggtgctgctactgcactgacggacgcacaggcc
cagaactcagcctacaactacaactggtaccagcagtatggtgggtggggacaaaacacc
tgggggcagtatgcccaatataaccagtataaccagtattatcctcctcccccaacatga
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