Takifugu rubripes (torafugu): 101067921
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Entry
101067921 CDS
T02386
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101067921 (focad)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101067921 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
101067921
NCBI-ProteinID:
XP_011604804
Ensembl:
ENSTRUG00000000968
LinkDB
All DBs
Position
8:complement(10734661..10756361)
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AA seq
1800 aa
AA seq
DB search
MTESLRLRFDFASPVIQLQTVKYLIAAVLKEKGPSGQITSSTLQGPALQSLWEQCCSDSA
VIHSTCCDAVVLLVAQGHADLQFVLNNVLNLLPSARNVQGLMKIIGQLLQIETDQRDRSV
NFTCPYSIRKNPHPFITALESRVDCWPALTLEIDDFIQQAVDRRDPAYMDVLAPFLQYLY
CEPQRQTQHALLRHSLLKVLLPSPPRTGSALKDKDHEQNCSVSDGLLSRLCQMVPYMQVD
NMEAVLELCEFVAALLQTLLAFEERWRKERAELLLQMLCVSHRCLVINGDCRPLLSLMQQ
LLPHCRHDLPLDELMVGVALLLLEAPSGQQSRLLSLALSLVPEDAELSPWLSPILVLPLL
QLLSCSSLTEPLAEKRTHQLNLDLAHRLLRQISKGTDKRQSCPPPMRLLSSWYSELRVAL
STLRKVADNPGAAAEWLLSVSSALSSSQPRLCSLSLIVTHLILTGEEQICRLALKVVQAI
ATADPSQVPSLIPVLLYKLGRANDPSVVHAVLYCLPGLGTHKLCISMVLQTLSMLASAPK
MSAVAMRLLTALWKIQDRIYPELQVLLGQDRKVVVGRDAQWEQTLARAVCIRDICRERPY
QHGGDMLAAITSMLNQCTSADMAVPAAVALHGLKELCSAEVVDILSTWKSLGLQLRTDSR
TPLVKATAEILALVPQLTVKTEEYEKLKEEVVSVLWTDALSKDPEVAACGYKALAAFPQE
LHTINHLPEAVRPLPNLSEHGEDEQEMEEPDLSIAGPTYMRLMEHTPPPVLPAFELFLTA
LVKEEMSQMPRGVHFMAMRGGSLASTRGKTVAGIPAFMLKTYEKNKQPGLKSGLTAGLLL
CYELPLQTDREGRPINRLLVNRSHAYQQILANLIHDVNIQPSEWHRALLLPQAWSGFMSR
AFNAALQGRRADLELRHKQGKDDSEELHYKQHCAWLWARDQLADIIKSAIKDSPVVQGNS
ILALSGLAAAVAKYGSNLPANGEDSHGAAAEFVPTADWLAMVLNTLLSISSSNYKATGPV
FQWFLHRSYSGENTASVIARSCASLALSLLVPFLAAWRKDSLLEILPALQAGLPGSPTAE
DSQAIQFHSGLALGMVVSGAHHQHLSGVSAHQDAALLLDSLDALEKCSFKADLEYRTGCL
LGLALVLVALCDMEQTDLHVRVTQTLDKLVSNLQDGGQGRMIQEVLAYSVACVTVSAFSK
GLLDASKAAEVMNTLRNLTEESQQTTGFSLALGMVVHGLSMCGHGKAEDIHPHLLASWMK
ILLAEGCPTMHRLAAVSGLVALVGSESCIIHLKSELEISSQQQSRLNEVIRAVTQVVTLS
GAIGLQSNSACLLGHLYLAHMSNSCSHSSVPQDFSYLPEKSVIRSVATFLTEAGKKGPDF
VHPVLVKTAVTSLASVGAGFQFPPVNWSVSLSPLMRLGFGEDVQHQCLVLAASQAHSSQS
AALFLGSWVSPPLVHSLSHPTRVHLYESLGLWMKHVAEDKLQVYVDKLGLQHFQDKQNPH
SLSMCQSLLRGLAQAMALPNPPKHCWTVLSSTTEKIYSILPNQIQDNEVGLYVGLAKCLS
ELCDTEIDRITRVTEDRMEKAAFILAYLTSKGRLPFLGLNDVISGIRCGWPGHRVGWILL
QAFYQCHRGTNPSTGVSQQMEWLLELMGHIRNIAYGGKAEPSGDTSAATDFLFHVFAAAV
VSWGDHVVPLLLGVRATWLPWQPESKPQILEHSLYGEESHVGNALPHCLLGMPLSLAQLL
SKEPWSSQRHKFIDWLLSITEGPEKSFSVAVTNAAKAALLALNSVPEFKKKLVWTRAYGW
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagtctgaggctaagatttgattttgccagccctgtcatacaactacagacg
gtgaaatatcttatagctgctgtgttaaaagagaagggacctagtggacaaatcacaagc
tctacactgcagggcccagcactgcagtccctgtgggaacagtgttgcagcgactctgct
gtgatccattctacttgctgtgatgccgtggtgctgttggtggctcagggccatgcagac
ctgcagttcgtcctcaacaacgtcctcaacctcctcccctcggccagaaatgtgcagggg
ctgatgaagattattggacagctgttacagattgagacggaccaaagagacagaagcgta
aacttcacctgtccctactccatcaggaaaaatcctcatccattcatcacagccctggag
agccgagtggactgctggcccgctttgacgctggagatcgatgatttcattcaacaggct
gttgacagacgtgacccggcctacatggacgtgctggccccgttcctccagtatctgtac
tgtgagccccagaggcagacccagcacgccctgctgcgacacagcctcctcaaggtgctg
ttgccatcgcctccacgtaccggatcggccctcaaggacaaagaccacgagcagaactgc
tcagtgtccgacggtcttctgagccgcctctgtcagatggttccttacatgcaggtggac
aacatggaggcggtgttggagctgtgtgagttcgtagctgctctgcttcagactcttctg
gcctttgaggagcgctggaggaaggagagggccgagctgctgctgcaaatgctgtgcgtc
tcccatcgctgcctggtcataaacggagattgtcgacctctcctcagcttaatgcagcag
ctcctgcctcactgccgccatgatttgccattggacgagttgatggtgggtgtggcctta
ctcctcctcgaggctccgtcgggtcagcagagccggctgctcagtctggcattgagttta
gtgcccgaagacgccgaactctcgccgtggctcagccccatcctggttcttcctctgctg
cagctcctgtcctgctccagtctcacagagccgctggcagaaaaaaggacgcatcagctc
aacctggatctggcccacagactgctgcgccaaatcagtaaagggacggacaagcgacag
tcctgcccacccccgatgcgtctcctaagttcctggtacagtgagctccgcgtggctctt
tccactctgcgtaaagtggcagataatccaggagcggcagccgaatggctgctgtctgtc
tcttcggctctgtccagcagccagccccgactctgctcgctcagcctcatcgtgactcat
ctcattctgacgggcgaagagcaaatctgccgactcgctctaaaagttgtccaggctata
gcgactgctgaccccagccaggtcccttccctgattcctgttctgttgtacaaactgggg
agggccaatgatcccagtgtcgtccatgctgtgttgtactgcctgcctggccttgggacc
cacaagctctgcatctccatggtgctacagacgctctctatgctggccagtgcacccaag
atgtcagcggttgcgatgcgcctgctgactgctctctggaagatacaggatcgaatttac
cccgagctgcaggtcctgctgggacaggacagaaaggtggtagtggggagggacgcccag
tgggagcagacattggccagagctgtctgcatcagggacatctgcagagagagaccttat
caacatggaggtgacatgttagctgccatcacgtcaatgctgaaccagtgcaccagcgca
gacatggcagtgccagctgccgttgcactacacggattaaaggagctgtgcagcgcagag
gtagtggacattttgtcaacgtggaagagtctcgggctgcagctgcgcacagactcccgc
acacccctggtcaaagctaccgctgaaattctggcactggttcctcagctgactgtcaag
acggaggaatatgagaaattgaaagaggaggtggtcagcgttctctggactgacgctttg
agcaaggatccagaagttgctgcctgtggttacaaagctttagcagcatttccacaagag
ctccacaccataaatcaccttcctgaggccgtccgcccattgccaaatctttctgaacac
ggggaggacgaacaagagatggaagaacctgatctgtccattgcagggccaacttacatg
aggctgatggagcacacgccaccacctgttctaccagccttcgagcttttcctgacggcg
ctagtgaaggaggaaatgagccaaatgccccggggggttcacttcatggccatgaggggt
gggagccttgcttccacccggggtaaaacagtggccgggatcccagcattcatgttgaaa
acatacgagaaaaataagcagccgggactgaagtccggactcacagctgggctgctgctt
tgttacgagctgcctttgcagacggaccgtgaaggcagacccatcaaccgcctccttgtg
aatcgcagccacgcctaccagcagatcttggcgaatctaattcacgatgtgaacattcag
ccgtcagagtggcaccgggctctccttctgccccaggcctggagcggtttcatgagccga
gctttcaacgctgccctacagggccggcgtgctgatttggagttgcggcacaaacaaggc
aaagacgactcggaggagctacattacaaacagcactgtgcatggctgtgggcccgagat
cagctggctgatatcatcaaatctgcaataaaggacagtcctgtcgtgcaaggaaattcc
atcctggctttgagcgggctagcagctgccgtcgccaaatatgggagcaacttgcctgct
aacggtgaagacagccatggggcggcagcagagtttgttcccacggccgactggctggct
atggtcctcaacaccctgctcagtatcagcagcagcaactacaaagctacaggaccggtg
ttccagtggttcttacatcgctcctactcaggggagaacaccgccagcgtcatcgctcgc
tcctgcgccagtcttgcgctctcccttctggtgccttttttggcggcttggcgaaaggac
agcttgctagagatcctgccggcgctgcaagctggcctgccgggctcccccacagctgaa
gactcccaggccatccagttccattcaggcctggctctcggcatggtggtgagcggagcg
catcaccaacatctcagtggtgtttcagctcaccaggatgctgctctgctcctcgactct
ctggatgctctggagaaatgctccttcaaagcagatctagaatacagaaccggatgtttg
ttgggcctggctctggtgctcgttgccctttgtgacatggaacaaacggatctacacgtc
cgcgttacccaaacactggataagcttgtgtccaacctgcaagatggtggacaaggacgc
atgattcaagaggttttggcttattctgtggcatgtgtgaccgtctcagcctttagcaaa
ggacttctagatgctagcaaggctgcggaggtcatgaacactctacggaatctgactgaa
gagagccagcagactacaggcttctccttggctctagggatggtggttcatggcctgtca
atgtgtggacatggtaaagcagaggacatccatcctcacctgttggcttcttggatgaag
atcttactggctgagggatgtcccacaatgcaccgcctggctgccgtcagtggtctcgta
gctttggttggatcagagagttgcatcattcatctgaaaagtgagctggagatctcctcg
cagcagcagagtcggctgaatgaagttattcgggctgtcacacaggtcgttactctctcg
ggtgccattggcctgcagtccaacagcgcttgcttgctgggtcatctgtatctggcccat
atgtccaacagttgcagtcacagttcagttcctcaggacttcagttatctgcctgaaaaa
agtgtcatcagatcagtcgcgaccttcctcacagaggccgggaaaaaaggtccagacttt
gtccacccggtcctggttaaaaccgctgtgacctctcttgcgtcggtcggggctggtttc
caattcccgcccgtcaactggagcgtttctctctctcctctgatgagactgggttttgga
gaggatgttcagcatcagtgtttggtgctggcagcatctcaagctcactcctctcagagt
gctgctctcttcctgggctcctgggtgtccccaccactcgttcacagcctaagtcaccct
actcgagtgcacctgtatgagagtttaggcttgtggatgaaacatgttgctgaagacaaa
ctccaggtttatgtggacaagctgggcctgcagcatttccaggacaagcagaatccgcac
agtctgtccatgtgccagtcgctgctgcggggccttgctcaggccatggcgctcccaaat
ccccccaaacactgctggacagttctcagttccaccactgagaagatctactccatcctc
cccaatcaaatccaggataatgaagtcggcttgtatgtgggactggccaaatgtctttcg
gagttgtgcgacacagagattgaccgaatcactcgggtcacagaggatcggatggagaaa
gccgccttcatcttagcatatttgacctccaaaggcagacttcctttcctgggactgaat
gatgtcatctcgggcattcgctgtggttggccgggccacagggtgggctggattctcctg
caggctttctaccagtgtcatcggggtaccaaccccagtacaggggtttcgcagcaaatg
gaatggctgttggagctgatgggacacattcgaaacatcgcctatggtgggaaggcagag
ccgtctggagacaccagtgcggccacagacttcctgtttcacgtctttgccgccgctgtc
gtttcctggggcgatcacgtggtgcccctcctccttggcgttagagcgacgtggttgccg
tggcaacccgagtccaagccccaaattctagagcacagcctgtatggcgaagaatctcac
gtcggcaacgcccttcctcattgcctgttgggaatgccgctcagtctggctcagctcctg
agcaaagagccctggagcagccaaaggcacaagttcatagactggctcctgagcatcaca
gaaggccccgaaaagagtttttcagtggctgtcaccaatgcggcaaaagctgctctcttg
gctcttaactccgtccccgaattcaagaagaagctggtgtggacgagagcctacgggtgg
tag
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integrated database retrieval system