Takifugu rubripes (torafugu): 101067930
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Entry
101067930 CDS
T02386
Symbol
puf60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X3
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101067930 (puf60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101067930 (puf60)
Spliceosome [BR:
tru03041
]
Complex A
U2 snRNP components
U2 related factors
101067930 (puf60)
Complex B
101067930 (puf60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
101067930
NCBI-ProteinID:
XP_003968156
Ensembl:
ENSTRUG00000005420
LinkDB
All DBs
Position
10:8779067..8785354
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AA seq
526 aa
AA seq
DB search
MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDPTSGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQEAVAGASVLGALAAPQLLGQQMGIPQAVMAAQAPGVITGVTPVRPPIPVLPQVG
LVNPVLATPPVPSNQVAAAIQQERKEEKEETLQDGTGQEMLSDQEHMSISGSSARHMVMQ
KLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIYQEKQGEEEDADIIV
KIFVEFSAASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaacggagactgcgggtggtgaagctctgacgatggagaatggacagggcaca
ggctccaagcttggccttccgcctctcaccccggagcagcaggaggcactacagagggca
aagaagtatgccatggaacaaagtattaagagtgtgttggtgaagcagaccattgcccat
cagcaacagcagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagcccaaagacagcgcgcgctagccataatgtgtcgg
gtgtatgtggggtccatatactacgagctcggggaggacaccatcagacaggcctttgca
cccttcggtcccatcaagagcattgacatgtcctgggattctgtaacaatgaagcacaag
gggtttgcctttgtagaatatgacgtgccagaggctgctcagctggcactggagcagatg
aattcagtcatgttaggggggagaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccaactggcagaggaggcacgtgcctttaaccggatatacgtg
gcgtcggtccaccctgacctatcggacgacgacatcaagagtgtgtttgaggcctttgga
cggatcaagtcttgtatgttagccagagatcccacttcagggcgacatagaggctttggc
ttcattgaatatgaaaagcctcagtcagcattggacgctgtctcttctatgaacctcttt
gaccttgggggtcagtacctgcgggtgggcaaagcagtgacaccgcctatgcccctactg
acccccacaactcctggtggtctgccaccagctgcagcagtggctgcagcggcggctacc
gctaagataacggcccaggaggctgtagctggtgcatcagttttaggggctttagctgcg
ccccaacttctcggtcagcaaatgggaatacctcaggccgttatggctgcccaggcgccc
ggggtcatcacaggagtgactccagtacggcctcccataccagtgcttccccaggtcggt
ctggtgaaccccgtgcttgcaacgccgccggtcccgtcgaaccaagttgccgccgccatc
caacaggagaggaaggaagaaaaagaggaaacgctccaggatggcacagggcaggagatg
ctgagtgaccaggagcacatgagcatctccgggagcagcgccagacacatggtgatgcag
aaacttctcagaaaatcagagtcaacggtgatggtgctcagaaacatggttggtccggag
gacatagacgacgacctggagggcgaggtgacggaggagtgcggcaagtttggcaccgtc
aacagagtcatcatataccaagaaaagcagggagaagaggaggatgcagacatcatcgtc
aaaatctttgttgagttttctgcagcttcagagatgaacaaagctatccaagctctcaat
gatcgttggttcggtgggcgtaaagtcgtggcagaggtgtacgatcaagaccgttttaac
agcagtgatctctctgcgtaa
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