Takifugu rubripes (torafugu): 101067975
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Entry
101067975 CDS
T02386
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101067975 (snapc4)
03021 Transcription machinery [BR:
tru03021
]
101067975 (snapc4)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
101067975 (snapc4)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
101067975 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_2
DUF1947
SANT_DAMP1_like
Rap1_C
Motif
Other DBs
NCBI-GeneID:
101067975
NCBI-ProteinID:
XP_011617920
Ensembl:
ENSTRUG00000018331
LinkDB
All DBs
Position
21:6167218..6181090
Genome browser
AA seq
1507 aa
AA seq
DB search
MKEIVFKERREEIRSAEDMSLSVLARRDLIQQQVQELEQSLSLTHTDLELLSSETDEGTD
DESDGGTQSVAVLLAERDKIQKEIQNLEDVLGPHSPVCVSDADRSSSSDESELGLALTVE
SCLQVNLVYQQVVQEALEKLETLLRQNEKQQKEVVSQLSGPIKEPHREPCPTSSYQIPIN
MFLGRFLKPYFKDKLTGLGPPANQESKEKSSRMTGCLDNKKVKRWESWQKTLLIHSVSRD
GLRRQIQPKLSKVDYLSQKLLSACGSEKQQLREQIDGLEREIELLREKKEGELIGDRYED
LDWQKISNIDFEGTRDAEDLRCFWQNFLHPSINKSGWSQEEVDTLKQLSRKYEERHWETI
AAELGTGRTGFMCLQTYQRFASDSLKRCSWTTAEDTLLKELVEKMRIGNFIPYTQMSYFM
EGRDPAQLIYRWNNVLDPRLRKGPWTPEEDQLLLRAVSRYGEKDWWKIRMEVPGRHDGAC
RDRYFESLKAETRKGAFDKQETESLRKLVEKHGVGRWAKIAAEIPHRTDAQCLREWRKLN
RIPLCPTKVKKKKKVSKPAKIKRYRSNAPAQKISKRQTKLDKDMEKEIREEEEEEMIVEY
MDSDEEGKKKRKKLKAVMDQSSSVEVEKEVKEEKKEVMYSFPPMPEWTPAENPPAFTVLQ
FRPAEFPSPYQAQDTKNIRSTILGQYGRSVIIGPPPVEQRLEKFFNTSTLMVTSDQLQAH
LSHQADKFRPAVKVPPNTMPRSTHRRMDYELKASVTPWIGNLMIPSRSTVTTAAKLREQG
QKKVLSSTAIFLLFLQTMNVDSVGCKEIIKKRKSEMIFPPSPVLSSQLKDPKTLAGMLQR
RRQKQRLLDFQIQPSLHLEQVQQQQQKQLLHPSPCHQPTTAVPPQASSLQGLTATHQNHS
GTVRQLPPQMNPVLPRAVFIPPSSVPSLQLLTPTFITPPTSSPSVIMAFPFPLSPRPIGP
PVSALLVSGKTSASASASPDLRVSSPLIDTGPDTHKVVSLCMLPPSAAPVRQNAVPDHKP
ACSDTTLSQAQEHLAPPQPILPTAASSLTSPFHDHNYTADLNAAPTGNFDSRMRKQRGKE
SNRTSSSDGQHGVETGQSVGRFLEADCKPASVVVGKRLRKLSQRAIAFQEASKAKAERKK
KRSSPSCKNHHHFCSPDRFLLPRLGGRADQTVSVMGTALMEMSPLLGLPFTLVQKDSDLP
SVIHPATAGPQPPYLKLSSPLNPTPLPSRSILYPVQIPASPPLVFTTPSHHKKMPLPFKL
NFDPSLIFSHSHGAVGDWLSDRRGVVVPGVDVALPYLPPFVSNLTTLSVLLHAKNSLTKS
SLRLLSQVLETRHPQTKPKPCSTTTVTTQPPDLPASAAEPTSAPSMSPTLQRGALEEAGL
VAAVRQLVAERFSSNPAYHLLKARFLSCFTVPALLASIQPVTETTVLQHTSQEEEEEEEE
EEEEQQQLKKIYETGKRERAERSSLQLQGSGAPANHFSGITSTLSIQSETELNLPRLAEN
CDLQCPG
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaatagtttttaaagaaagacgagaggagattagatctgccgaagacatgtct
ctctctgtgttggcccggagagacctgattcaacagcaggtgcaggagttggagcagagt
ctgtctttaacacacactgacctggagcttctgagcagtgagacagatgaaggtactgat
gatgagtcggatgggggtacacagtctgtagcagttcttctagccgagagagacaagatt
cagaaggagatccaaaaccttgaggatgtcttgggaccacatagtcctgtctgtgtgtca
gatgctgacagaagcagcagcagcgatgagagtgagcttggtcttgccttgacagtggaa
tcttgtctccaagtgaacctcgtctaccagcaggtggttcaggaggctctggagaagttg
gagacactcctgagacagaatgagaagcagcagaaggaggtggtgtctcagctgtctgga
ccaattaaagaacctcacagagaaccgtgtccaacctcctcataccagattccaatcaat
atgtttctgggtcgcttccttaaaccctatttcaaggacaaactgacaggactggggcca
ccagccaatcaggagtcaaaggagaagagcagcagaatgactggttgtcttgacaataag
aaagtgaagagatgggagagctggcagaagactttactgattcactcagtatccagggac
ggtctcaggagacaaatccagcccaaactctccaaggtagactacctgagtcagaagctg
ctgtcagcttgtggaagtgaaaagcagcagttaagagagcagatagatggcctggagaga
gagattgaattgctcagagagaagaaggagggagagctaattggggatcgatacgaagac
cttgattggcagaaaatttcaaatattgattttgaaggaacaagggatgcagaggacctt
cgctgcttctggcaaaacttcctccacccgtctatcaataaaagtgggtggagtcaggaa
gaggttgacacactgaaacagctcagcaggaagtatgaagaaaggcactgggagactatt
gctgcagagctggggacgggtaggacaggcttcatgtgtctacagacctatcagcgtttc
gcctctgactcacttaaacgctgcagctggacaacggctgaagatactctgttgaaagaa
cttgtggaaaaaatgaggattgggaacttcatcccatacacacagatgagctatttcatg
gagggtcgtgatccagctcaactgatctataggtggaacaatgtgttggatccaaggttg
agaaaaggtccatggactcctgaagaggaccagttgttattgcgggcagtatctcggtat
ggagaaaaggactggtggaaaatcagaatggaggttcccggtcgtcatgacggtgcctgt
agagacaggtattttgagagtctcaaggcagaaacaaggaaaggagcttttgacaaacag
gagaccgagtcactgcggaaactagtggagaaacatggagttggccgctgggcaaagata
gcagcagagattcctcaccgtaccgatgctcagtgtcttcgagagtggaggaagctgaac
agaatacctctgtgtcccactaaggtaaagaaaaagaaaaaagttagtaaacctgcaaaa
ataaagaggtacaggagcaatgccccagctcagaaaataagcaaaaggcagacaaaactg
gacaaggatatggaaaaggagatcagggaggaggaggaggaggagatgattgtagagtac
atggacagtgatgaagaggggaagaagaagagaaagaaactaaaggcggtgatggaccaa
tcaagcagtgtggaagtggagaaggaggtcaaggaggagaagaaggaggtgatgtactcc
ttccccccaatgccagagtggactcccgcagaaaatcctccagccttcacagtcctccaa
tttcggccagcagagtttccatccccttaccaggcccaggatacaaaaaacatccgttcc
accattctgggacaatatggacgttctgtgatcataggacctccccctgtggaacagcgt
ctggagaaattcttcaacacctctactctgatggtaacatctgaccaactgcaagctcac
ctttcccaccaggcagacaaattccggccagcagttaaagttccacccaacaccatgcca
cggtccacacacaggaggatggactatgagctgaaggcatcagtaacaccctggattgga
aacctgatgatcccctctcgatccacggtgaccactgctgccaagctcagggagcaagga
cagaagaaagtgctctcctccactgccatcttcctgcttttcctccaaaccatgaatgtg
gactctgtgggctgcaaggaaattatcaagaagagaaaaagtgaaatgatatttccacca
tctccagttttatcctcccagctaaaggatccaaaaactctggcagggatgctgcaaagg
aggaggcagaagcagaggctgctagactttcagatacagccaagtctacacctagagcag
gtccagcagcagcagcagaagcaattgcttcatccatctccatgtcaccaaccaactaca
gctgtcccaccacaagcctcttctcttcagggcctcactgcaacccatcagaatcactcc
ggaactgttcgtcagttacctccccagatgaatcctgtgttgcctagagctgtcttcatt
cctccatcttctgttccctcccttcaactcctaactcctactttcatcacccctcccact
tcatctcctagtgtgatcatggccttcccattccctctttctcccagaccgattggtcct
cctgtatctgccctcttagtgtctgggaagacatcagccagtgctagtgcttctccagac
ctccgggtttcctctcctcttattgacactggcccagacacacacaaagttgtctctttg
tgtatgctacccccctcagctgctcccgtcaggcagaatgctgttcctgaccacaaacct
gcctgctctgacaccactctgtcacaagcccaagaacatttagccccacctcagcccatt
ttacccacagctgcctcctctttaacctcaccttttcatgatcacaactataccgctgat
ctcaatgcagctcctaccggtaactttgactcaagaatgaggaaacagagagggaaggag
tcaaacagaacaagcagctctgatggccagcatggagttgagacaggtcaatcagttgga
aggtttcttgaagctgactgtaaaccagcttcagttgtggtagggaagaggcttcggaag
ctgagtcagagagcaatagcttttcaagaagcatctaaggcaaaggctgaaagaaagaaa
aagagatcttccccttcttgtaagaatcaccaccatttttgtagcccagataggtttcta
ctaccgcggttgggaggaagggctgatcaaactgtgtcggtcatgggcactgctttgatg
gaaatgtctccactccttggcctcccatttacactggtacagaaagattcagacctgcct
tcagtcatacacccagctacagctggcccacagccaccctacctaaaactgtcctccccc
ctaaatcccactccccttccttcacgatccatactgtatcctgtccaaattccagcttca
cctccactggttttcacgactccctcccaccacaaaaaaatgccccttccttttaagctc
aactttgatccatccctgatcttttcacactcacatggtgcagttggtgattggctgagt
gatcggagaggggtggtggtccccggagtagatgtggctcttccttatctaccccccttt
gtcagcaatctgaccaccctcagtgtgctgctccatgccaagaactctttgaccaaatct
tccttgcggctactgagtcaggtattagaaaccagacacccccaaaccaagcctaaacca
tgcagcaccaccaccgtaaccacacagcccccagacctgccagcctctgccgccgaacct
acatcagctccctccatgagcccaacgcttcagaggggagcgctggaggaggcggggctt
gtggcagcagtacgtcagctggtggccgagcggttttcaagtaaccctgcctaccattta
ctgaaggcccgcttcctgtcctgcttcactgtccccgccctcctggcttctatacaaccg
gtcacggagacgactgtgctccaacataccagccaggaggaagaggaggaagaagaagaa
gaagaggaggagcagcagcagctgaaaaaaatttatgaaacaggaaaaagagagagagct
gagagatcatcactgcagttgcaagggtcaggagctccagccaatcatttttcaggaatt
actagcaccctctcaatccagagtgaaacagaactgaacctgcccaggctggctgagaac
tgtgacctccagtgtccaggctaa
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integrated database retrieval system
