Takifugu rubripes (torafugu): 101067977
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Entry
101067977 CDS
T02386
Name
(RefSeq) general transcription factor IIH subunit 5-like isoform X1
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03022
Basal transcription factors
tru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101067977
09124 Replication and repair
03420 Nucleotide excision repair
101067977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101067977
03400 DNA repair and recombination proteins [BR:
tru03400
]
101067977
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101067977
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101067977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
101067977
NCBI-ProteinID:
XP_003979070
Ensembl:
ENSTRUG00000023487
ENSTRUG00000025517
UniProt:
A0A3B5JXM2
LinkDB
All DBs
Position
3:complement(6000340..6001681)
Genome browser
AA seq
89 aa
AA seq
DB search
MLCFDHFSFHPLICVAVNMVNVHKGVLLECDPAMKEFLLHLDETMALGRKFILKDLDETH
LFILAEVVQTLQERVGELMDQNSFPITQK
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttttgaccacttcagtttccatccactcatctgtgtagcagtaaacatggtt
aacgtgcacaaaggtgttcttcttgaatgtgatcctgctatgaaagagttcctcctccac
ctggatgagactatggccctcgggaggaagtttatcctcaaagaccttgatgaaactcac
ctttttatattagcagaggtggttcagactctccaggagagagttggcgagttgatggac
cagaattcctttcctatcacacaaaaataa
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