Takifugu rubripes (torafugu): 101068069
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Entry
101068069 CDS
T02386
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101068069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101068069
03021 Transcription machinery [BR:
tru03021
]
101068069
03036 Chromosome and associated proteins [BR:
tru03036
]
101068069
Transcription factors [BR:
tru03000
]
Eukaryotic type
Helix-turn-helix
ARID
101068069
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101068069
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101068069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101068069
NCBI-ProteinID:
XP_011603831
Ensembl:
ENSTRUG00000013351
LinkDB
All DBs
Position
7:11858770..11874481
Genome browser
AA seq
2291 aa
AA seq
DB search
MAAQVASATTLNTSPPSELKKPDRDPKEESVPGEKQSDKKQPGLDSGSPGRGDLQDGSDS
GNAGGGGEPEMKNGNGNPPRANNNNQNDSAGPEGNNHPGFVHHHGPAFPPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSGNIMDPYQPNSHDHGFSNHQFNSYSPFPNRTPYPG
QAYAMNSPRSNQAPTAGGQPANVKQPPPSGGPTAMVGSYNNQRYNIGNPQPTSTPTLNKL
LTSPSSTRAYSNYPSSDYSSQEGASKGPSDMGSSGLYGGSNPAWQQRSHLPSPMSPGSAG
QPLVRNQPPGSMDPMAKMRGQPYGAGSPYSQQSQQGPPTVPQQGPGYPGQGYGSPGQQRY
PVGMQGRAPGGIGGMPYAPQMGSYGQQGPGGYGSQGQAPYYGQPSQAPHTGQQQTPYSPS
PQGQPSGQTPYPGQPHPPSTASHGQAGPPYQQPHMPPQSQGPLSASAQGSPQAQPPYSQA
SGPQSGQSMYGQQQVPPNQAQQQQQSSQDTPGSQGQPSYPGSTQVPPQPPSQQQPQSQAP
PQPTGHSQHPQGQPVAYPQQQQAQQSPYQRFPPPQQEVSQDSFQSNVPPSTQPKSGTEDS
QGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSNQGEQSNQAQSPFSPHTSPHLPGI
RGPSPSPAGSPASSSTPRTGPLSPANMPGTQMPPRPSSVQSDGSLHPAMSQSPMAQDRGF
MQRNPQMPPYGSPQSASALSPRQSSGGQMHPGMGPYQQNNSMGVYAQQGGQYGPQGYPRQ
PGYGSMPNANYPGVGMGPMNPMTGQGAGSPYSGMPPGRMPPNQMGARPYGPNMGPNMGPN
MGPNMPPNMANMPPQVSSGMCPPPVMNRKPQDPAAMQHPPSNSMHNRMPGYHNMSPGMMG
SGPHYGPPMNSMPGMMNTQGGSPYAIGPNIANNSSGMASGPEVNNKMNNKVDGNTTPKPE
PKAKKSNSSTTSNEKITRLYDLGPEPDRKMWVERYLAFVEEKAMGLTNLPAVGRKPLDLF
LLYTSVKGFGGMSQVNKNKKWRDLAASLNVGTSSSAASSLKKQYIQCLYAFECKIERGED
PPPEIFTDNKKSQPAKVQPPSPASLSSTAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPAS
TPHTQMPPLPPGSRSSVNLQDPFSEGNDPAFPRKNLTPNSAYQAGMNTPDMQGRMGTYEP
NKDPFGNMRKVGEQFLPANQGSNSGVGDQQQQQPSQQQQQQQPPPQPPFNRGPPGAMGTM
PMGPRQQYPYGPGYDRRSEQGMGPEGNMGSGAPQPNPMMSANTDTGMYSPNRFPPQQSRH
DSYGNQYPGQGTPPTGSYPNQQPGLYQQQSYKRPVDGVYPPSKRHEAEYSGPFHGGQQPP
QQQQQQGGASAPSSGQPETYNQFSGGGPYPGADRRPTGPGNQFPFPFGRERMQGATGPNA
QPNMPPHMMQSGPEGPQGAMWQGPRDINYQNYPGRQGGPGGPPQGPGYPGMNRSEEIMST
EQRMNHDGQWGGQMGPRQPPYGPGGPGQAMPRSVQANYQPPQGVQNHIPQVSSPASMPRP
MESRTSPSKSPYMHGVMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPPGSIEASHPVLK
PRRRLTVKDIGTPEAWRVMMSLKSGLLGESTWALDTINVLLYDDSTISTFDLNTLPGLLE
LVVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPDALKSDCDNTDEEQEAEEMEHGKEEEE
EEEEPDAYGQTRVKEEKEKEQCQDLRDPDEERKRKGTLSEQTAPSESLTTHQRPKQASKF
DKFPLKVVRKRDPFVDGHSNNHGKLQEFDSGLLHWSAGGGDSTDHIQTHFEPCKDFLERR
ERVTLPPVLLRRQAPEEEMQEDFLSGEEEKQKCEEDDSRGSSSLEKNTAPDKTSPPVHGE
EGKTDPETNVIERGVKSHQENNRPILSSSILTQKSEQSSTILEDEPHSKDEGPLIALADW
QDSLARRCICISNIVRSLSFVPGNDHEMSKHPGLLLILGRLILLHHRHPERKQAPLTYEK
DEESDDGIGQRDEWWWDCLELLRENTLVTLANISGQLDLSLYSESICLPLLDGLLHWAVC
PSAEAQDPFPTLGPNSTLSPQRLVLETLSKLSIQDNNVDLILATPPFVRLEKLYGNLVRL
IGDRKIAVCREMAVVLLANLAQGDTLAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSS
LLHLQGMHFEPTSPDMMRRAARALHALARVEENHGEFTLHESRLLDLSVSPLMNSLVSHV
ICDVLFLIGQS
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccaccactcttaacactagcccgccttccgaactcaaa
aagccggatcgagacccaaaggaagagtcggtaccgggggagaagcagtcagataaaaag
cagccgggcttggacagcggatcgccgggccggggggatctgcaggacgggagcgactct
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaatgggaacccacccagg
gctaacaataataaccagaatgactctgccggaccggagggaaataaccatcccggtttt
gtacatcaccacggaccagcttttcctccaccttcctacggatacagtcagcattacgga
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgtacagtcgggcaacataatggacccatatcaacctaattcacacgaccatggc
ttttcgaaccatcaatttaacagttacagcccattcccgaacaggactccataccccggc
caagcatacgccatgaactcccctcgcagtaaccaggcgccgacagctggggggcagcca
gctaacgtgaagcaaccgccaccgtcgggaggaccaacggcgatggttggatcttacaat
aaccagcgatacaatattggaaaccctcagccaacatccacaccgacactcaacaaactt
ttaacgtcacccagctcgacgagggcatattcaaactacccgtctagcgactacagtagc
caagaaggagctagtaaggggccgagtgacatgggcagtagcgggttgtatggagggagc
aatccggcttggcaacaaagaagtcatctcccgtcgcctatgagcccgggaagtgccggg
cagccgctagttaggaaccagccacctggttccatggacccaatggcaaaaatgagaggc
cagccatacggagcgggcagtccatacagtcagcagtcacaacaagggccccccactgta
ccacaacaagggcctggttaccctggccagggttatggctcaccaggtcaacagcgatat
ccagtgggaatgcaaggacgtgctcctggaggcatcggtggaatgccatatgctccacag
atgggttcttatggacagcagggccctggagggtatggctcacaagggcaggcaccatat
tatggccagcctagccaggctcctcacacaggccaacagcagactccttattcaccatct
ccacaaggacaaccaagtggccagactccttatccaggacaaccccaccctccatcgact
gcttcgcacgggcaagccggcccaccgtatcagcagccccacatgcccccacaatcccag
ggtcctctgtcggcttcagcccaagggtctcctcaggcccagccaccgtactcccaagca
tcaggcccacagtctggtcagtcgatgtatggtcaacagcaggttcctcctaaccaggcc
cagcagcaacagcagagttcccaggatacacctggatcacagggccaacccagttacccc
ggatccacacaggtccctccacagcccccctcgcagcagcaaccacagtctcaggctcca
ccacagccaactggacacagccaacatccacaaggtcagcctgttgcttatcctcagcag
cagcaagcacaacagtcaccttatcagcgcttccctccaccccagcaggaggtatcccaa
gactcatttcagtccaacgtccctccgtccactcagcctaaatctggcacagaggatagt
caaggccgcccctccagccttccggatctgtcagggtccattgatgacctgcccacaggc
acagagggtgctctgagtcctggcgtgagcacatcaggtgtgtctagcaaccagggtgag
cagagtaaccaggctcagtcacccttctctcctcacacatctcctcacctgcctggcatt
cgggggccttccccttccccggctggctcccctgccagttccagcaccccacgcacagga
ccgctgtcccctgccaatatgccaggtacccagatgcctcccagaccatcgagcgtgcag
tcagatgggagtctacatccagccatgagccagtccccaatggcccaggacagagggttt
atgcagagaaatccccagatgccaccttatggttcccctcagtctgcctctgctttgtcg
ccacgtcagtcctctggtgggcagatgcatcctgggatgggtccatatcagcagaacaac
tcaatgggtgtctatgcacagcagggagggcaatatggtccccaaggttatccccggcaa
cctggttatggcagtatgcccaatgcaaattaccccggcgtgggtatgggtccaatgaac
ccaatgacagggcaaggtgcaggatcaccatatagtggaatgcctccaggaagaatgcct
ccaaatcaaatgggggcacgtccatatggtcctaatatgggtccaaatatggggcccaac
atggggccgaacatgcctcccaacatggccaatatgccacctcaggtgagctcgggaatg
tgtcctcctccagtgatgaacagaaaaccccaagaccctgccgccatgcagcaccctccc
agtaactcgatgcacaacaggatgcctggttaccataacatgtctccaggaatgatgggg
tctggaccccactatggtccaccaatgaatagtatgcctggaatgatgaacacacaaggt
ggctcaccttatgcaatagggccaaacatagccaataattcaagtggtatggcctctggc
cccgaagtaaacaataaaatgaataacaaagtcgatgggaatacaacgcccaagccagaa
cctaaagcaaagaaatcgaactcttcgaccacatcgaatgaaaagataacacggctgtat
gacttaggaccagagccagacaggaagatgtgggtggagcgttatttggcttttgttgag
gagaaagccatgggcttgacaaacctgcctgctgtaggccgtaaacccctcgacctcttc
ctgctgtacacatcggttaaaggatttggcggaatgtcgcaggtgaataaaaataagaag
tggcgtgatctggctgcttccctgaatgtgggtacatccagcagtgctgccagctctttg
aagaaacagtacatccagtgtctgtatgccttcgaatgcaaaatcgagcgtggcgaggac
ccccctcctgagatttttacagacaacaaaaagagccagcctgccaaagtccagcctccg
tctccagcatcccttagctctacagctgggtcgggctccttgcaaggtccacagacacca
cagtccaccagtagttctatggctgaaggcggagaccttaaacccccgacccctgcctct
accccacacacccagatgccccccttgccaccagggtccaggagcagtgtaaacctacag
gatcctttttctgagggaaacgaccctgcttttcccaggaagaacctgacacccaactcg
gcctaccaggccggcatgaacacaccagacatgcaaggacgcatgggcacttacgagccc
aacaaggatccctttgggaacatgaggaaagttggagagcaatttctgcctgctaaccag
ggttctaacagtggggtgggtgaccagcaacagcagcaaccatcacagcagcagcagcag
cagcagccgccgccacagcctccatttaacaggggaccaccaggggccatgggtacaatg
ccaatggggcccagacagcagtatccttatggaccaggctatgacaggagatctgagcaa
ggaatgggcccagagggcaacatgggatctggtgctcctcagccaaatcctatgatgtct
gcaaacaccgacactgggatgtattcgccaaatcgcttcccaccacagcagtcaagacat
gattcctatggtaatcagtatcctggacagggaacgccccctactggctcctacccaaat
cagcagcctggattgtaccaacaacagagttacaagcgtcctgttgatggggtttatcct
ccgtcaaaacgtcatgaagcagagtacagtgggcctttccatggtggtcagcaaccccca
cagcagcaacaacagcagggtggtgcttcagcgccctcttcaggacagccggaaacatac
aatcagttcagtggtggcggcccatatcctggtgccgatcgccgtccaactggcccgggc
aatcagttcccatttccctttggccgtgaacgtatgcagggagcaacagggcccaatgct
cagccaaacatgccccctcatatgatgcagtcaggccctgaaggtcctcagggtgctatg
tggcagggaccacgagacataaactatcagaattaccctggtcggcagggtggacctggg
ggcccacctcagggacctggttacccaggcatgaaccgctcagaggaaattatgtctaca
gaacagcgcatgaatcatgatggccagtgggggggtcagatgggacctcgacagcctcct
tatggtccaggagggccaggtcaagctatgcctcggtcagtacaggccaactaccagccc
cctcagggtgtacagaaccacattccacaggtgtccagcccagcctccatgccccgcccc
atggagagtaggacatcacctagtaaatctccttatatgcacggagtaatgaagatgcag
aaggctggccccccagtacctgcttctcatatagtgccccctccagtgcagtcgcctcta
ataaggcgggacatgccttttcccccaggctctatagaagcttctcatccagttctaaaa
ccacgtcggagactcactgtgaaagatatcggaacacctgaggcctggagagtcatgatg
tcactaaagtctggtttactgggtgaaagtacatgggccttggatacaatcaatgttctc
ctctatgatgacagcaccatttccacttttgatctcaacacattgcctggccttttggag
ttggtggttgagtatttccgacgttgtctcattgaaatctttggaattctgaaagagtat
gaagttggagaccccggccagaggacactacttgatcccgatgccttgaaaagtgattgt
gacaacacggatgaagaacaagaggcagaggagatggaacacgggaaagaagaggaggag
gaggaggaagagccggatgcatatggccagactcgtgtcaaagaggagaaggagaaagaa
cagtgccaagatttgcgagatccagatgaggagcgaaaaagaaagggtactttgtctgaa
cagacggctccatcggagtccttaactacccaccagagacctaaacaggccagcaagttt
gacaagtttccattaaaggtggtacgaaagagagacccatttgtggatggacattccaac
aatcatggcaaactgcaggagtttgatagcgggttgcttcactggagtgccggaggaggc
gattcaacagatcacatccagactcacttcgaaccatgcaaagacttccttgagcgacga
gagcgagtaactttacccccagttttgctgaggcgacaggccccagaagaagaaatgcag
gaagactttctatcaggcgaagaggagaaacagaagtgcgaagaggatgactccagaggg
tcctcttccttagagaaaaatacagcaccagacaaaaccagccctccagtccatggcgag
gagggaaaaacagatcctgagacaaatgtgattgagagaggcgttaaaagccaccaagag
aataatagacccattctttcctccagcattttaacccagaagtccgagcagagtagtact
atcctggaagatgaacctcacagcaaagacgaggggccgctcattgcacttgctgactgg
caggattctttagcccgccgttgcatttgtatttccaacatagtccgcagcctgtctttt
gtgccaggcaatgaccacgagatgtccaaacacccagggcttctcctgatactgggacgc
ctgattctgcttcaccataggcaccccgaacgcaaacaggctccgctcacgtatgagaag
gacgaagagtcggatgatggcatcggacaaagagatgaatggtggtgggactgtttggag
ctcctgagggagaacacactggtcacgttggcaaacatctcaggccagctagatctctcc
ctttacagtgagagcatctgtttgcctctgttggatggtctcctccactgggccgtctgc
ccctcagcagaggctcaagacccattccccaccctgggccctaacagcactttgtcacct
cagagactggttcttgagacactaagcaagctgagcatccaagacaacaatgtggacctc
atcttggccactccgccctttgttcggttagagaagctgtacggaaaccttgtgcgacta
attggagacaggaagattgcagtctgcagggagatggctgtggtcctactggccaaccta
gcccagggagacactctggcagctcgagcgattgctgtccaaaaaggcagcgtgggcaac
ttgcttggctttctagaggatagtttggctgccacacagctgcagcagagccagagctct
ctgctacacctgcaggggatgcactttgagcccaccagcccggacatgatgcggcgagct
gcccgggcactgcatgccttagccagggtggaggagaaccacggagaattcacactacac
gaatcccggctcctcgacctttcagtgtctcccttaatgaactcactggtttcccatgtt
atctgtgacgtactctttttaattggccagtcatga
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integrated database retrieval system
