Takifugu rubripes (torafugu): 101068097
Help
Entry
101068097 CDS
T02386
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101068097 (tncb)
04518 Integrin signaling
101068097 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101068097 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101068097 (tncb)
Glycosaminoglycan binding proteins [BR:
tru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101068097 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
DUF7949
Pur_ac_phosph_N
Fn3_Dep-1_2nd
fn3_2
EGF_PEAR1L
Fn3_ROS1
FN3_Tor_3rd
SPE9_EGF_3rd
EGF
Motif
Other DBs
NCBI-GeneID:
101068097
NCBI-ProteinID:
XP_003976110
LinkDB
All DBs
Position
21:complement(5009519..5037235)
Genome browser
AA seq
1693 aa
AA seq
DB search
MGMKIILLACISMSLLFELSTPGLVRKIIRHRREALMPKKSQENITLPLPDQPVVFNHVY
NINVPSTSLCSVDLDLPGGPEVKHETPLKEIQNMEHIEHTEDGDNQIVFTHRITIPKQAC
SCRNQLLDLKTILNRLEMLELELSSLREQCSSGAGCCGAQVTGEISTKPYCNGHGNWSTD
TCSCICEPGWKGHNCSDPECPGDCQDQGRCLNGRCECFEGFGGEDCSNELCLLDCGDYGH
CVNGVCLCEEGFSGEDCSQTSCLNNCFGRGSCHEDECVCDEPWTGYDCSEIICPNDCYDH
GRCINGTCECDEGYTGEDCGDLSCPSHCNNHGMCLNGQCVCQTGYSGEDCSKRSCPKNCN
EKGHCFNGKCICDPGHEGEDCSILSCPDNCNSRGECINGECVCDAGYQGEDCSVLACPNN
CLDRGNCVNGQCMCDKGYSGEDCNIKTCPKNCMGRGDCVDGKCMCFTGFKGKDCGEMTCP
RDCMNQGHCENGKCACHNGYTGEDCSQKTCPKNCHNRGYCIDGDCVCYEGFTGTDCSIIA
CPSDCLNQGHCKNGVCVCEEGFTGEDCSAVSPPKDLTVVEVSPEAVDLSWENEMRVSEYL
IKYAPTVPGGLELDMQVPGDQKKATLLELEPGVEYLISVYALLNNKKSVPVNARVALDLP
KPDGLKFKSVRDTSVQVEWDPIDFPFDGWNLIFRNMKEEDGEILNFLSHPETMFEQSGLG
PGQEYEVKLEVVKNNKRGPPASKNVITMIDSPNHVDIRDVTDTTALVTWMPPVAEVEEVS
ISYGPSSNPADRNMVELSSTETQYHLGGLHPDTQYEVSLTAHKGEWSSNPVHESFLTELD
APKHLKTAEITDESITLEWENSRAQVDNYRIKYGPLSGGEHRELLFTPGAKDYTHAKITG
LRAGTEYGMGVTAVKDERESLPTTTNAVTALDSPKDLIVTKVTETTMLLEWRHPQAKLDS
YRLVYVSADGHRSEEVLPGDLKSYSLMELTPGMLYTISINTERGSRTSAPITISAFTEEE
KPVVTHFTISDVSWDSFHLSWSTKDGAFQAFLIKVTDAETSSDVQNHTLPAAAQSLAISD
LSATTWYRVNLYGLYRGALLAPVYADTITEAEPEIQALLVSEVTPESFWLTWMAEEDALD
TFVIMVSPADDPGHPKELVLGSEKRSVAIANLTEDTEYRIEMFGLSFGRSTKSVQESVRT
DLAPPKGIRFSDVTDTSTTVHWGAPRVRVDSYQITYVPAHGGNAKTLTVDGSKSQTMLPN
LTPGVTYEVTIVAVKGPRESLPASDSITTALDKPRGLVSINITDTGALLRWQPAIATIDG
YVITYSADGVDPVMERVSGNVMEFEMSSLVPATRYTVKVFAARDLAKSTATTTEFTTDVD
TPSHLAASNVQTESAMLTWKAPRAGITGYILSFESVDGAVREVVLSPTAVSYNMAQLSAS
TDYSVKLQAIAGPKRSRVVTAVFKTTGVQYRHPRDCSQVILNGDGSSGLYTIFLSGDENQ
PLQVYCDMNTDGGGWMVFLRRQSGKLDFFRNWKNYTAGFGDINDEFWLGLSNLNKITAAA
QYELRVDLRDKGETAFAQYDRFSVSESRSRYKVHIGGYSGTAGDSMTYHHGRPFSTYDND
NDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKLRP
SNFRNLEGRRKRS
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgaaaattatcctcttagcttgtatatccatgagcctgctctttgaactctcc
actcctggcctggtcagaaaaataatccgccaccgtagagaagctctgatgcctaaaaaa
tcccaggaaaacataaccctgccccttccagaccagccagtggtgtttaaccacgtctat
aacatcaatgtcccctcgacctccctctgctctgtggaccttgatttgccaggcgggcct
gaggtcaaacacgagacaccactgaaagaaatacagaacatggagcatatagagcacact
gaagatggcgacaaccagattgtgttcacacatcgcatcactatcccgaagcaggcatgc
agctgcagaaaccagctgctggatcttaaaactatcctgaataggcttgagatgctggag
ttggaattgtcaagtctaagagagcagtgttccagtggggctggctgctgtggagctcag
gttacaggtgaaatttccaccaaaccttactgtaatggccatgggaactggagcaccgac
acatgcagctgcatctgtgagcctggatggaaaggccataactgcagcgatcccgagtgc
cccggtgactgtcaggaccagggtcgctgcctgaatggcagatgtgaatgctttgagggt
tttggtggtgaagactgcagtaacgagctctgcctgctggactgtggtgattatggtcac
tgtgtcaacggtgtctgcctatgtgaggagggcttcagcggggaggactgcagccagaca
agctgcctcaacaactgcttcggccgtggaagttgtcatgaagatgaatgcgtttgtgat
gagccatggactggatatgactgctctgaaatcatctgtccaaatgactgttacgatcat
ggccggtgcattaatggcacctgtgagtgtgatgaaggctacactggggaagactgcggt
gatttatcctgtcctagtcattgtaacaaccatggcatgtgcttgaatggccagtgtgtg
tgtcagactggctacagtggagaggattgctcaaagcgctcctgtccaaagaactgcaac
gagaaaggccattgtttcaatggaaaatgtatctgtgatccaggacacgaaggtgaagac
tgctccatcctctcatgccccgacaactgcaatagcaggggcgagtgcattaatggagaa
tgtgtgtgcgatgctggctaccagggtgaagactgcagtgttctcgcctgtcctaacaat
tgtctggaccgcggaaactgtgttaatggacagtgcatgtgtgacaaaggctacagcggg
gaggactgcaatattaagacctgtccaaagaattgcatgggacggggggattgcgtggat
ggcaagtgtatgtgcttcactggttttaaaggcaaagactgtggtgagatgacctgcccc
agagactgtatgaaccaggggcactgtgagaatggaaaatgtgcttgccataatggttac
acgggcgaagattgcagtcagaagacgtgtcccaaaaactgtcataacagaggctactgc
attgatggtgactgtgtatgttatgaaggtttcactgggacagactgctccataattgct
tgcccaagtgactgcctaaaccagggacactgtaaaaatggagtatgcgtctgtgaagaa
ggattcacaggagaggactgttcagcggtctcaccacccaaggacctaacagtagtggag
gtgtcaccggaggccgtggacctgtcctgggagaatgagatgcgtgtttcagagtactta
ataaagtatgcacccactgttcctggaggcctggagctggacatgcaggtacctggggac
cagaagaaggccacattgctagagcttgaacctggagtggaatacctgatcagtgtctat
gctttgctcaacaacaagaagagtgttcctgtcaatgctagagtagctttggatttgcca
aagcctgacggactcaagttcaagtcagtgcgagatacatcagtgcaggtagagtgggac
ccaattgactttcccttcgatggctggaacctcatctttagaaacatgaaagaagaggat
ggcgaaattctgaactttcttagccatccagagaccatgtttgagcagtcaggcttgggc
cctggccaagagtatgaggtcaagctggaggttgttaaaaacaacaaacgcggaccacct
gcttcgaagaatgtgatcacaatgatcgattccccaaaccatgtagacatccgtgacgtg
acagacaccacggcactggtgacctggatgccgcctgttgcagaggttgaggaggtgagt
atttcttatggacccagctccaaccccgcagaccgcaacatggtggagctgtcatccact
gaaacccagtaccacctgggaggcctccaccctgacacccagtatgaagtttctctgaca
gcccacaagggagagtggagcagtaatcccgtccatgagtcttttctgacagagctggat
gctccaaagcacttgaagacagctgaaataacagatgagagcatcactcttgagtgggaa
aacagtcgagctcaggttgacaactaccgcatcaagtatggacctttgtctggaggagag
cacagggaactactctttaccccaggagccaaagactacacccatgccaaaatcactggc
ctgagagccggcacagagtatgggatgggtgtaacagcagtgaaagatgagcgggagagt
ttgccaacaaccaccaatgcagtgacggcactggattctccaaaggacctaattgttacc
aaggtgacagagaccaccatgttgctggaatggagacacccccaggctaaactggactct
tacaggctggtttatgtatctgccgatggccacagaagtgaggaggtactgccgggtgat
ttaaagtcatacagcctgatggagctcacccctggcatgctttacaccatcagcatcaac
actgagaggggcagcaggaccagtgcacccataaccatctcagcattcacagaggaggag
aagccagttgtgacccatttcaccatcagtgatgtgtcctgggacagctttcatttgtcc
tggtctaccaaggacggggccttccaggccttcctgatcaaggtcacggatgcagaaacg
agttctgatgtccagaaccataccctgcctgctgctgctcaaagtctcgccatctctgat
ctctctgctactacctggtacagagtcaatctgtatgggttgtacaggggggctctctta
gctccagtctatgctgacactatcacagaggctgaaccagagatccaggccctcctggtc
tctgaagtcacccctgagagtttttggctgacgtggatggctgaggaggatgctttggac
acctttgtgataatggtcagcccagctgatgacccaggtcatccaaaagagcttgtgctg
ggaagtgagaagcgaagcgtagccattgcaaaccttacagaggatacagagtacagaatc
gaaatgttcggcctcagttttggaagaagcaccaaatctgtgcaggaaagtgtcagaaca
gacctggcccctcctaaaggcatacgcttctctgatgtgactgacacatccaccactgtt
cactggggggctccaagagttcgagtggacagctatcagatcacatatgtccctgctcat
ggaggtaatgctaagacactcacagtggatggttccaagtctcagaccatgctgcccaac
ctgactcccggagtcacctatgaggtcacaattgttgctgtcaaagggccacgagagagt
ctgccagcatcagacagcatcaccacagctctggataaacctcgtggattggtttctata
aacatcacagatactggagctctgttgcgctggcagccagctattgctacaatagatggt
tacgtcatcacgtacagcgcagacggagtggatccagtgatggaacgtgtttctggaaat
gtgatggagtttgagatgagctcattggtgcctgcaacacgttacaccgtgaaggtgttt
gctgccagagacttggccaagagcacagctacaaccactgagttcacaaccgatgtggac
acgcccagtcatttggcagccagtaatgtccaaacagagagtgccatgttgacctggaag
gcaccacgtgctggaatcactgggtacatcctcagctttgagtctgttgatggcgctgtc
cgtgaagtggtcctgagccccaccgctgtgtcctacaacatggctcagttaagtgcttcc
acagattattccgtcaagctgcaggccattgccggtccaaagaggagcagagtcgttaca
gccgtcttcaaaaccactggtgtgcagtacagacatcctagagactgttcccaggttatc
ctgaatggtgatggttcttcgggcctgtacaccatcttcctcagtggcgatgagaaccag
ccactccaagtctactgtgacatgaacactgatggtggtggatggatggtttttctcaga
cggcaaagtgggaaattggattttttccgcaactggaagaattacacagctgggtttgga
gatataaatgatgaattttggctgggtctgtccaacctgaataagatcacagcagcagct
cagtatgaactcagagtggatctgagggataaaggtgaaacggcctttgctcagtatgac
aggttctctgtctctgagtctcggagccgctacaaagtccacattggaggctacagtggg
acagcaggggattccatgacctaccaccatggccgcccattttccacctacgacaatgac
aacgacattgcggtcaccaactgcgccctgtcatataagggagcgttctggtacaaaaac
tgccaccgggtcaacctcatgggacgatatggagataatagccacagcaagggtgtgaac
tggttccactggaaaggtcatgagcactcaattgagtttgctgagatgaagctgaggcca
tccaactttagaaacctggagggaagacggaaacgctcctaa
DBGET
integrated database retrieval system
