Takifugu rubripes (torafugu): 101068323
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Entry
101068323 CDS
T02386
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101068323 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
101068323 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101068323 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
tru03029
]
101068323 (rb1cc1)
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101068323 (rb1cc1)
Membrane trafficking [BR:
tru04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101068323 (rb1cc1)
Mitochondrial biogenesis [BR:
tru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101068323 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
101068323
NCBI-ProteinID:
XP_011614394
Ensembl:
ENSTRUG00000005744
UniProt:
H2SNH0
LinkDB
All DBs
Position
22:complement(2242973..2251892)
Genome browser
AA seq
1586 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQTKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTETNPIFLFNKEMILSDRDPAIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLEDCTTSCQKLLLKFENSYLSYQQ
DLEEIKTKLSKLGTAVAVMARIPLLECLTRQSYRESVERSGSTPGKESDETEEGEKSTDS
VLRAGPGSSESPGGGQEAGEMSDSGGLRAILDEAANPTCFNVTLLDWINVQDRPNDVESV
VRKCFESINRLDPRIIQPFLGDCRDTIAKLDNHNMKSIKGLEDRLYALDQMIASCKKLVN
EQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLNNHRKLLDIKKKCTTAKQEL
TNNLQVRLKWCCYVMLHADQDGEKVQALLRLLTELLERVRVVEALSNVPQMYCLAVAEVV
RRKMFMRHYREWAYSLVKDGKLLYDAEKLKRESFGKLFRKSFLRNRLFKGLDSWPPRAFC
TQKPRRFDDELPDISVEDLQYLKSCCPVEVQPFLMVPAVCDFEPLNRHVDALHHLVQAAQ
SVDEMSQTITDLLSEQRESYSRSSHRSTAATPQSESIAGTTASASSKTPPSLSLQGTSCQ
ALHVPVLAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLDSLAESPESDFMSAVN
EFVIEETLTSPNPISDPTSPEMMVESLYSSVINAIDSKRMQATTILERENARVAAFRRVI
EKYQSAAEETRSGVRSVKDDLCHLRTAVLKEQKDFGFVLRSVGAEVRNICHDHQLETTER
HQKELLSLRQELEEQVRTLTEENQVNRNIVRDVQRAMLDLEGLVERKEKELVQLENEKER
LAEAERKQKDLIRNLEQATSRQEEEIEVLAASNGSLSARLKDLHAEIERSRKEIREELEV
AEQTRLKELEDQLKQEHQAELESLSEEHRKALEDLAAENGAKLIETLDQHASELGEKERR
VTDLECRGAELAELRCKLEVELALKEAETEELRGLFEEARTQQAEAVRSRVESETRDLGE
ELACVQKQLRLKNEEYEVHLSELRTLMRIEKDHCISELVDRHEEEAVALRNEIASLREQA
EDAARAHGEQQERLRQEAEQKVCAAVEEKGRQWRSFQDLEQELRTLIGKLQAENELLSKK
VETDASRAASSDAFEELQQQKDEMEQKLLENIRHLETELQQRPPSKSDGGLSLHAERSAD
AAAPLSLDSAIQERLQQERASLQSQMELLEKQKNEEIQNLKTSLIAEQQTNFNTVLTREK
LKKEQIISELTEKLRNVTQQQDKDKALIETLSEDRASVMQEKKHLEEELNRLRSAALVSS
AFFATNPSAQELPRAGADAGARALPGGGACFSEPTPETDRLASVAEDEGVDSAVEASMVT
VHENMLMSEEKQRILLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGD
LVLIILDERHDNYVLFTVGPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAK
KAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacgttgacgtttgacaccgacctc
gccgtccagactgtgctggaactcaaacatgccatccaaaccaaatacaagatcgccatc
cagcaccaggtcctcgtggtcaacggaggcgagtgcatggtggcggagcggcgtgtgtgc
agctacagcgccggcactgaaaccaaccccatcttcctgttcaacaaagagatgatcctg
agcgaccgggatcccgccatccccaaaaccaccttctccatcgagagcgagatccaggtg
aaggtggaggagtccctcctgatgccggctgtctttcacaccgtcgcctcgcggacgcaa
ctcgccctggaaatgtttgaagtggccaacaaactgagctccttctgcgagcggttggtg
cacgacgagcacctccagcaccagggctgggccgccatcatggccaacctggaggactgc
accacgtcctgtcagaagctgctgctcaagttcgaaaactcctatttaagttaccaacag
gacctggaagagataaagaccaagctgtcaaagttggggacggccgtggccgtcatggcc
aggatccctctgctggagtgtctgacgcgccagagctacagagagagcgtggagcggtcc
ggctccaccccggggaaggagtccgacgagacggaggagggagagaagtccacggattcg
gtgctccgcgccggccccgggtcctcggagtcgcccggcggaggccaggaggccggcgag
atgagcgacagcggcgggctgagggccatcttggacgaggccgccaacccgacctgcttc
aacgtcaccctgctggactggatcaacgtgcaggaccggcccaacgacgtggagtcggtg
gtcaggaagtgcttcgagtccatcaacaggctggacccccgcatcatccagcccttcctg
ggcgactgccgcgacaccatcgccaagctggataaccacaacatgaagtccatcaagggg
ctggaggaccgactctacgccctcgaccagatgattgcgagctgcaagaagctggtgaac
gagcagaaggaactcgctcagggatttttggccaatcagaagcgagcggagaacctgaag
gacacgtcggttctgccggacttgtgtctgagccacaccaaccagctgatgatcatgctg
aacaaccacaggaagctgctggacatcaagaagaagtgcaccaccgccaagcaggagctc
acaaacaacctccaagtccgcctcaaatggtgctgctacgtgatgctccacgcggaccag
gacggcgagaaggtccaggctctgctccggctgctgacggagctgctggagagggtgagg
gtggtggaggccctcagcaacgtcccgcagatgtactgcctggcggtggcggaggtggtc
aggaggaagatgttcatgcgccactacagagagtgggcgtattcgctggtgaaggacggg
aagctgctgtacgacgcagagaagctgaagagggaatcgttcgggaagctcttccggaaa
tccttcctcaggaaccgcctgtttaaaggactggattcgtggccccccagggccttttgt
acgcagaagcccaggaggttcgacgacgagcttcctgacatctccgtcgaggacctgcag
tacctgaaatcgtgctgccctgtcgaggtgcagccgttcctaatggttcccgccgtgtgt
gactttgaacccttaaatcgccacgtcgacgcccttcaccacctggtccaggctgctcag
agtgtggacgagatgtctcaaacgatcaccgacctgttaagcgaacaaagggaatcgtac
agtcggagctcgcatagatcaaccgccgcgaccccgcagtctgaaagcatagctgggacg
acggcgtccgcgtcctccaaaacccccccctcgctcagtcttcagggaaccagctgccag
gcccttcatgttccggtcctggctcctctggaggacttatccccagacagcatcgacgct
cagacgtttgactttgaaaccatcggccaccccaacatggatccagtgttgcagcagggc
tccctggatctggactctctggcagagagtccagagtccgacttcatgtctgccgtcaat
gaattcgtcatcgaggagaccctgacctccccgaaccccatcagcgaccccaccagcccc
gaaatgatggtggagtctctctattcctcggtgattaacgccatcgacagcaaacgcatg
caggccacgacaatcctggagagggagaacgccagggtcgccgccttccgacgggtcatc
gagaagtatcagtcggctgcagaggagacccggagcggcgttcggagcgtgaaggacgac
ctctgtcacctgagaaccgccgtgttaaaagagcagaaggactttgggtttgtcctgagg
agcgtgggcgcagaggtgcgaaacatctgccacgaccaccaactggagacgacggagcgg
caccagaaggagcttctgtccctccggcaagagctggaagagcaggtccggacgctaacg
gaggaaaaccaagtcaatcggaacatcgtccgggacgtccagcgcgcgatgctcgacctg
gaggggctcgtggagcgcaaagagaaggagctggtccagctcgagaatgagaaggagcgc
ttggccgaggcggagaggaagcagaaggatctgatccggaacctggagcaggcgaccagc
aggcaggaggaggagatcgaggtgctcgcggcttccaacggctccctgtccgctcgcctg
aaggatctgcacgctgagatcgaacgcagtcggaaggagatccgggaggagctggaggtt
gcggagcagacccggttgaaagagctggaggaccagttgaagcaggaacaccaggcggag
ctcgagagcctcagcgaggagcaccgcaaggccctggaggatctggctgctgagaacggc
gccaagctgatcgagactctggatcagcacgccagcgagctcggagagaaggaaaggcgg
gtgacggacttggagtgtcgcggcgcggagctcgcagagctgcgctgcaaactggaggtg
gagttggccctcaaggaggcggagacggaggagctgaggggcttgtttgaggaggccagg
acgcagcaggccgaggctgtgaggtcccgggtggaatcggagaccagggacctcggggaa
gagctcgcgtgcgtccagaaacagctccgcttgaagaacgaggagtacgaggtgcacctg
tccgaactgaggaccctcatgaggatcgagaaggaccactgcatctccgagctggtggac
aggcacgaggaggaggccgtcgcgctgcgcaacgagatcgcctccctccgggagcaggcg
gaggacgccgcgagggctcacggcgagcagcaggagaggcttcggcaggaggccgagcag
aaggtctgcgctgcggtggaggagaaaggacggcagtggaggagcttccaggacctggag
caggagctgaggactcttatcggcaagttgcaggcagaaaacgagctgctgtccaaaaaa
gtggaaacggacgcgtcgcgggcggcgtcttcagacgccttcgaggaactccagcagcag
aaggacgagatggagcagaagctcctcgagaacattcggcacctggagacggagcttcag
cagaggccaccctcaaaaagtgacggagggctgtcgctgcacgccgagcggagcgccgac
gccgcagccccgctgtccttggactccgccatccaggagcgtctgcagcaggagcgggct
tccctgcagtctcagatggagctcctggagaagcagaagaacgaagagatccagaacctc
aaaacctctctgatcgccgagcagcagactaacttcaacaccgttctaacccgcgagaag
ctcaagaaggagcagatcatcagcgagctgacggagaagctgcggaacgtcactcagcag
caggacaaggacaaagcgctgattgagacgctgtcggaggaccgagccagcgtcatgcag
gagaagaagcacttggaagaggagctgaaccgcctgcgcagcgccgccttggtctcctcc
gccttcttcgccaccaacccctcggctcaggagcttcctcgcgccggagcagacgccgga
gcgcgggctctgcccgggggcggggcttgtttctccgagcccacgcccgaaaccgacagg
ctggcctctgtcgcggaagacgaaggggtggattcggcggtggaagccagcatggtcaca
gtccacgagaacatgctgatgtccgaggagaaacagcggatcctcctgctagagcggacg
ttacacatgaaagaggaggagaacaaacgcctcagtcagagactgatgtctcagagcatg
tcgtctgtgtcctcgcggcactctgataaaatcgccattcgagatttccaagtaggcgat
ttggttctcatcatcctggacgagagacacgacaactacgtgctgttcacagtgggaccc
accctctacttcctccactcggagtccctcaccgcgcttgacctcaaaccagcctcgggg
acgtcgaggcggccgtgggtcctcggaaaggtgatggagaaggaatactgtcaagccaaa
aaggctcagaacaggttcaaggttcctttggggacaaagttctacagagtgaaagctgtt
ccatggaacaggaaagtatag
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