Takifugu rubripes (torafugu): 101068357
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Entry
101068357 CDS
T02386
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101068357 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101068357 (bard1)
04121 Ubiquitin system [BR:
tru04121
]
101068357 (bard1)
03036 Chromosome and associated proteins [BR:
tru03036
]
101068357 (bard1)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101068357 (bard1)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101068357 (bard1)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101068357 (bard1)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101068357 (bard1)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101068357 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_5
Ank_3
Ank_4
BRCT_2
BRCT
zf-RING_5
zf-RING_10
zf-RING_UBOX
PTCB-BRCT
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
101068357
NCBI-ProteinID:
XP_003962054
Ensembl:
ENSTRUG00000014666
LinkDB
All DBs
Position
1:21292156..21303350
Genome browser
AA seq
791 aa
AA seq
DB search
MDAYVNEQTSDWKNTKEAVANFRRLLLCSKCSELMKEPVCLGMCEHVLCRSCAGPQAGDG
CVVCHRPAWVKDIQINRQLSSIIQVFSNLESLLKPTEQPDCSPDNTKAEPEHSVFKQKKN
LKIWFSPRSRKVRCLVETPSEVTSPESGSKRGAGPAMSANNSAQPGDMSIFNFTSSSQDS
GSSSSPNSKNKSSNKKRSAKKNASSRDMVQCASRSRRKPTKETMKKNKLEAINQRWGITG
ETDSPNKKGQACVEGVRRSTKRVSFLSPVVTSDDPQLEVPQASNNDHRPDTDTVQGNLSE
NNSVLNEQTQSSQNISPSVIRSEAPSVICPSFGDSPAKRDYVSPLKRPSETCKADGKVTT
LESTPKRPRVSPARGRKSQISPTVLNPPSSASPGCDKKKIYSGRQQCQSPPVHRSPLSQR
SASGSPAVLKRNHKGETPLHIASIKGDAEAVKELLDQGADPNMKDNAGWTPLHEACNLGH
LGVVEVLVSGGALLNTPGYENDSPLHDAVRNGQLAIAQLLLQLGASANVLNLYGKRPADY
AASLEMREIFQNASDGMATSLSPSASLSVVSGSVRREEIVLLATRLSQPEQQQLVRLGKL
LGGRVADTFSASVSHIVVPEGQMCTTLSTLSGLLAGCWVVKHSWVKTCLQAGKWMPEAEH
EAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKSPSKDELARLLREGGGQLLSRRPKPDS
DVTQTVSAAAYHAPPGSDQALCTQYVVFDPRGRHRPAVGRRGKVWSAPSTWIIDCIAAFS
LLPVPDPQTLD
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctatgtcaacgaacagacaagtgactggaaaaacaccaaggaagccgttgcg
aatttccgacgattgctgctttgctctaaatgctcagaattaatgaaagaacctgtgtgt
ctgggaatgtgcgagcatgtgctgtgcagatcctgtgctggcccccaagcaggagatggc
tgtgtggtgtgccaccgtcctgcatgggtcaaggacatacaaatcaacaggcagctaagc
agcatcatccaagttttctctaatttggaatctctgctcaaacccactgagcagccagat
tgctctccagataacactaaagcagaacccgagcactctgtctttaaacaaaagaaaaac
cttaagatctggttcagcccccgcagtcgtaaggtacgctgtctggtggagacaccctca
gaggtcacttcaccagaaagtggatctaagagaggggcgggaccagcaatgtcggccaac
aattccgctcaacctggggacatgtcgattttcaatttcacctcatcttctcaagattcg
ggctcatcgtcctctccaaattccaaaaacaaaagcagcaacaagaagaggtcagctaag
aaaaatgcttctagcagggatatggtgcaatgtgccagcaggtccagacgaaagccgacc
aaggagacgatgaaaaagaataagttggaggccataaaccaacgatggggcattacaggg
gagacagattctccaaataagaagggacaagcctgtgttgaaggtgtgaggaggtccact
aagagggtttccttcttaagccctgttgtcacatctgatgatcctcagctggaggtacca
caggccagtaataatgaccacaggcctgacacagacaccgtgcaggggaatctctcagaa
aacaactcagtcctgaatgagcaaacacagtctagtcagaatatttcaccaagtgttatc
aggagtgaggcaccatctgtcatttgccccagctttggtgatagtccggccaagcgcgac
tacgtttctcccttaaagcgtccctcagaaacatgcaaagccgatggcaaagtcaccaca
ttagagagcactccaaaaaggcccagggtctcaccagccagggggagaaaatcacagatc
tctcccaccgtactcaacccgccttcttcagctagtccagggtgtgataagaagaaaatc
tattctggacggcagcaatgccaaagcccacctgtccataggtctccattgtcccagcgg
tcagcatcaggaagtcctgcagttttaaagaggaatcacaagggagagacgcctctgcac
atcgcttcaataaagggggatgccgaggctgtgaaggagctgttggaccagggggccgac
cccaacatgaaggataacgctgggtggacacctctgcatgaagcgtgtaacctgggacac
ctgggggtggtggaggtgctggtgtctgggggagccctgctgaacacgcctggctacgag
aacgactctccccttcacgatgcagttcggaatggacagcttgccatcgcccaactgttg
ttgcagctcggcgcctcagcgaacgtacttaatctctacggaaagcggcctgcagattat
gctgccagcctcgagatgcgggagattttccagaatgcctcagatggaatggcaacatct
ctgagtccctcggccagtctctctgtggtgagtgggagtgtgaggagggaagaaatagtg
ctcttggccactaggttgtcgcagcccgagcagcagcagctggtcagactggggaagctg
ctgggagggagagtggctgacaccttttctgcctcagtgagccacattgtggtgcctgaa
ggacaaatgtgcaccaccctctccaccctctcgggtctgcttgctggctgctgggttgtc
aaacacagctgggtgaagacgtgtctgcaggcaggaaagtggatgcctgaagcggagcac
gaggcaggagagggcccgcagcgcagccgcatcaacagatgcagcctgctgccgccgctc
ttcgacggctgcttcttcttcctcctcgggtcttttaagtcgccatccaaagacgagctc
gccaggctcctcagggagggaggaggtcagctcctgagccgacggcccaagcccgacagc
gacgtgacgcagacggtgagcgcggccgcctaccacgcgccgccgggctccgaccaggcc
ctgtgcactcagtacgtggtcttcgacccgcgggggcgtcacaggccggcagtggggaga
cgggggaaggtgtggtcggctccatccacatggatcatcgactgcatcgcagccttctcc
ctccttcctgtgccggaccctcaaactctcgactaa
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