Takifugu rubripes (torafugu): 101068393
Help
Entry
101068393 CDS
T02386
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101068393 (zc3h12a)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101068393 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
101068393
NCBI-ProteinID:
XP_003969270
Ensembl:
ENSTRUG00000010565
LinkDB
All DBs
Position
12:complement(9754393..9759085)
Genome browser
AA seq
581 aa
AA seq
DB search
MDPSADPQHHPAQMDFFHKLGYSTAQVQAIQQQFGPNTDTDKVLGELVRIGAGQEAKQEP
VTTVSVLVPRGNHQNSSPTVQLPLPSSAAGGEDKHGEDDVLRPIVLDGSNVAMSHGNKEV
FSCLGIQLAVNFFLERGHTHITVFVPSWRKEQPRPDVPITDQHILRDLERKKFLVFTPSR
RVAGKRVVCNDDWFIVKLAYESDGIIVSNDMYRDLQGKEPEWKRFIEERLLMYSFVSDKF
MPPDDPLGRYGPTLENFLRKFPKTQKKPLCPYGKKCTYGTKCKYHHPERASKSSHSSSVE
LRDQAKQPWTSQRPPSAPSTPVLGQSLSLVEDMAKKLTLGPESGFSKTLKDHKHEYMSQL
KASQCPSKRATCRKEKSSQHSPSDHSLQDSGSQEQLDSGLGSIDSQLMEGPWSDHFYGVK
HSGSQHSQLYSPPRNAPCRCCSHSPFSEGTASASYHQQYNGGYVSRPRSDVTAYGPSHYT
SYASYPVSMPTYIDRHWSEPYGSNPWVVQNRPAEHFHWGPPQVEQQTPSGLKEREAVRKK
LLAIFSAHLVDAAMTRFPELMDPELLVAEILKLQSESRSLR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatccctctgcagacccccagcaccacccggcccagatggacttcttccacaagctg
ggctactccacggctcaggtccaggccatccagcagcagtttggccccaacacggacaca
gataaagtcctgggcgagctggtccgcatcggagctgggcaggaggccaagcaggaaccc
gtgaccaccgtgtctgtgctggtgcccagagggaaccaccagaattcatcccccaccgta
cagctgcctttgccctcatctgctgcaggtggagaggacaaacacggggaggacgatgtt
ctcagacccatcgttcttgatgggagcaacgtggccatgagtcatgggaacaaggaagtt
ttctcttgtttgggaatccagctagctgtgaacttcttcctggagcgtggccacactcac
attactgtctttgtcccatcgtggcggaaggagcagcccaggccagacgttcctatcaca
gaccagcacattctgagggacctggagcggaagaagttcctggtgttcacaccctcacgc
cgcgtggcaggaaaacgagtggtgtgtaacgacgactggttcatcgtaaagttggcctac
gagtccgatggcatcatcgtgtccaatgacatgtaccgggacctccagggaaaggaaccg
gagtggaagcgcttcatcgaggagaggctgctcatgtactccttcgtcagtgacaagttt
atgcctcccgatgaccctctcggccgctacggtcccactttggagaactttctacggaaa
tttccaaagacacaaaaaaagccactgtgtccttatggaaagaagtgtacatatggaacc
aaatgcaagtaccaccaccccgagcgagccagtaagtccagtcactcaagtagcgttgag
cttcgggatcaggccaagcaaccctggacttcccagagaccaccttcagctcccagcact
cctgtgcttggacagagcctctctctggtggaggacatggcaaagaaactgactctggga
cctgagagtggcttctccaagacactaaaggaccataaacatgaatatatgagtcagctg
aaagccagtcaatgccccagtaagagagccacatgcaggaaggagaagagcagccagcac
tcaccttcagaccacagtttgcaggacagtggatctcaggagcagctggactctggttta
ggctccatagacagtcagctgatggagggtccttggagtgaccacttttatggggtgaaa
cacagcggctcacagcacagccagctgtacagccctcccagaaatgccccttgcaggtgc
tgctcccacagccctttttctgagggcaccgcatctgcctcgtatcaccagcagtacaac
ggtgggtacgtcagcaggcccagatccgacgttaccgcgtacgggcccagtcattacacc
agctacgccagttacccagttagtatgcccacatacattgatcggcactggtccgagcct
tatggttctaacccttgggtggtgcagaaccgtccagcggaacacttccactgggggcct
cctcaggtggagcaacagacccccagtggtctgaaggagagagaagctgtgaggaagaag
ctcctcgctatcttcagtgctcacttagtggacgcagccatgaccaggtttccagagctg
atggatccagaactgttggtggctgagatcctgaagctgcagagcgagagcaggtcgctg
aggtga
DBGET
integrated database retrieval system