Takifugu rubripes (torafugu): 101068597
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Entry
101068597 CDS
T02386
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101068597 (rc3h2)
04121 Ubiquitin system [BR:
tru04121
]
101068597 (rc3h2)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101068597 (rc3h2)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101068597 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf_CCCH_4
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101068597
NCBI-ProteinID:
XP_029693611
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All DBs
Position
6:11520995..11530959
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AA seq
955 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSEHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQASLEIPEVRLVSLNGAAEVKSYEVCRVCVEELALYLRPLSAAK
GVASVCPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNSQQL
SANLWAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASK
TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRIS
PEQWSSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTNLRPHLEL
LANIDHNPDAPTPPWDELERVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQPNSKYKTSMC
RDLRQQGGCPRGSNCTFAHTQDELEKFRLRNKKSSAAGRVFPLAPGIMGKTFALEAGLHT
DAPAGVAQGLKGDTTTVLVEGVAGGTHHKLISRGADAMEDLKRAAPNGSSGANGSNGLTG
SASTEQKCASPPRIPVSHSSSMSPAATAGWGDSGAPGAFLLRTPHLSQAADAYYQEPHPV
PEPAHFQSSCECSYYASALHPPHKTCMAQFLRSSNVPESSLPPSAGPPSPFDPHPPHPHA
SSSSGYPPRDRMGPPSFHAHPGQPQYGPVVAAHGVYAPLYDSRRVWRPQLYHREDARSNS
LPLEVLHSSVYQPPLRERFNSLDSNFCAGAERRLHRDCGHVRLGYDDLFRRKQEQWAHHH
HHHHHHNASRPSPSSPIFTIDFGPEHAESGGGQCAACRFRGEENLARYSPWSCGAIGPCL
SPFDPHKPAPSCAEHPELDGSTAGGGEKRWLHSMDHYRRLKDEDPIIPFSEAPIISKWGA
ISRAARAGYHTADPICQGAAATAAAINLKDSSPHLDHRWSSRGSDSFQPLQFPGE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggctcagtggacggagttcctgtcctgccccatctgctacaatgag
tttgacagcagcgagcaccagcccatcagcctgggctgctcccacacggtgtgcaagacc
tgcctccacaagctgcaccgcaaggcctgccccttcgaccagacgcccatcagcaccgac
atcgacctgctgcccgtcaactgcgccctgctgcagctggttggagctcaggcgagtctg
gagatcccggaggtgcggctggtgagcctgaacggtgccgcggaggtcaagagctacgag
gtgtgcagggtgtgtgtggaggagctggctctctacctgagacctctgagcgccgccaaa
ggtgtggcgagcgtgtgccccagcgtgctcagtcggcccatgcagaggaagctggtgacg
ctggtgaactgccagctggtggaggaggagggccgcgtgcgggcggtgcgggcgggacgc
tcgctgggggagcgcaccgtcaccgagctcatcctgcagcaccagaactcccagcagctc
tctgccaacctgtgggccgccgtgagggcccgcgggtgccagttcctggggcccgctatg
caggaggacgcgctgaagctggttctgctggctctggaagacggctccgctttatccagg
aaggtgctggtgttgttcgtagtccagaagctcgaggcccgcttcccgcaagcctccaaa
accagcataggacacgtggtgcagcttctctacagggcctcctgcttcaaggtgacaaag
cgcgacgaggactcgtccctgatgcagctgaaagaagagtttcggacgtacgaggccctc
aggagggaacacgacgcccagatcgtccacatcgccatggaggccggcctgcgaatctcg
cctgagcagtggtcgtctctgctgtatggagacctggtccacaagtcccatatgcagtct
atcattgacaagctgcagtccccagagtccttcgccaaaagtgtccaggagctgaccatc
gttctgcagaggaccggtgaccccgccaacctcaccaacctcagaccccacctggagctc
ctggccaacatagaccacaacccagatgctcccactcccccctgggacgagctggaaaga
gtgatgctcgctgtgaagctggtggtccacggtctggtagaattcatccagaacttcagc
aaaaagagccacgacactccacagcctcagcccaacagcaagtacaagaccagcatgtgt
cgggacctccgtcagcaggggggctgtcctcgggggagcaactgtacgtttgcacacacg
caggacgagctggagaaattccggctgaggaacaagaagagcagcgccgcaggccgtgtg
tttcctctggcgccggggattatgggtaaaaccttcgctctggaggcggggctgcacaca
gatgctcccgcaggtgtggcacagggactcaaaggcgacaccacgacggttctggtggag
ggtgtggcgggcgggacgcaccacaagctgatctccagaggcgccgacgcgatggaagac
ctgaagagggcggcgccgaatggatccagcggagccaacgggtccaacgggctgacgggc
agcgcctcgaccgagcagaagtgcgcctcccctcccaggatccctgtcagccactcctcc
tccatgtcgcccgcggcaacagccggttggggcgacagcggcgcccccggcgcgttcctg
ctgcgaacgccgcatctgtcccaggcagcggacgcgtactaccaggagccccacccggtg
ccggagccggcccatttccagagcagctgtgagtgttcctactacgcgtcggctcttcac
ccccctcacaaaacctgcatggctcagttcctccgctcctccaacgtcccggaatcctct
ctgccgccctccgccggcccgccatcccctttcgacccccacccgccgcacccgcacgcg
tcctcctcctcgggctacccgcccagagaccggatgggcccccccagcttccacgcccac
ccggggcagcctcagtacggccctgtggtggcggcccacggcgtttacgcccccctctac
gacagcaggagagtgtggcgccctcagctgtaccacagagaggacgccaggagcaactcg
ctgccgctggaggtgctgcactcctccgtctaccagccccccctcagggagcgcttcaac
tccctggacagcaacttctgcgctggagcggaacgccgcctgcacagggactgcggccac
gtccggctgggatacgacgatctgttcaggaggaagcaggagcagtgggctcatcatcac
caccaccaccaccaccacaacgccagcaggccctcgccgtcctcccccatcttcaccatc
gattttggacccgagcacgcggagagcggcggcggccagtgcgcagcgtgccggttccgg
ggcgaggagaacctagcgcgctactctccgtggtcctgcggcgccatcgggccctgcctc
agcccgttcgacccccacaagccggccccctcctgcgccgagcacccggagctggacggt
agcaccgcgggcggcggcgagaagcgatggctgcactcgatggatcactaccgacgcctg
aaggacgaggaccccatcattcccttcagcgaggcgcccatcatctccaagtggggcgcc
atctccagggcggcccgggccgggtaccacaccgcggaccccatctgccagggcgccgcc
gccaccgccgccgccatcaaccttaaagattccagccctcacctggaccacaggtggagc
tccagaggctccgactccttccagccactccagtttcctggagagtga
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