Takifugu rubripes (torafugu): 101068919
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Entry
101068919 CDS
T02386
Name
(RefSeq) homeobox protein SIX5-like isoform X1
KO
K19474
homeobox protein SIX5
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101068919
Transcription factors [BR:
tru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
101068919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101068919
NCBI-ProteinID:
XP_003968472
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Position
11:9125766..9131174
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AA seq
901 aa
AA seq
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MASLSLESTEQSKNSPEEPAGTDCKKEKDPLEISKQLLQSFQKSALTFSTDQISCLCEAL
LQAGNVERLWRFLSTIPLSSELLRGNETLLKAQALVAFHREEFKDLYAILESYAFHPSNH
GFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNALK
ECYKRNRYPTPDEKKNLTKVTGLSLTQVSNWFKNRRQRDRTPSGTHSKSESDGNHSTEDE
ASPMDDVPDKAEGPAGLSAPIISLTTGAGGQLILNESGNLLAGAQSLLLNGNSLISNAGA
GVIINGLSMADCQTVTLNPVATNSPLILNGAQVITKPSINAQPHAVPAGEGASMEDKSSR
LPAVVLSTDPTPASAASSKAESSVEMEFIRVPDSESSSQTISSSSLSLSPPSPALASPLA
LPRSAGVVMSTSSVSFASQPVEYVVFATAGSQLNHSSSVVTSATSIPQVFSLPQVVPSIQ
GVPVSQPVQQPSGAQLSQCPQLVPVAPLTSTASQFQNQTLNIIKKPVQQQQNAPPSLPTG
TTTIVSVSQLGNIQLPQQRDPTSVSARSKIQVPQVISISPPTQVVPAPQPKAAVSPQIVP
VSMPQLVPVSPLQTSSSISFPQVVPAGPSLSIPSAGVPLQILTSAPAARPAAPAPLKINQ
LRPHQSVGSPSGVAPGVQLLNSGIIQLPSTPPGNLLLSGSPYLSVQQGKLILTIPAGIQL
TSLPLKPAPEAPPASNGASLALTPSAPVVTSCPSGLASPPLNFISQSPPYGTPETGAIPS
PHTLDHSVGPATPTALTPESMLTLSPMYSGVTSNTQSPQPVWSPLPLSSSAGLTLFDVRG
KADLPVDPGLLGLPGGESLLLGSPSPEQDTSSALDNPEEMDGDAKILTQLQSVPVDDELG
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggagtctacggaacaatccaaaaacagcccagaggagccagcg
ggaacggactgcaaaaaggagaaggatccgctcgaaatttcgaaacagctgcttcaaagt
ttccaaaagtcggctctgactttctccactgaccaaatatcatgtctgtgcgaggccctc
ctgcaggcgggcaatgtggagcgcctgtggagatttctctccaccatacctctgtcgtcc
gagctgctacgtggcaacgagaccctgctgaaggcccaggctctggtggctttccaccgg
gaggaattcaaagacttgtacgccatcctggagagctacgcgtttcacccgtctaaccat
gggttcctgcaggacctttacctgaaagcccgctacaaggaggcggagaggtcgcggggc
cgcagcttaggcgcagtggacaagtaccggctccggaagaagttccccttacccaagacc
atctgggacggggaggagaccgtgtactgcttcaaggagaagtcccggaacgcactgaag
gagtgttacaagagaaacaggtaccccactcccgacgagaagaaaaacctgaccaaagtc
accggactgtccctcactcaggtcagcaactggttcaagaaccgcaggcagagggaccga
actccgtccggaacccacagcaaaagcgagtctgatgggaaccacagcaccgaggacgag
gccagccccatggacgacgtccccgacaaagcggaggggcccgccgggctgagcgcgccc
atcatctcgctgaccacgggggccggcggtcagctcatcctcaacgagtccgggaatctt
ctcgccggcgcccagtccctgctcctcaacggaaactccctcatctccaacgcgggcgcc
ggcgtcatcatcaacgggctcagcatggcggactgccagacggtcacgctgaatccggtg
gcgaccaactcgcctttgatactgaacggcgctcaggtgatcaccaaacctagcatcaac
gcgcagccgcatgcggttcccgcgggagagggagcgtccatggaggacaagtccagtcgt
cttccggcggtggttctgagcaccgaccccacgccggcgtccgccgcttcgtctaaggcg
gagagtagcgtggagatggagttcatccgcgtccccgattctgaaagcagcagccagacg
atatcgtcctcttccttgtctctgtcccccccgtcgccggctctggcctccccgctcgct
ctcccccgctctgccggcgtggtgatgtccacgtcttccgtgtccttcgccagtcagccg
gttgagtacgtcgtcttcgccaccgccggctcccagttaaaccatagtagctctgtggtc
acctccgccacctccatccctcaggtcttttccctcccccaggttgtcccttccattcag
ggggtgccagtatcccaaccggtccagcagccttcaggagcccagctgtcccagtgtccc
cagttggtcccagtagcccccctcacctccacagcttctcagttccagaatcagacattg
aacataattaaaaaaccggtgcagcagcagcagaatgctccccccagtctgcccacgggc
accaccaccatcgtctctgtctcccagctgggtaatattcaactcccccagcagagggat
ccgaccagcgtgtccgcccgtagcaaaatccaggtcccgcaggttatttcgatctccccc
ccgacgcaagtcgtcccagcaccccaacccaaagccgccgtgtccccgcagattgtcccc
gtctccatgccgcagctggtgcccgtctcccctcttcagacttcttcaagcatctctttc
ccgcaggtcgtccccgccggcccgtctctgtccatcccgtccgccggggtgcctctgcag
atcctgacgtcggctccggcggcgcgaccggctgcgccggcccctctgaagataaaccag
ctcaggccccatcagagcgtgggctcgccgagcggcgtggcccctggggtgcagctcctg
aactctgggatcatccagctgccctccactcctccaggtaaccttctcctcagcgggagc
ccctacctgagcgtccagcaggggaagctgatcttgaccatcccggcaggtattcagctc
accagtctgcccctgaaacccgcccccgaggctccgcccgcctctaacggagcgagtctg
gctctcaccccgtccgcccccgtcgtgacctcttgcccgagcggcctcgcgtcgcctcca
ctgaacttcatcagtcagtctcccccctacggcaccccagagaccggcgccatcccgtcc
ccccacacgctggaccattccgtgggtcctgccacgcccactgcgctgaccccggagagc
atgctcaccctcagtcccatgtacagcggcgtgacctccaacacccagtcgccgcagccg
gtctggagccccctgccgctctcctcttcggccggtctgactttgtttgacgtccggggg
aaggcggacctgcccgtggaccctggtttgttgggcctgcctgggggggagtcgctgctg
ctggggagcccctcgccggagcaggacaccagctccgctttagacaacccagaggagatg
gacggggacgccaagattctcactcagctccagtccgtccctgtggacgacgagctgggc
ttgtag
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