Takifugu rubripes (torafugu): 101069053
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Entry
101069053 CDS
T02386
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X2
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101069053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101069053
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101069053
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101069053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
TRIM_CC
zf-C3HC4_4
zf-C3HC4
PRY
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
Fn3_Dep-1_3rd
NDNF
PAPA-1
Motif
Other DBs
NCBI-GeneID:
101069053
NCBI-ProteinID:
XP_003966501
UniProt:
A0A674N8F2
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All DBs
Position
8:3462734..3511472
Genome browser
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPLPHSGPNSPGEEGSNRLAL
VPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVTALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDVLIDIIQRRRELI
GSKIKEGKSQRIRKLAQQIANCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFGREKKLLENLDYLTAPNAPSIREELCTASYDTIA
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLDSWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPATLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSCPKHEWIGKNSASWVLCRC
NNSWAVRHNSKEFAIEPLPHLRRVGVLLDYDAGCVTFYDAVGSQHLHTFHVSFAQPICPV
FNVWNRCLTILTGLPIPDHLEGLDPQD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgtccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgctcacagcctgtgctttggctgcgcccaccgcattctcatctcc
cactgcgccaccaacgaatccgttcagagcattggtgccttccagtgccctacctgtaga
tatgtcatttccctgagtcctgagcgtggacttgagggccttaagagaaacgtgaccttg
cagaacattattgaccgagtgcaacgggcctcatcttcggccggactgcctctacctctg
cctttgccccacagcgggcccaactctcccggtgaagaagggagtaatcgactggcatta
gtacctgtcagtgccgccatgtccagcccaggtacgccacccgaaccggtccagtgccag
ttctgcgagcaggaccctcctcaggacgcggtaaaaacctgcgtgacctgcgaggtgtcg
tactgcgaggagtgcctcagggccactcacccaaacaagaagccgttcaccggacaccgc
ctgatcgagcccatgccggactcgcacctcagagggctgcagtgtctcgagcacgaggaa
gagaaggtcaacatgtactgcgtcacagacgatcagctgatctgctcgctgtgcaaatta
gtcggacggcacagggaccaccaggtgacagcactgagcgaccgctatgaaaagctcaag
caagccctggactccaacctgagcaatttgatcaaacgcaacaacgagctggagtcgctg
atggggaaactaatccagacatgtcaacacgttgaggtgaatgcgtcccgtcaggagggt
aagctcatggaggagtgcgacgtcctcattgacatcattcagaggaggagggagctcatc
ggcagcaagatcaaggaagggaagtcacagcgtattcggaagctcgcacagcaaatagcc
aactgcaagcagtgcatcgagaggtcgtcggccctcatcacgcaggccgaccagaccctg
aaagagactgatcacgcccgcttcctgcagactgccaagagcatcaacgagagggtttcc
atggcaactgcatcaacccaagtactgatccctgagattcacctgacagacacttttgat
acgtttgccctggactttggcagagagaagaagttgttggaaaacctggattatctcact
gctcccaacgctccgtccataagggaggagctgtgcacggcatcttacgacaccatcgct
gtccactggacatcggacgatgaattcacagtggtgtcatacgaactccagtacgcaatc
ttcaccggacagtccaacatcgccagtctgtgtaactcgttggacagctggatgattgtt
cccaacatcaagcagaaccactacaccgtgcatggtctgcagagcggcaccaagtacatc
tttgttgtcaaggccatcaaccaagcaggaagcagaagcagcgaacctgcaactctgaag
accaacagtcaaccctttaaactggatccaaaatctgcgcacaagaaattgaaggtgtca
catgacaacctgacagtggagcgggatgagaccacttccaaaaaaggccacagccaggag
cgtttcagcagccagagcagctatggagtggttggaaatgtctacattgacagtggtcgg
cactactgggaggctttgattggcgggagcacatggtacgctgtgggcatagcctacaaa
tcatgccccaagcatgagtggatcggcaaaaactcggcctcctgggtgctgtgccgctgc
aacaactcctgggcagtgcgccacaacagcaaagagtttgctatcgagcccttgccccac
ttgcgacgcgtcggggttctgctggactatgacgccggctgcgtcactttctacgatgca
gtgggttcccagcacctgcacacattccacgtgtcctttgctcaacctatctgccctgtg
ttcaatgtgtggaacaggtgtctgacaatcctcactggccttcctatccctgaccatcta
gaaggactggacccccaagactag
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