Takifugu rubripes (torafugu): 101069457
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Entry
101069457 CDS
T02386
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru02010
ABC transporters
tru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101069457
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101069457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tru02000
]
101069457
Transporters [BR:
tru02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101069457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
101069457
NCBI-ProteinID:
XP_011611367
Ensembl:
ENSTRUG00000015743
LinkDB
All DBs
Position
17:15009673..15033727
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRTYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGMVGNFNDSIISRLLIDAKKILLYTQNDR
SYEGYSKLLRALRKMQKNTAHFKLKDFLKDDETLSHFLHRNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNATPLEEFVHIADRNVSRLTQEIICKSSSDWLNKAQSHFLSNLDF
FKPIRDVRSDPKVVQEVSAATNYLLENLGALAVEFSSIKSWKDMRREIMFLTANATGSPN
QMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSETRSTYDNSSTPYCN
NLMKNMESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRELGGMW
DEVKPRILNFIENSEEMDLVRTMLQNNASAAFLNSQLSGTEWRVSDISLFLSKAAKDPRR
PGSPYTWRDVFNETDHAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQRFWAGIV
FPDIEPSNSTELPAKVNYKIRMDIDNVERTNKIKDSYWDPGPRADPFEDLRYIWGGFSYL
QDIIEHGIIRAVTGTTEKIGVYLQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLNNGILWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDPG
VVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
IVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLYG
VMTWYIEAVFPGQYGIPRAWYFPFTRTYWCGEKENQNLSSSLSKGNAEVCIEEEPAHIEP
GVYIENLVKVYSNGNKLAVDGLSLKFYNGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQIVN
DVGLPHKRQSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RQGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDYDLT
LQSCRNSASTVSYSKKAEKEDSVSESSSDAGLGSEPDSETTTIDVSLISNVIFKHVSEAR
LVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAEDS
GVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPDSRETDWLGGTDGK
GSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKY
PSLVLDPTMYGEQFAFISNDQPENHHINKLQAALTEKPGFGTRCMDGGPSLDAPCAPAES
DWNVPDVSQSVTELFERGNWSVENPSPLCECSCGGRKRMLPECPPGAGGLPPPQMKINDN
ITLQNLTGRNISDYLVKTYAKIIGKSLKNKIWVNEFRYGGFSLGARQSQLMAHADEMDEA
IAALRQRFHLERGTAGDRFFHSLSNFIQGMDTKNIVKIWFNNKGWHSIGSFLNVMNNGIL
RANLQAGKDPKTFGINAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVV
FLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIVIFVCFQQEAYVSSTN
LPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSN
EIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLF
AMAIEGVIFFSITVLIQYHFFFKARSSTSHLKPIGEEDEDVARERQRILSGGGQSDILEL
RQLTKIYKRKQKPAVDRLCVGIPRGECFGLLGVNGAGKTSTFKMLTGDSMVTGGEAYLAS
KSVTKEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLGL
MKYVDKAAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKEG
RSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRP
VMGFIERELPGSTLKEKHRNMLQYQLPTSLTSLARIFSLLSKNKEALSIEDYSVSQTTLD
QVFVNFAKDQSDEDHFKEVNLNKRDAVVVDLSQLNPFLTDNSTRESCV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagctgggtctgctgctttggaagaacttcacctaccggcgaaga
cagaccatccagctgctcattgaaatcatctggccccttttcatcttcttcatcctgatc
tcagtccgaacctactacccaccttatgagcagcatgaatgtcacttccccaacaaggcc
atgccctctgcgggcacgttgccctgggtgcaaggcatcatctgcaacgctaacaacccc
tgtttccgcaatcccaccccaggcgagagtcccgggatggtggggaacttcaacgattca
atcatctcccgcctgctgatcgatgccaagaagatcctgctgtacacgcagaacgatcga
agctacgagggctacagcaaactgttgagagcactcaggaagatgcagaagaacacagct
catttcaagctgaaggactttttgaaggacgacgagaccctctcgcacttcctgcaccgc
aacgcctcgctgccccaccacgcgctgaagcagatcgtggaggccgacgtcaacctggag
aaggtcctgaccaaaggcttcggcttccatctcagagacctctgcaacgcgacgccgctg
gaggagttcgttcacattgctgaccgcaacgtgtctcgcctgacccaagaaattatatgc
aagtcctccagtgactggctaaataaggcgcaaagccactttctgtccaaccttgacttc
ttcaaaccgatccgggacgtgagatcagaccccaaagtggttcaggaagtctcagctgcc
accaactatcttctagagaaccttggggctctggctgtggagttttccagcatcaagagt
tggaaggatatgcgcagggagatcatgttcctgactgccaatgccacaggctctccaaac
cagatgtaccaggccgtttcccgtattgtttgcgggcatcctgaagggggcggcttgaaa
atcaagtcactcaactggtatgaggacaacaactacaaggccttgtttggaaatcatggc
aacgacagtgacagtgagacccggtcgacctacgacaactcctcaaccccctactgcaac
aacctgatgaagaacatggagtccagccccatttccaggatgatctggagggcgctgaag
cctctgctcatggggaagatcctttataccccagacactccagcgacccagcgaataatc
cacgaggttaataagaccttccaggaacttggcgtcttaagggaactcggcggcatgtgg
gacgaggtgaaaccccgcattttaaacttcatcgagaacagcgaggaaatggatttggtt
cggaccatgctgcagaacaacgccagcgccgctttcttgaattctcagctcagtgggacc
gagtggcgtgtgtcggatatatcgctgttcctgtccaaggccgcaaaggacccccggcgg
cctggttccccttacacctggagagacgtcttcaacgagaccgatcatgccatacagacc
atctcccgcttcatggagtgcgtgaacctcgacaaactggagccggtagcaaatgaagag
aggctggtcaataagtccatggggcttctggacaaccagagattctgggccggaatcgtg
tttcccgatatcgagccgagcaacagcaccgagctgcctgccaaagtcaactacaagatc
cgtatggacatcgataatgtggagaggacgaacaagattaaagatagctattgggaccct
ggtcccagggcagatccctttgaggacctccggtatatatggggcggattttcctacctg
caggacatcatcgagcatggaattattcgagctgtcaccggcaccacggagaagatcggc
gtgtaccttcagcagatgccctacccgtgctacgtggatgacattttcctgcgcgtgatg
agcagatcgatgcctctcttcatgaccttggcgtggatgtactcggtagccatcatcatc
aagggcgtggtgtacgagaaggaagcccggctgaaggagacgatgaggatcatgggactg
aacaatggaatcctgtggctcagctggttcatcagcagtttaatcccgctcttgatcagc
gccggcctgctggtgatgctcctgaagatgggaaacctgctgccctacagcgatccggga
gtggtgtttctgttcctgggctcctttggtgtcgtgaccatcatgcagtgcttcctcatc
agcacgctgttctctcgggccaacttggcagctgcctgcggtgggatcatatacttcacc
ctctacctgccctatgtgctgtgtgtcgcctggcaagactacgtgggcttcggagccaaa
atcgtagtgagtcttctctcccctgtggcttttgggttcggttgtgaatactttgccttg
tttgaggagcaaggcgtgggcatccagtggtccaacctactggccagccctctggaggaa
gacagctacaacctgaccacctccatctgcctcatgctgtttgacgccgtgctctatggc
gtgatgacctggtacatcgaagccgtcttccctggtcagtacggaatcccacgggcttgg
tatttccctttcacaagaacctactggtgcggagaaaaggagaaccagaatctttcttca
tccttgtcaaagggcaatgctgaagtgtgcatcgaggaggagccagctcacatcgagccc
ggtgtctacatcgaaaacctggtaaaggtttacagcaatggaaacaagctggctgttgac
ggactgtccctgaagttctataatggacagataacctccttcctcggccacaatggagcc
ggcaagaccacgaccatgtccatcttgacgggcctgtttccaccgacctctggcacggcc
tacatcctcggcaaagacatccgtaccgaactgagcaccattcggcagaacctcggcgtg
tgtccccagcacaacgttctttttagcatgctgacggtggaggagcacatttggttctac
gcccgtctgaagggcctgccggaggagaaggtgaaggcagagatggagcaaatcgtcaac
gacgtcggtctgcctcacaaacgacagtcccgcaccagcacactgtcgggagggatgcag
aggaagctctctgtggctctggcttttgtgggaggctccaaagtcgtcatcctggacgaa
ccaactgctggtgttgatccttacgcccgcaggggaatctgggacctgctgctgaaatac
agacaaggccgcaccatcctgctctccacgcaccacatggatgaggccgacatcctcggc
gaccgcatcgccatcatttcccacggcaagctgtgctgcgtcggctcctcgctcttcctg
aagacccaactggggacgggctactacctgaccctggtcaaaagagattacgacttgacc
cttcagtcctgcaggaactccgccagtaccgtctcgtacagcaagaaggcagaaaaggag
gacagcgtgtcagagagcagttcagatgccggtcttggcagcgaacccgatagtgaaacc
accacaatcgatgtgtccctcatctccaatgtgattttcaagcacgtctcggaagctcgc
ctggtcgaggacctcggtcacgagctcacctatgtcttgccgtaccagtcagctaaagac
ggagccttcgttgagctcttccacgaactagatgaccggctcaccgatctgggcatttcc
agctatggaatatctgacaccacactagaagagattttcctgaaggtggccgaggacagt
ggagtggattctgttgagctctcagatggagttgtgcccaccaggactcgccgtcgtcat
gctttcggagaccaccagagctgcctgaagcccttcaccgaggatgactttgatttcaac
gactctgaaggtgacccagactcccgggagaccgactggctcggcggaacagacggcaaa
ggttcctaccaggttaaaggctggagtctgaagagacagcagttcgtggcactactgtgg
aagcggttcctctacgctcgtcgatccaggaaaggcttctttgctcagattgttctgccg
gctgtgtttgtctgcattgctctggtgttcagcctgatcgttcctcccttcgggaagtac
ccaagtctggttctggatcccaccatgtatggagaacagttcgccttcatcagtaatgac
caacctgaaaaccatcacatcaacaagttacaagcagctctcacagaaaaaccaggattt
ggaactcgatgcatggatggaggaccttcactggacgcgccgtgtgcaccagctgagtca
gattggaacgtcccagatgtctcccaaagtgtgacagagctatttgagagaggcaactgg
tcggtggagaacccgtctccgctttgtgagtgcagctgtggcggccgaaagaggatgctt
ccagagtgtcctcccggtgctggtggacttccgccacctcagatgaagatcaatgacaac
atcaccctgcagaacctgactggcaggaacatttcagactaccttgtgaaaacatatgca
aagattatcggcaagagcctgaagaacaagatctgggtcaacgagtttagatacggtgga
ttttcattgggagccagacaatctcagctgatggcgcacgcagatgaaatggatgaggcg
attgctgcgctgaggcaacgcttccatctggaaagaggaactgcaggcgatcgattcttc
cacagtctctctaattttatccaaggaatggataccaagaatatcgtcaagatttggttc
aacaacaaaggctggcacagtatcggctctttcctcaacgtgatgaacaacgggatcctg
cgggcaaacctgcaagctggcaaagaccccaaaacgttcggcatcaatgcatacaatcac
ccgcttaacctcaccaaggagcagctgtcgcaggtggcgctgatgacaacatcggtcgac
gtgctggtttccatctgcgtgatcttcgccatgtccttcgtgccagcgagttttgtcgtc
ttcctcatccaggagagagtgaacaaagccaaacacatgcagttcatcagcggagtgcag
ccgttcctctactggctggccaactttgtttgggacatgtgcaactacattgttccggct
acgctggtcatcgtcatctttgtgtgtttccaacaagaggcctacgtctcctccacgaac
ctgcccgtcctggctctgctgctgctgctctacgggtggtccatcacccctctgatgtac
ccagcctcgttcttctttaagatccccagcacagcctacgtggttctaaccagcgtgaac
atactgatcggaatcaacggcagcgtctctacgttcgtgctggagctgtttggaagcaat
gagattggcggcatcaacgacatcctgaagaacgtgttcctcatcttcccgcatttctgt
ctgggcagagggttgattgacatggtgaagaatcaggcgatggccgacgccttggaaaga
tttggtgaaaaccgcttccgatcacctctggcctgggacatggtgggaaagaacctgttt
gcgatggccatagagggcgtgatcttcttcagcattactgttcttattcagtaccacttc
ttcttcaaggccaggtcatcgacaagccatctaaaacctatcggagaagaagacgaggac
gtggctagagagcggcagaggatcctgagcggcggtgggcagtcggacatcttggagctc
cgacagctaaccaagatttacaagcgcaagcagaagccggccgtggacaggctgtgtgtt
ggcatcccacgtggcgagtgttttggtttgctgggggtaaacggggcaggtaaaaccagc
acttttaaaatgctgactggtgactcgatggtgaccggtggagaggcctatctggccagc
aaaagtgtaacaaaagagatcgatgaggtgcaccagaatatgggatactgcccccagttc
gacgccataaacgacctgctgacgggcagagaacacctcgagttctacgccatcttgaga
ggagtcccagagaaagaagtctgtgaggtggcagactggggcatccgaaagctgggctta
atgaaatatgtggacaaggcagcgggcagctacagtggagggaacatgaggaaactgtct
acagccatcgctttgataggaggaccgcctgtcgtctttttggatgaaccgacaacaggc
atggaccctaaagcgcggcgtgccctgtggaacgccatcctgagcatcattaaagaggga
cgatctgtcgtcctaacatctcacagcatggaggaatgcgaagcgctctgcaccagaatg
gccatcatggtcaacggcaggttccgctgcctgggcagcgtgcaacacctcaaaaacagg
tttggcgatggctacaccatcatcctgcgggtggccggaccagatccagatctccgaccg
gtgatgggattcattgagcgggagctgcccggcagcacgctgaaggagaagcaccgcaac
atgctgcagtaccagctgcccacctccctcacctctcttgcacgcatcttctccctgctc
tctaagaacaaggaggccctcagcatcgaggactactccgtttcccagacaactctggac
caagtgtttgtaaatttcgccaaggaccaaagcgatgaagaccatttcaaagaagtgaat
ctgaacaagcgggacgctgtcgttgtggatctctcacagctgaaccctttcctcacggac
aatagcaccagggagagctgcgtctga
DBGET
integrated database retrieval system
