Takifugu rubripes (torafugu): 101069555
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Entry
101069555 CDS
T02386
Symbol
npc1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tru04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
101069555 (npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101069555 (npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tru02000
]
101069555 (npc1)
Transporters [BR:
tru02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
101069555 (npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
101069555
NCBI-ProteinID:
XP_003975414
Ensembl:
ENSTRUG00000012253
UniProt:
H2U260
LinkDB
All DBs
Position
22:complement(2951390..2963888)
Genome browser
AA seq
1273 aa
AA seq
DB search
MKLMGLLPGTAPPCILVVIILLSEGCFQRVGAQHCVWYGECGESEKVPGKKYNCNYTGPP
KPLLPEGYELLTELCPGYDYENRSLCCDVNQLHTLKGSLQLPLQFLSRCPACFFNLMNLF
CELTCSPHQSQFMNGTKFSGPNVVEVQYYIGQTFANAMYNACRDVQAPSSNVKALSLLCG
KDAKDCNATNWIQYMFDTNNGQAPFPITAIFSDVPVSGYTPMNNKTYACTEGLEDGSGPC
SCQDCTDACGPTPVPPPPPLPWKILGIDAMTIIMWLSYMAFLFIFAGSLLVAWCHRKQTI
KSEYEPILDSNNPLSLNRDNQEQVDASCCETLGERFENFLRTCFSVWGSFCVLHPFIVLL
GSIVLVAASSGGLVYMQITTDPVDLWSSPKSQARQEKDYFDSHFGPFFRTAQLIITSPLN
DTFIYTPYFGGSDVPFKAILSKDILDQVLDLQLDIENLVATYEGQNVTLKDICLAPLSPY
NDNCTILSVLNYFQNSHSVLNHSRGDEFYVYADYHSHFLYCVSAPASLNDTTLLHDPCLG
TFGGPVFPWLALGGYDDTNYNNATALVVTFPLNNNYDPARLGKTLAWEKEFIRFMKDYKN
PNLTISFSAERSIEDEINRESNSDISTIVVSYVIMFVYISLALGHIQSFRRLLVDSKISL
GISGILIVLSSVSSSLGIFSYIGIPLTLIVIEVIPFLVLAVGVDNIFILVQTLQRDERMP
QEEIHHQIGRILGDVAPSMFLSSFSETVAFFLGALSNMPAVRTFSLFAGLAVFIDFLLQI
SCFVSLLGLDASRQEGNRMDIVCCVKIQGEEVKKDSFLFLFFKKIYAPFILNDWVRPFVV
AVFVGMLSFSIAVMDKVEIGLDQKLSMPDDSYILDYFKNLSEYLHTGAPVYFVVEDGLNY
SSLEGQNAVCGGVGCNNNSLVQQVYTASLISNYTTVAYTPSSWLDDYFDWVKPQSTCCRY
YNGTGAFCNASVVNSSCVHCRPMTPSGKERPVGDDFMRFLPMFLSDNPNVKCGKGGHAAY
GTAVDLYPQNTGVGATYFMTYHTILKDSPDFIKALKMARNLANNITQSLGHKVFAYSVFY
VFYEQYLTIAYDTALNLSVSLASIFVVTTVLLGFELWAAVTVSITIAMILVNMFGVMWLW
GISLNAVSLVNLVMSCGISVEFCSHIVRAFSISLMTSRVKRAEEALAHMGSSVFSGITLT
KFGGILILALSKSQIFQVFYFRMYLAIVLLGAAHGLIFLPVLLSYIGPSVNKAKVFAATK
RYAGTERERLLKY
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatggggctcctaccagggacagcacctccgtgcatactggttgtcatcatt
ctgctgtcagaggggtgttttcaaagggtgggggcccagcactgcgtttggtacggggag
tgtggcgagtcggaaaaggtgccaggaaaaaagtacaactgcaactacactggtcctccc
aaaccactgctacctgagggttacgaacttcttacggagctttgtcctggatatgactac
gaaaaccgaagcctctgctgtgatgttaaccagttgcatacgctcaaagggagtcttcag
ctgccccttcagttcctttctcggtgtcctgcctgcttcttcaacctgatgaacctcttt
tgtgagctgacctgcagcccccaccagagtcagttcatgaacggtaccaaattcagtggg
cccaacgtagtagaagtgcagtactatattggacaaacctttgctaatgccatgtataac
gcctgcagggatgtccaagcaccctccagcaacgtgaaagccttgtcactgctttgtgga
aaagatgcaaaggactgcaatgctactaactggatccagtatatgtttgacaccaacaat
ggacaagcccccttcccaataactgcaatattctcagatgtgccagtgtctggttacact
cccatgaacaacaagacgtatgcctgcactgagggcctggaggatggttctggtccctgt
tcctgtcaggattgcacagatgcctgtggccccacacccgtacctccccctcctcctctc
ccctggaaaatcctaggtatcgacgccatgacgatcatcatgtggctctcctacatggcc
ttcctcttcatttttgccggatcattgctggtagcttggtgtcacaggaaacagaccatt
aagtctgagtacgagcctatattggacagcaataacccactgtctctcaaccgtgataac
caagagcaagtcgatgcttcgtgctgtgaaacactgggtgaacgctttgagaactttctg
cggacctgcttcagcgtctggggttccttctgtgtgctgcatcccttcattgtgttgctg
ggcagcattgtactggtggccgcctcctctgggggactggtttatatgcagattaccaca
gaccccgttgacctgtggtcgtctccgaagagccaggctcgccaggagaaggactatttc
gacagccacttcgggcccttctttagaaccgcacagctcatcatcacctccccgctgaat
gacactttcatctacaccccatactttggagggtcagacgtcccatttaaagccatcctg
agcaaagatatcctggaccaggtgctggatctgcagcttgacatcgaaaaccttgtagcc
acatacgagggccaaaacgtgacacttaaggatatttgcttagcgccactctcaccttac
aatgacaactgtaccatcctgagtgtcctcaactacttccagaacagccactctgtgctg
aaccacagcagaggagatgaattctacgtctacgctgactatcacagtcacttcctctac
tgcgtcagcgcaccagcctccctcaatgacaccactcttctccatgacccctgtttaggc
acctttggtggtcctgtctttccttggctggccttgggtggttatgatgacacaaactac
aacaacgccacagctctggtggtcacctttccactcaacaacaactatgatccagccagg
ctgggaaaaactctggcatgggagaaagaattcatcaggtttatgaaggactacaaaaac
cccaacctgactatatcctttagtgccgagaggagtattgaagatgaaataaaccgagag
agcaacagtgacatcagcactatagttgttagctatgttattatgtttgtgtacatctcc
cttgccctgggccacattcagagcttcaggagactgctggtggactccaagatttccctg
ggtatttcgggtatcctgatcgtgctcagttctgtgtcctcctcactgggcattttcagc
tatattggtatcccgctcacccttattgtgattgaagtcatccctttcctggttctggct
gttggagtggacaacatctttatattagtgcaaacacttcagagggacgagcgcatgcct
caggaggagatccaccatcagattggccgtattctcggagatgtagccccaagcatgttc
ctctcctccttctcagagacggtggcttttttcctgggagctctgtccaacatgcccgca
gtgaggactttctctctgtttgctggcttggctgtttttatcgatttcctgttgcagatc
agctgcttcgtcagcttgctcggccttgatgccagccggcaggagggaaatcgaatggac
attgtttgctgtgtaaagatacaaggagaggaagtaaagaaggatagcttcctcttcctc
tttttcaagaagatctatgccccgtttattcttaacgactgggttcgaccgtttgtggtg
gccgtgtttgtgggaatgctctccttcagtattgccgtaatggataaagtggagattgga
ctggatcagaaactctccatgcctgatgactcgtacatactggattactttaagaacttg
tctgaatatctccatactggagcgcctgtgtactttgtggtcgaggatggtctcaactac
agcagtctggagggacagaatgctgtctgtggcggagtgggctgcaacaacaactctctg
gtccagcaggtctacactgcctcactcatcagcaactacacaactgttgcctacacgccc
tcctcttggcttgatgactactttgactgggtgaagcctcagtctacctgctgcagatac
tacaatggaactggggccttctgcaatgcgtcagtggtaaattcatcctgcgtgcactgc
cggcccatgacgcccagcgggaaggagcggccagttggagacgacttcatgcggtttctg
cccatgtttctgtcagacaatcccaacgtcaagtgtggaaaaggaggacacgcagcctac
ggcacagcagtcgacctgtatccccagaacacgggggtcggagccacgtacttcatgacc
taccacaccatcctgaaagactctccagacttcatcaaggctttaaaaatggcccgtaat
ctggccaacaacatcacgcagtcactgggccacaaagtctttgcctacagcgtgttttac
gtgttctacgagcagtacctcaccatcgcgtacgacacagctctgaacctgagcgtctcc
ttggcctctatattcgtggtgaccacggtgctgctgggcttcgagctgtgggccgccgtg
acggtcagcattaccatcgccatgatcctggtcaacatgttcggtgtcatgtggctgtgg
ggcatcagcctcaacgcggtgtccctggtgaacctggtcatgagctgtggcatctcggtg
gagttctgcagtcacattgtgcgagcgttttccatcagcctgatgaccagcagagtgaag
cgggctgaggaggccctggctcacatgggcagctctgtgttcagcggaatcaccttgacc
aagttcggaggtatcctcatcctggcgctttccaaatcgcagatcttccaggttttctac
tttaggatgtacttggccatcgtgttgctgggggctgctcacggactcatcttcctccct
gtactgctcagttacatcggtccttcagtaaacaaagctaaggtgtttgctgctaccaag
cgctacgccggcacagaaagggagcgcctcctcaagtattag
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