Takifugu rubripes (torafugu): 101069723
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Entry
101069723 CDS
T02386
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04382
Cornified envelope formation
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04518
Integrin signaling
tru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101069723 (col4a2)
04518 Integrin signaling
101069723 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101069723 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101069723 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101069723 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tru04147
]
101069723 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101069723 (col4a2)
Exosome [BR:
tru04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101069723 (col4a2)
Glycosaminoglycan binding proteins [BR:
tru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101069723 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101069723
NCBI-ProteinID:
XP_011606187
UniProt:
A0A674MN77
LinkDB
All DBs
Position
1:complement(17321874..17363479)
Genome browser
AA seq
1669 aa
AA seq
DB search
MNLTDYRFLLLCVFGAILAIQVHAGGKKHSGPCGGRDCSGGCKCFPEKGARGQPGPLGPQ
GDRGPPGQPGDPGIHGPKGQKGDRGRTGIFGPKGNVGLTGVPGFSGSNGIPGHPGQGGPR
GKPGADGCNGTNGEPGLDGIPGRNGRPGFSGQPGRKGEKGDTLEVRVYMERFRGDFGAPG
SNGILGPPGFPGLQGTRGTSGPKGPPGDPGPRGQKGTMVNVLKGVKGDQGDIGPAGPPGN
ATYPQNRGPVGTPILGYRGQKGLKGETGDRADNKGETGVMGFSGTRGPPGAEGSPGIRGD
LGETGPTGQGGIKGSRGEPGELISSGTSWPWSSVAGPEGPPGEQGPQGERGPVGDQGVTG
PPGLPASAAQHQVWDFMGPFGFKGEEGEKGPRGEPGLPALFAGPKGSTGRPGNPGTPGPK
GTWEDWYKGAAGARGRPGRPGSKGLKGDNGQCECAIVNAPPGLPGPAGEKGGAGMTGEFG
KKGDVGDPGPQGEDGSPGFPGVIGLSGPKGRKGEYSVAKQKGYQGDPGDPGLNREQGAAG
EPGSIGLPGFPGSPGSPGEATQGQHGDKGFQGLPGQPGAAGLRGEPGEDFRGVKGQRGLP
GDAGLPGYEGVAGTPGSPGGCSPTEGEGQVDVTGPCNAIPGRPGPLGYPGPLGLPGFIGP
SGEKGFKGQPGARGEKGEMGEQGIGDKPGPPGFPGPRGDRGLPGIHGSIGVPGFDGPPGR
QGFKGEKGAHGEVLGASPGPHGDQGLPGIRGSKGPSGDSGAQGYQGMDGMPGMIGFKGQH
GPLGLQGEQGRPGPPGIYGYPGDPGRAGPPGPLGAVGQPGFTGERGTEGEPGSPGPMGRK
GTPGAYGDDGPIGESGPPGDPGVPGAAGQPGLPGMKGYKGSPGMSGFEGMRGNTGPKGSS
GEQGEPGGLGEVGPKGISGHKGQKGDRGLMGPPGKKPHIPAQMIVDMKGTKGEPGPRGYE
GFTGPRGVKGLPGVPGREGFHGLPGDPSNEKGYRGDPGAQGLPGIKGMPGVSGKRGISGF
DGMPGPKGTKGSPGAYGASGEKGRKGIKGEKGPQIDFPGRAGFQGELGLPGDPGQKGLTG
EVGERGTPGFDGIQGKTGISGDPGTSGFAGVDGQKGNPGNQGQKGFLGIPGTDGHPGFPG
FPGNRGVPGLKGLYGLHGLKGQKGLQGPAGLEIVGPTGDPGTKGLKGDGGEPNNQRGVPG
SLGLKGFQGPLGDPGDPGPPGPRGLAGIDASPGGPGYIGDHGFVGPKGYEGFPGNRGHPG
ADGVLGYKGVQGNDGLPGVGGWKGLKGTQGTFGYRGPDGVPGKKGVKGEQGLMGVPGVTG
VQGQRGPTGPKGNSGATGFQGPPGNKGAAPLPPKLPGERGIQGPQGTPGPHGIKGPVGPQ
GFPGDAGFMGPRGQKGMPGINGRPGVPGFRGEVGRMGHAGLQGMEGNRGKPGVSGLPGMP
GRSVSVGYLLVKHSQADQVPMCPVGMAKLWSGYSLLYMEGQEKAHNQDLGLAGSCLPRFS
TMPFLYCNPGDICYYAGRNDKSYWLSTTAALPMMPVEDAAIKPYVSRCSVCEAPSVAIAV
HSQDITIPQCPAGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNGAR
GTCHYFANKHSFWLTSVDTSFHSEPAAETLKAGQLLSRISRCQVCMKNL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgactgactacaggtttttgcttctgtgcgtcttcggtgccatcctcgccata
caagtgcacgcaggtggaaagaagcacagtggcccatgtggaggaagagactgcagcggg
ggctgtaaatgcttcccagagaagggtgctaggggtcagccagggcctcttggccctcag
ggcgatcgagggcctccaggtcaaccaggtgatccaggtatccatggaccaaagggtcaa
aaaggtgaccggggccgcaccggcatctttggtccaaaaggaaacgtgggactgactggt
gttcctggcttttctgggagtaatggtattcctggccacccaggacaaggtgggccaagg
ggaaagccaggagctgacggctgtaacggaactaatggagaaccagggttagacgggata
cctggccgtaatggacgtcctggcttttctggccaaccaggaaggaagggggagaaagga
gacactctggaagtacgcgtttacatggagcgtttccggggagactttggagcaccggga
tcaaatggaatactggggcctccgggatttccaggattacagggtaccagaggaacctcg
gggccaaagggtccgccaggtgaccccggtcctcgaggacaaaagggcacgatggtgaac
gtgctcaagggtgtcaaaggagaccaaggagatatcggaccagcgggacctccaggaaac
gccacctatccacaaaatcgggggcccgtagggactccgattttgggatatcgaggacag
aaaggtctgaaaggagaaacaggagatcgggctgataataaaggggaaactggtgtgatg
ggattttctggaacgcgagggccacctggtgcagagggaagccccggcataaggggtgac
cttggtgaaacagggcccacaggtcaaggtggcataaagggcagcagaggtgaaccagga
gagctgatttcatcaggaaccagctggccctggtcttcagtggctggccctgaaggtcct
ccaggagagcagggtcctcagggcgaaaggggcccagttggagaccaaggtgtcacagga
cccccaggactcccagcctcagctgcacaacatcaagtttgggatttcatggggccattt
ggtttcaagggtgaggaaggagagaagggcccaagaggagaaccaggacttcctgctttg
tttgcaggacctaaaggcagcacagggcgcccaggcaacccgggaaccccaggacccaaa
ggaacatgggaagactggtacaagggtgctgctggtgctagaggaagacctggcaggccc
ggctctaaaggactaaaaggtgataatggtcaatgtgagtgtgccattgtgaatgctcca
cctggactccccggcccagctggagaaaagggtggtgctggtatgactggagaatttggt
aaaaagggtgatgtaggagatccaggtcctcaaggagaagatggatcccctggattccct
ggggtgattggtttgtcagggccaaaaggtcgaaaaggagaatactcagtagccaaacag
aaaggatatcagggagacccaggtgatcctggacttaatagggagcaaggagcagcaggg
gaacccggcagcatcgggctgcctggttttcctgggagtccaggttctccaggggaagcc
acccaaggacaacatggagataaaggttttcaaggtcttccagggcaacctggtgctgct
gggttaaggggagagccaggtgaagacttcagaggggtcaaaggtcagcgtggattacct
ggtgacgcgggcctcccagggtatgaaggagttgcaggaacacccggcagcccaggtggc
tgtagtccaacagaaggtgaaggacaggtggatgtaacagggccgtgcaatgctattcca
ggacgccctgggccactgggttatccaggacctcttggattgccaggctttataggtcct
tctggggaaaagggtttcaagggtcaacctggagcaagaggagagaaaggagaaatggga
gaacaaggcataggtgataaacctggaccaccaggttttcctggcccccgcggagaccga
gggcttcctggcatccatggttcaataggagtacctggatttgatggcccgcctggccgc
caggggtttaaaggagaaaagggtgctcatggagaggttttaggagcatctcccggacct
cacggagaccaggggctgcctggaattcgaggaagtaaaggcccaagtggggattctggg
gcccaaggctatcaaggaatggatggcatgcctggtatgattggctttaagggtcaacat
ggtcctttgggtctgcagggtgaacagggaaggcctgggccaccaggcatttatggctac
cctggtgatcctggaagagcgggtccccctggaccactcggtgctgtcggccagcccggt
ttcacaggagaaaggggaactgaaggggagcctgggtctccaggtccaatgggacgaaaa
ggtaccccaggggcatatggtgatgatggtcccattggagaatctgggccaccaggtgac
ccaggagtgcctggtgcagctggccaaccaggacttccaggaatgaagggatacaaaggg
tctcctggaatgtcaggttttgaggggatgaggggcaacacagggccaaaaggctccagt
ggggaacaaggagaacctggaggacttggagaagttggcccaaaaggcatatcaggccac
aaagggcagaaaggtgaccgtggtctgatgggtccacctggaaagaagccccacatccct
gcccagatgatcgtagacatgaagggaaccaaaggagaacctgggcctcgaggatatgaa
ggttttactggcccaagaggtgttaaaggtttgcctggtgtccccggccgagagggattt
cacggtctgcccggagaccccagcaatgaaaagggttacagaggagatccaggggcacaa
gggctgccgggaattaaaggcatgccaggagtatctggaaaaagaggaattagtggattt
gatggaatgccaggccccaagggaactaaaggaagccctggtgcttatggtgcttctggg
gaaaagggcaggaaaggaatcaaaggtgagaaaggcccacaaatagattttccaggaagg
gctgggttccaaggcgagctcggtttgccaggagatccaggtcaaaagggacttacaggg
gaagtaggagaaaggggtacacctggttttgatggaattcaaggaaaaacaggaatctcg
ggtgatccaggaacatcaggatttgcaggtgtagatgggcagaaaggaaatcctggtaac
caaggtcaaaagggttttcttggtattcctggaactgatggacatccaggctttcctggt
ttcccaggaaacagaggtgtccctggcttgaagggtctttatgggctgcacggattgaag
ggacagaagggtcttcaaggaccagcaggcctggagatcgtaggaccaacaggagatcca
gggaccaaagggctgaaaggagatggtggagaacccaacaatcagcgtggcgttcctgga
tcacttggtctaaagggcttccaaggacctcttggtgaccctggtgaccccggtccccca
ggaccccgtggtttagcaggaatagatgcttcccccggtggaccaggatacattggggat
catggatttgttggccccaaaggttacgaaggtttccctggaaacagaggacatcctggt
gcggatggtgtccttgggtataaaggtgtacaaggaaatgatggattacctggagttggt
ggttggaaaggtttgaaaggaactcaaggtacatttggatacaggggcccagacggtgtg
cctgggaagaaaggagtgaaaggagaacaagggttgatgggtgttccgggtgtgactggt
gtgcaggggcaacgaggtcccaccggtccaaaaggaaacagtggagctacaggatttcaa
ggacctccaggaaataagggggctgccccacttccccccaaattaccaggagaaagaggt
attcaagggccacagggtactccaggaccacatgggattaaagggccagtagggccacaa
ggcttccctggagatgcaggttttatgggacccaggggccagaagggcatgcctgggatt
aatggcagaccaggcgtgcctggattccgtggagaagttggacgaatgggccatgcaggt
ctgcaaggcatggaaggcaaccgtgggaagcctggtgtgtccggtctgcctggcatgccg
ggccgcagcgtcagcgtgggctacttgctggtgaaacacagccaggcagatcaggtcccc
atgtgtccagtgggcatggccaagctgtggagcggctacagtttgctgtacatggagggc
caagaaaaggcccacaaccaggatctgggactggcgggctcctgtctcccacgcttcagc
accatgcccttcctgtactgtaatcccggagacatttgttactatgccggcagaaacgat
aagtcgtactggttgtctacgacagctgctcttcccatgatgcccgtagaagacgctgcg
atcaaaccgtacgttagccgctgctcggtgtgcgaggctccatcggtcgccattgcggtg
cacagccaggacatcaccatcccgcagtgtcccgcgggctggcgcagcctgtggatcggt
tactctttcctcatgcacacagcagcagggaatgaaggtggagggcagtccttatcgtcg
cccggttcctgcctcgaggacttccgcacgacaccgtttatcgagtgtaacggggccaga
ggcacatgccactactttgctaacaagcacagcttctggctgacctctgtggatacgtct
ttccactcggagcctgcagcagagacgctcaaagcgggccagctcctgtcacgcatcagc
cgctgccaggtctgcatgaagaacctatga
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