Takifugu rubripes (torafugu): 101069729
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Entry
101069729 CDS
T02386
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101069729 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tru03400
]
101069729 (xpc)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101069729 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
101069729
NCBI-ProteinID:
XP_003963083
Ensembl:
ENSTRUG00000010735
UniProt:
A0A674MPI1
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Position
3:6325700..6332412
Genome browser
AA seq
930 aa
AA seq
DB search
MAKRSKCAVKKTDTKKLKRDLKGKQSGVNLQVKKENTGITEEEENLERKVKQKPRHSKNQ
ATVNKSSKTTKTTTNLETSKYFQSSLKEEERDSEEDFDRGKSAAPPGWVNNKKVEKEDEG
EEESEEDEDDWEEVEELMEPLGPVEPPEPVLPSQTLQIEIETPEVRKERKRKAEWETYVR
RMVNRYKKDLLVDIHKVHLMCLIASGMFRNRVCSEPDLLAITLSLLPTHFSMVAKERIDQ
NYLSGLLKWFRATFTLNPSLPCDQQTDPQALLERRLASLSARNHEEMTHLFLLVLRSLQL
LCRLIFSLQPIPLKLPPSKGKDAAGPSEKSNANQEKKGTDSKQSPGNKRPIKEGKSKADR
GRKKAKRTGEEREAEDKEEEKSTTLAGQRPKNSKRRSIASKVSYKEESSSGADEKLVSED
DFQAPSEEECIVDSESEEKSTKRAAGKRKSKSDWTKTNTAQKQQKSGGNLKQDSRELEEK
KEMEEGGGEGGTRTMRSGAKRRSGQKKGGPGDDEWLEVYLAKTSSWICVDVDHGIGKPHL
CSQNATSPVTYVVSVDGDGFVKDLGRKYDPTWMTLSRKRRVDEEWWEETLTPFMGPEDEK
DKKEEKELQNTLLNKPLPLSVAEYKNHPLYALKRHLLKYEAVYPSTAAVLGYCRGEAVYS
RDCVQTLHSKDTWLKEARTVRLGEEPYKMVKGFSNRSRKARMMSETKNENDLALFGEWQT
EEYQPPIAVDGKVPRNDYGNVYLFKPCMLPVGCAHLRLSNLHRVAKKLSIDAAPAVTGFD
FHGGYSHAVTDGYVVCEEFEEILRAAWVEEQELQKQKEKEKREKRVISNWTLLVKGLLIR
EKLKRRYSKKNQGLRILADGEEPGGLSSDEEAGEGASPAAKNASETLAMSWPQNRQEEED
KDCVSGLQKKKMTKREKKGQGKHLFPFEKP
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgaagtaagtgtgcagtgaaaaagaccgatacaaagaagctgaagagggat
ttaaagggaaagcaaagcggagtaaatctacaagtgaagaaagaaaatactggcatcact
gaagaagaggaaaacctggagaggaaggtgaaacagaagcctcgccactccaaaaatcaa
gcaacggtaaacaagtcatccaaaacaactaaaaccaccaccaatcttgaaaccagcaag
tactttcagtcctcactgaaggaggaagagcgtgacagcgaagaggactttgacaggggg
aagtcagctgcacctccaggttgggttaataacaagaaagtggagaaagaggatgaaggg
gaggaagagagtgaggaagatgaggatgactgggaggaagtggaagagttgatggagcct
ctgggtccagttgaacccccagaacctgtcctgccctcccagacccttcagatagaaatc
gagactccagaagtcaggaaagagcgaaaaagaaaggcagaatgggagacgtatgtgaga
cggatggtaaaccgatacaaaaaggacctgctggtcgacatacacaaggttcatctgatg
tgcctgatagctagcgggatgttccggaaccgtgtgtgcagtgaaccggacttgctggcc
atcactctgtcgctgcttcccacccatttcagcatggtcgctaaggaacgcatcgaccag
aactacctctccggactgctcaaatggtttagagcaacgttcactctcaaccccagtctt
ccttgtgaccagcagacggacccccaggctctcctggagaggcggctggctagtctatcg
gctagaaaccacgaggagatgactcatctcttcctgttggtcttgaggtccctgcagctt
ttgtgccgattgatcttttctttacaaccaattccactcaaactccctccatccaagggt
aaagatgctgccggcccctctgaaaagagcaacgctaaccaggagaaaaaagggacggac
tcaaagcaatcaccgggaaacaagagaccaatcaaagagggaaagtccaaagcagacaga
ggaaggaaaaaagcaaagagaacaggggaagagagagaggcagaggacaaggaagaggag
aaaagtacaactttagcagggcaaaggccgaaaaactcaaaacgccgcagcatcgcctca
aaagtgagctacaaagaggaaagcagcagtggagctgatgagaagctagtgagtgaagac
gactttcaggcgcccagcgaggaagagtgcattgtggattctgagagcgaggagaagtct
acgaagagggcagcgggaaaaaggaagagcaaatctgactggactaaaactaacactgct
cagaaacaacagaagagtggaggaaaccttaaacaggacagtcgggagttggaggaaaag
aaagaaatggaagaaggaggaggagaaggaggaacgaggaccatgaggagtggagcaaag
cgaagaagcgggcaaaagaagggggggccaggcgatgacgagtggctggaggtgtatctg
gctaaaacatcttcctggatctgtgtggatgtagaccacggcattggaaagcctcacctc
tgctcccagaatgcaacatcaccggtgacgtatgtggtgtctgtggatggagacgggttt
gtgaaggaccttggacgaaagtatgatcccacctggatgacactgtccaggaagagacgg
gtggatgaagaatggtgggaggaaacactcaccccattcatgggacctgaagatgagaaa
gacaaaaaggaggagaaagagctgcagaacacactgctgaacaagcctctgcccctctca
gtggctgagtacaagaaccacccgctgtacgctttaaagagacacctgctaaaatatgaa
gccgtctacccttcaaccgctgctgtcctcggatactgcagaggagaagccgtgtactcc
agggactgtgtgcagaccctccactccaaagatacgtggctgaaagaagctcgaactgtc
aggctgggagaggagccctataagatggtgaaaggcttctcaaatcgttcccgtaaagcc
aggatgatgtcggagacaaaaaatgagaacgacctggccttgtttggagagtggcagaca
gaagagtaccagcctcccattgctgttgatgggaaggttccccgtaacgactatgggaat
gtctacctgttcaagccctgtatgctgcctgtgggctgtgctcacctcagactgtccaac
ttgcaccgcgtggccaagaagctcagcatcgatgctgcccctgcggtgacaggcttcgac
ttccatggaggatactcccacgccgttactgatggctacgttgtttgtgaagagtttgag
gagattctgcgagcagcctgggtggaagagcaagagcttcagaaacagaaggaaaaagag
aaaagagaaaaaagggtgatttccaattggactctgctggtaaagggactcctgataaga
gagaagctcaagagacgctacagcaagaagaaccagggactcaggattcttgctgatgga
gaagagcctggtgggctgtcatctgatgaggaggcgggtgaaggtgccagtcctgcagct
aaaaatgcttctgaaactctggctatgtcgtggcctcagaacagacaagaagaggaggac
aaagactgtgtcagtgggctgcagaaaaaaaagatgacaaaacgagaaaaaaaaggacag
ggcaaacatttattcccttttgagaaaccttaa
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