Takifugu rubripes (torafugu): 101069845
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Entry
101069845 CDS
T02386
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101069845 (ssrp1)
03036 Chromosome and associated proteins [BR:
tru03036
]
101069845 (ssrp1)
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
101069845 (ssrp1)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
101069845 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
101069845
NCBI-ProteinID:
XP_011608899
Ensembl:
ENSTRUG00000013193
LinkDB
All DBs
Position
14:complement(4896020..4904879)
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AA seq
710 aa
AA seq
DB search
MGDTLEFNDIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHVYKYDGFRDTDFEKILEFFKANYKVELTERDMSVKGWNWGTAKFSGPLLQ
FDINENTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEISLMEVRFYVPPNQTDERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENINLALNMSEEDVERRFE
GKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDSGSD
ESFNPGEEDDDIAEEYDSNASASDSSDEGDDSEDESAKKKKAKKVKVVKEKKERKPRKEK
KQKDTGGPKRPMSAYMLWLNASRERIKSENPGISVTEISKKAGEMWRQLGKDEKEEWETK
AGEAKEEYEKAKKEYKESGRMPTTTSKKETKKSAGKKEEKKRKSAGGDKDKERGGGNDSF
KSREFIETSEESSSDSDRKSKSKKKKKKEESDEEEEEAMSTPASSEEESE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactttggagttcaatgacatataccaggaggtcaaagggtcctggaatgac
ggacggcttcgtttcagcaaacaaaatgtggtttacaagagcagcaagacaggaaaggtg
gacagcatccccgcaggagagctcaacctggctcagtggagacgagtgtgtttaggtcat
ggtatcaagcttggaacaagcacgggacatgtttacaaatatgatggatttagggacaca
gactttgaaaagatcttggagtttttcaaggcaaactacaaagtggagctaacggagagg
gacatgagtgtgaaaggatggaactggggtacggccaagttctctgggcctctgttacag
tttgacataaatgaaaacacagcatttgagatcccactttccaacgtgtcccaatgtgcc
actgggaaaaacgaggtgactctggagttccaccagaacgacgacacagagatctccctc
atggaggtccgtttctatgtcccacccaaccagactgatgaaagacaagatccagttgag
gcctttgctcagaatgtgctgtctaaggctgatgtgattcaggccactggcgatgctgtg
tgtattttcaaagagctgcagtgtctcactcccagaggaagatacgacatccgcatctac
ccgactttccttcaccttcacggtaagacctttgactacaagatcccctacaccaccgtt
ctccgactcttcctgctgccacacaaggatcaaagacagatgttctttgtgatcagtctg
gaccctcccatcaaacagggccagacacgttatcactttctcattctgctgttttccaag
gaggagaacatcaacctcgccctcaacatgagcgaggaggatgttgaacgtcggtttgag
ggtaaactcagtaaacacatgtcagggtcgctttatgagatggttagcagagttatgaag
gctctggtcaaccgcaagatcactgtgcctggaaacttccagggtcactctggtgctcag
tgcatcacctgttcctacaaggcttcttcaggccttctataccccctagagaggggcttc
atttatgtccacaagcctcctgtacacctgcgcttcgaggagatctcctgtgtcaacttc
gcccgaggcaccaccaccactcggtcctttgactttgaaattgagacaaaacagggaaat
cagtacaccttcagcagcatcgagagggaggaatatggcaaactatttgattttgtgaat
gccaagaagctcaacatcaagaacagagggttcaaagagaagaagggcatgaagggtaag
attgatgagtacagcgactcggacgacgaccaacacgacgcctacctggagaggatgaag
gctgagggcaagatcagggaggaaggcaacgacagcgatgagtccgattctggaagtgat
gaatccttcaatcccggggaagaagacgatgacatagcggaagagtacgacagcaacgcc
tcagccagcgacagcagcgatgaaggggacgatagcgaggacgagagtgcaaaaaagaag
aaggcaaagaaagtgaaagtggtgaaggagaaaaaagagaggaaaccacgcaaagagaaa
aagcagaaggataccggtggccccaagaggccaatgagtgcctacatgctgtggctcaac
gccagccgggagcggatcaagtcagagaacccgggaatctccgtcacagagatatcaaag
aaggccggcgagatgtggagacagctgggcaaggacgagaaggaggaatgggaaacaaag
gcaggagaggctaaagaggagtatgaaaaagcaaagaaggagtacaaagagagtgggagg
atgcccaccaccacttccaagaaggaaaccaaaaaatctgcgggtaaaaaggaggagaag
aagaggaagtctgcaggaggagataaggacaaggagcgaggaggtggcaacgacagcttc
aaaagtcgagagttcattgagaccagcgaggagagttcctccgactccgatcgcaagagc
aagtccaagaagaagaaaaagaaggaggagtcagatgaagaggaggaagaagcaatgtcc
acccctgccagctcagaggaggaatctgaatga
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