Takifugu rubripes (torafugu): 101069876
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Entry
101069876 CDS
T02386
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101069876 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101069876 (cpsf4)
03019 Messenger RNA biogenesis [BR:
tru03019
]
101069876 (cpsf4)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101069876 (cpsf4)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101069876 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
101069876
NCBI-ProteinID:
XP_003979006
Ensembl:
ENSTRUG00000024220
UniProt:
A0A674P853
LinkDB
All DBs
Position
5:4318643..4321435
Genome browser
AA seq
263 aa
AA seq
DB search
MQDILANVDHIKFDLEIAVQQQLGAQPLPFPGMDKSGSAVCEFFMRAACMKGAMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGRSCKFMHPRFELPMGASEQPP
LPLQSQNQSKSASAMGRSSMSLIQLTNSSPGINNTQMMPTQQNNMSTNRGPRPLDQVTCF
KCGDRGHYANKCTKGHLAFLSGQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatactagctaacgtggatcacatcaagtttgacttggaaatagctgtgcaa
caacagcttggagcacagcctctgcctttccccggcatggacaaatctggatcggctgtg
tgcgagttcttcatgagagcagcgtgtatgaaaggtgccatgtgtccctttcgccacatt
agtggcgagaagacggtggtgtgtaagcactggctccgaggactctgcaaaaagggagac
cagtgcgagtttctccacgaatatgacatgaccaagatgccggaatgctacttctactcc
aaatttggcgagtgcagcaacaaggaatgtccattcctgcacatcgatccagagtccaaa
atcaaagattgtccgtggtatgaccggggcttctgcaaacatggtcctgactgtcgacac
agacatacaagaagggtgatttgtgtcaactatctggtaggcttctgtccagaagggaga
tcctgtaaatttatgcatcctcgttttgagttgcctatgggagcttctgaacagcctccg
ctgcccctgcaaagccaaaaccagtcaaagtctgcatctgccatgggccgttcatcgatg
tctctaattcagctaaccaactccagtccgggcatcaacaacactcagatgatgcctact
cagcaaaataacatgagcaccaacagagggccacgacctttggaccaggtcacctgcttc
aagtgtggagaccggggccactatgccaacaaatgcactaaaggccaccttgccttcctg
agcggacagtga
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integrated database retrieval system
