Takifugu rubripes (torafugu): 101069965
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Entry
101069965 CDS
T02386
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03030
DNA replication
tru03410
Base excision repair
tru03420
Nucleotide excision repair
tru03430
Mismatch repair
tru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101069965 (pold1)
03410 Base excision repair
101069965 (pold1)
03420 Nucleotide excision repair
101069965 (pold1)
03430 Mismatch repair
101069965 (pold1)
03440 Homologous recombination
101069965 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tru03032
]
101069965 (pold1)
03400 DNA repair and recombination proteins [BR:
tru03400
]
101069965 (pold1)
Enzymes [BR:
tru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101069965 (pold1)
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
101069965 (pold1)
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
101069965 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
101069965 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
101069965
NCBI-ProteinID:
XP_003964532
UniProt:
H2SW10
LinkDB
All DBs
Position
5:5946669..5955555
Genome browser
AA seq
1104 aa
AA seq
DB search
MEFKRRNNDSLMGGAPQSKWAKKNTEWEDSPSQFEEELSMFLDADMDIEDQEGQASHDVI
PVGDLFTTDLNPRWRRPPAPALDPSTDTLVFQQIDLDYYLGVTAAGMPGQSQGKAPIVRM
FGVTDNGNSVCCHIHGFAPYFYVPAPNGFTSAHLGEFQKELNSAVLKDMRSNKDNISVTV
LAVDIARKENMYGYHGKRILDFLRITMAMPRLIAPAKRLLEQGLKFGPFPLHYYQAFEAN
IDFEIRFMVDTNVVGCCWIELPKGKYRVREENDLLVTDSQCLGKVSFCQYEVDIGWTDFI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQETKLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAATLKVN
PFPYLGRIRNSKSVLRDLNFQSKQMGRRENKTMNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSI
PIATLDFSSLYPSIMMAHNLCYTTLLQNTQDKDSLSPEDFIKTPTGNFFVKSSVRKGLLP
EILENLLSARKRAKAELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEIS
QSVTGFGRQMIEQTKQLVESKYTISNGYQADAKVIYGDTDSVMVKLGVATVNEAMSIGRE
AAEWVSSHFISPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNC
PLVANLINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGK
QAHVELAERMRKRDAGSAPNLGDRVPYVITKAAKGAAAYMKSEDPIYVLENSIPIDTQYY
LEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCRA
VLKTDAAVCDFCKKKESELYQKEIYHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCP
IFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaacggcgcaataatgactccttaatgggaggtgctcctcagtccaaatgg
gctaaaaagaacactgaatgggaggacagtccatcacagtttgaagaggaattgtcaatg
tttcttgacgcagatatggatatagaggatcaggaggggcaagccagccatgatgttatt
cctgttggcgacctattcactacagacctcaaccctcgttggaggaggcctcctgctcct
gcactcgacccatcaactgacactttggtcttccagcagattgatttagattattattta
ggggtgacagcggcaggcatgcccggccaatcacaggggaaagccccaattgttcgaatg
tttggggtgacagacaatggcaacagcgtgtgttgccacatccatggttttgcaccttat
ttctatgttcctgctccaaacggtttcacatctgctcacctgggtgaattccaaaaagag
ttgaattctgctgttctgaaggacatgaggtccaacaaagacaacatttcagtcacggtg
ttggccgtggatatcgcccgcaaagagaacatgtatggttaccacgggaaacgtattctt
gatttccttcggataaccatggcgatgcctcgtctcatagctccagccaagagactgctc
gagcaaggcctcaagtttggaccctttcccctacattattatcaggcttttgaggccaac
atagattttgagataaggtttatggtggacactaatgtggtgggatgctgctggattgaa
ctacctaaaggaaagtatagagtgcgagaagagaatgatctgttggtcactgattcccag
tgcctgggcaaggtgtccttttgtcagtatgaagtggatattgggtggactgatttcata
agccacccagcagagggagattggcagaggattgcaccactccgagtcctaagctttgac
atcgagtgtgcaggaagaaaaggaatctttcctgaagctgacaaggaccccgtgattcag
atcgcttccatggtgcagcgacaaggcgagacggagcccttcattcgcacagtgttcacc
ctccagtcctgcgccagcattgtgggctcccagatcttgtgtttcacacaggagaccaag
ctactgcagagctgggccgagtttttgaggacggtggaccctgatatcattactggatac
aatatccaaaactttgactttccctacctgcttaacagagcagctactctaaaggtgaac
ccttttccctaccttggtcggatacggaatagcaaatcagttctgcgtgatctgaacttc
caaagcaaacagatgggccgcagagagaacaaaaccatgaacatggagggccgggttcag
ttcgacctgctacaggtcctcctcagggactacaaactacgctcttatacactaaacgca
gtcagttttcacttcttgcaagaacagaaagaggacgtgcagcactccatcatcactgat
ctgcagaacggtaatgaacagacgcgccgtcgtttggccgtctactgcctcaaagacgcc
tacctcccgctgcgcctgctgcagaaactgatgtgcgtcattaattacatggagatggcc
agagtgacgggggttcctctcacctacctgctgtcaaggggacagcagatcaaagttgtc
tctcagctccttcgccaggccatgaagcaggacctggtgatgcctgtggtcaagacagaa
ggaggagaagactacactggcgccactgtcattgagccggagaaggggtattacagcatt
cctattgccaccctggatttctcttctctgtatccatccatcatgatggcccacaatctg
tgctataccacgctgctgcagaacacccaagataaagacagcctttcgccggaagacttc
atcaagactccaactggtaatttttttgtgaagagctctgtgaggaaaggacttttacct
gaaatcctggagaatctgctgtcggctagaaagagggccaaagcagagctaaagaaggaa
accgacccatttaagcggcaggtgctggacggccgacagcttgctctgaaaatcagcgcc
aactcagtttacggcttcaccggtgcgcaggtgggcaaactgccctgccttgagatctca
cagagcgtcactggttttggaagacagatgattgaacaaaccaaacagctggtggagtct
aaatacacgatttccaacggttaccaagccgatgccaaggttatttatggagatactgac
tcggtcatggttaagctcggagttgccacggtaaatgaggccatgagtatcgggagggag
gcagcagagtgggtatcctcccactttatttcacccatcaaactggagtttgagaaggtc
tattacccgtatctgctaatcaacaagaagcgatacgcaggcctctacttttcatccagt
gcggacacacatgacaagatggactgcaagggtatcgagactgtccgcagagacaactgc
cccctggtggccaatctcatcaatacctgcctgcagaagatcctcatagacagggatccc
cagggtgctgtagatcacgctaaagaggtgatctcagacctcctctgcaatcgcatcgac
atcagccagctcgtgatcaccaaggaactaacgcgtactgcccaggagtacgcgggcaaa
caggcgcacgtggagctggcagagagaatgagaaaaagagatgcaggcagcgctccaaac
ctgggagaccgggtcccatacgtgatcaccaaggctgcgaaaggagcagcagcgtacatg
aagtcagaggatccaatctatgtgctggagaactccattcccatcgacacgcagtactac
ctggagcaacagctgtctaagcccctgctccggatatttgaacccatcctaggagagagc
aaagctgagagtgtcctgctcaagggcgatcacacgcgctgcaagaccgtgttgacctca
aaagtcggaggcctcatggcatttgctcagaagaggagcacctgtatcggctgccgagct
gtgctgaagacagatgcggctgtgtgcgatttctgcaagaaaaaggagtctgaactgtac
cagaaggagatttatcacctgaatacattggaggagcgtttctctcgcctgtggactcag
tgtcagcgttgtcaaggttccctccacgaggatgtgctctgtaccagccgagactgtccc
atcttttacatgaggaagaaggtccagaaggacttggatgaccagagcaagctggtgtcc
cgctttggatggtga
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integrated database retrieval system
