Takifugu rubripes (torafugu): 101070158
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Entry
101070158 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tru01002
]
101070158
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101070158
Enzymes [BR:
tru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101070158
Peptidases and inhibitors [BR:
tru01002
]
Cysteine peptidases
Family C64
101070158
Ubiquitin system [BR:
tru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
101070158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
101070158
NCBI-ProteinID:
XP_003976496
Ensembl:
ENSTRUG00000004472
LinkDB
All DBs
Position
22:complement(15375295..15380642)
Genome browser
AA seq
1124 aa
AA seq
DB search
MSLLLSSKKKDKRILSGTCPDPKCQARLFFPAHGSVSIECTDCGQRHEQKNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPLLTRYGMDRQTGKAQLLR
DMNQGEVFDCSLLGDRAFLIEPEHVSTMGYGKDRSGSLIYLHDTLEEVKKSNGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDHYKALFQDFIDAAEWEDII
TECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVAED
QCRGKDGKLNKPICIAWSSSGRNHYIPLVGIKSSVLPKLPARLLPKAWGVPQELIRRYIK
LEPDGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHKIHPALVADVHQYVFRRTGVIGVQP
EEVTEAAKKLVLEKRLHRCLNCSALVELHVPQDWLGPGGKLYNLAKSTHGQLRVDKNYSF
PLNNLVCSYDPQQDVLVPDYTLSSLNTCTWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHFWEGREYDNLPEAFPITLEWGGRQVRETVYWFQYEMDSALNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDDYNPVSIERAHAQHGAPDAPPADPQPPTK
IILTGQKAKTLHKEELTMSRAERSIQQSIGEHAAATQKRHTDKLKQEQRGATSPEPGSPS
APATPTKSSPAANKEKKIRVSTSDGRQATLTLQASTTFAELQRGVARQFAIPPEQQCIRF
GFPPKGLASPREGEENEPVALQHGDRVTVEILKGPDKSPAPSEARGRHEAKTEEALTSGR
TSGRELQESIDLEISSLCLLATLMGEDVWSYAKTLPHLFQRGGVFYNIVMKDMGLMDGKH
CTLPHLSGKTFVYNAADERLELCVDAAGHFQIGPDVEERVKGALVQVGARGSREGSPAHS
VLRLGSGGVVRKKEQNVAAFQGKGHSLGSAGGSSPPEHRPITRQHSSGTDLSASVSRGPP
DLSQIPEDTTRELVRMAPGFVTTKDGRGVDPGVMEQQRRKLQEMVSSIQASMERHLKEQM
GGGKSGGEAAAGEPGKAELKTEELEEMESQPAEQSGAAEPMDHS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctgctcagctctaagaaaaaagataaacggattctgtcgggtacctgcccg
gacccgaaatgtcaggcgaggctcttcttcccagctcacggctccgttagcatcgagtgc
accgactgcggacaaagacacgagcagaagaacctgctaaatgtggaagaagtcacggat
ccagatgtcgtgcttcataatctgctcagaaacgccctgctcggcgtcaccggggccccg
aagaaaggcacggagctggtgaaagtgatgggtctgtccaactaccactgcaagctgctg
tccccgctgctcacccggtacggcatggacaggcagaccggcaaggcccagctgctgcgg
gacatgaaccagggagaggtgttcgactgctcgctgttgggggacagagccttcctgatc
gaaccggaacatgtctccaccatgggctatgggaaagaccggtccgggagccttatttat
ctccacgacactctggaagaggtgaagaaatccaacggtaacagagagtgtctcataccg
gtccacgtggacggagatgggcactgcctggtccatgctgtgtccagagctctggtgggc
cgggaactgttctggcacgctctgagggagaacctgaaacagaacttcaagcagaacctg
gaccactacaaggctctttttcaggatttcatcgacgctgcagaatgggaggacatcatc
accgagtgcgaccccttgttcgtcccgcctgaaggcgtcccgctcggactgcgcaatatt
catatttttgggctggccaatgtccttcaccggcccatcatcttgctggactcgctgagc
gggatgagaagctctggagactattccgcgacctttctgccgggactggtggccgaggac
cagtgcagaggaaaagacgggaagctcaacaaacccatctgcatcgcctggagcagctct
ggcaggaaccactacatccccctggtgggcatcaagagcagcgtgctgcccaagctgccg
gcccgcctgctgcccaaggcctggggcgtcccccaggagctcatcaggaggtacatcaag
ctggagccagacgggagctgcgtgatcggcggcgaccgcagcctgcaggataaatacctg
atgcggctggtcaatgccatggaggaggtgttcatggagaagcacaaaatccacccggcg
ctggtggccgacgtgcaccagtacgtcttcagacggaccggcgtgatcggcgtgcagccg
gaggaggtgaccgaggccgccaagaagttggtgttggagaagaggctgcaccgctgcctg
aactgcagcgccctggtggagctccacgtgccgcaggactggctgggcccgggggggaag
ctctacaacctggccaagtccacccacggccagctgcgggtggacaagaactacagcttc
cccctcaacaacctggtctgctcctacgacccccagcaggacgtcctggtcccggactac
acgctgagttccctcaacacctgcacctggtgccacggcacgtcggtgcgccacatccac
ggcaacggctccgtcgtctacctggacggggacagaaccaacacccgctcgcagggcggg
aagtgcggctgcggcttcaagcacttttgggagggcagagaatacgacaacctgcccgag
gccttccccatcacgctggagtggggggggcggcaggtgagggagacggtgtactggttc
cagtacgagatggactccgccctcaacagcaacgtgtacgacgtggccatgaagctggtg
acgaagcatttccccggtgagttcggcagtgagatcctggtgcagaaggtggtcaacacc
atcctgcaccacacggccaagaagaaccccgacgactacaacccggtgagcatcgagcgg
gcccacgcgcagcacggcgcccccgacgccccgccggccgacccgcagccccccactaag
atcatcctgacgggtcagaaggcgaagacgctgcacaaggaggagctgacgatgagccgg
gcggagcgcagcatccagcagagcatcggcgagcacgccgccgccacgcagaagcgccac
actgacaagctgaagcaagagcagcgaggcgccacgtcaccagaacccggctccccttcg
gccccagccacgcccacaaaatcctcccccgcggccaataaggagaagaagatccgcgtg
agcaccagcgacggccggcaggccacgctgaccctgcaggcctccaccaccttcgccgag
ctgcagaggggcgtcgccaggcagttcgccatccctccggaacagcagtgcatccgcttc
ggcttccctcccaaagggctggcgtcgccgagggagggcgaggagaacgagcccgtggcc
ctgcagcatggcgacagggtgaccgtggagatcctgaagggccccgacaagagccccgcc
ccctccgaggcccgcgggcgccatgaggcgaagactgaggaggcgctgacgtcaggcagg
acgagcggccgcgagctgcaggagagcatcgatctggagatctcctctctgtgtctccta
gcaaccctgatgggtgaggacgtgtggtcctacgccaagacgctgccacacctgttccag
aggggcggagtcttctacaacatcgtgatgaaggacatgggtctgatggacgggaaacac
tgcaccttaccgcacctgagcgggaaaaccttcgtctacaacgcggcggacgagcgcctg
gagctgtgcgtggacgccgccgggcacttccagatcggccctgacgtggaggagcgcgtg
aagggggcgctggtgcaggttggcgccaggggcagcagagagggaagccccgcccacagc
gtcctgcggctgggcagcggcggcgtcgtccgtaagaaggagcagaatgtggcggcgttc
caaggtaaaggccactccctgggcagcgccggcggctcctcccctcctgagcaccggcct
atcacgcgccagcacagcagcggcacggacctcagcgccagcgtctccagggggcccccc
gacctgtcccagatccccgaggacaccacgcgggagctggtgcgcatggcgccgggattt
gtcaccaccaaggacggccgcggcgtcgaccccggcgtgatggagcagcagcggcggaag
ctgcaggagatggtgtcgtccatccaggcctccatggagcgccacctgaaggagcagatg
ggcggcggcaagagcggcggggaggccgcggccggggagcctgggaaggcggagctaaag
acggaagaactggaggagatggagagccagcccgctgagcagagcggcgcggcggagccc
atggatcactcctga
DBGET
integrated database retrieval system
