Takifugu rubripes (torafugu): 101070792
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Entry
101070792 CDS
T02386
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru00260
Glycine, serine and threonine metabolism
tru00630
Glyoxylate and dicarboxylate metabolism
tru00670
One carbon pool by folate
tru01100
Metabolic pathways
tru01200
Carbon metabolism
tru01230
Biosynthesis of amino acids
tru01240
Biosynthesis of cofactors
tru04981
Folate transport and metabolism
Module
tru_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
101070792 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
101070792 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
101070792 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
101070792 (shmt1)
Enzymes [BR:
tru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
101070792 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Nif11
Motif
Other DBs
NCBI-GeneID:
101070792
NCBI-ProteinID:
XP_029692269
Ensembl:
ENSTRUG00000003948
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All DBs
Position
5:4314517..4318505
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AA seq
482 aa
AA seq
DB search
MSLTNGHIVSKETWESHNKMMLEPLATNDSEVFDIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEYVDDLERLCQKRALEAFGLDPEKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPKLIIAGTSCYSRNLDYARMRQIANENGAYLMSDMAHISGLVAAGAV
PSPFEHSDIVSTTTHKTLRGCRSGIIFYRKGVRGVDAKGKEIMYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMSPEFKAYQMQVLANCKALSSALIDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMVQDDFKKVA
EFIHRGIVLTLEVQGSLDPKAPLRDFLQALKREEKFQQRVAEIRTEVEAFASQFPMPGLD
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgacaaatggacacattgtgagcaaagaaacatgggaatctcacaacaagatg
atgttggagcccctggccaccaacgactctgaggtttttgacatcataaaaaaagagaag
cacagacagacgtacggtctggagctcatcgcatccgagaactttgcgagcagagctgtt
ttggaggctctgggttcctgtatgaacaacaagtactctgagggataccctggtcagagg
tactatggaggtacggaatatgttgatgatctggagagactctgtcagaaaagggcactg
gaggcgtttggtctggacccagagaaatggggtgtcaacgtgcagccatactctggttca
cctgctaactttgccgtctatacggccgtcgtggagccccatggaaggatcatgggactc
gaccttccggatggaggtcacctgacacacggcttcatgaccgaaaagaaaaagatttca
gcgacgtccatattttttgaatccatgccttacaaggtgaacccagaaaccggctacata
gactatgacagactacaggaaaacgctcgccttttccacccaaagctcatcattgcagga
acaagttgctattctcgcaacctcgactatgctcgcatgaggcagatcgctaatgagaac
ggcgcatatctgatgtcagacatggcacacatcagcggtctggtagctgctggagctgtg
ccgtcaccctttgagcacagcgacatcgtgtccacaacaacacacaagacgctccgcggc
tgccgctcaggcatcattttctacaggaaaggggtgcggggtgtggatgctaaaggaaag
gagatcatgtataatttggagtctctgatcaatcaggctgtgtttcctgggctgcaggga
gggcctcacaaccacgccattgcaggtgttgctgtagcactcaagcaagccatgtcacca
gagttcaaggcctaccagatgcaggttcttgccaactgcaaagctctttccagtgcccta
attgaccacggctacaagattgtcactggtggttctgacaaccatctgatcctgctggac
ctgcgcagcaaaggaaccgatggagggcgagcggagaaggttctggaagcttgtgccatt
gcctgtaataagaacacctgccctggagataaaagcgcgttgcgtcctagcggcctgagg
tttggatcaccggctctgacctcccggggtatggtgcaggatgacttcaagaaggttgct
gagtttattcacagaggtattgtgctgaccctggaggttcagggaagccttgatcccaag
gctcctctgagagacttccttcaagcactgaaacgggaagagaagttccagcagcgggta
gcagaaatcaggacagaggtggaagcatttgcaagtcaattcccaatgccaggtttagat
gaattgtaa
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