Takifugu rubripes (torafugu): 101071008
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Entry
101071008 CDS
T02386
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101071008 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101071008 (usp39)
Spliceosome [BR:
tru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101071008 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101071008
NCBI-ProteinID:
XP_003975010
Ensembl:
ENSTRUG00000011317
UniProt:
H2TV64
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All DBs
Position
21:13209485..13213858
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AA seq
500 aa
AA seq
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MMVSLKREREDEVDDDDNEETVSSKVRRGRVVEDKRSRHCPYLDTINRSVLDFDFEKLCS
ISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLNTLKFYCLPDNYEIIDSS
LEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFCN
VPPLRNFFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL
CSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSILTKVFQGSMRIFTKKLPHPDLM
PEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNT
EKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTE
EAQVSEKNTTYDLVANIVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSE
AYIQIWKRQERDVTNNHAAV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttctctaaagagagaaagagaagatgaggtggatgatgatgacaacgaagaa
acagtgtcatccaaagtacgacgaggacgtgttgtagaagacaagagaagtcgccattgc
ccataccttgacactataaacaggagtgtcctggattttgactttgagaaactctgctcc
atctcgctctcccacatcaacgtctatgcttgcttgatatgtggaaaatactttcaaggt
agaggtctgaagtcccatgcttacacgcacagcgtgcagttcacccatcacgtctttctg
aatttaaatactctcaagttctattgtctgccagacaattacgagatcattgactcttcc
ttagaagacatcacctatgtgttgaagccaacctttacgaaacagcacatcgcagggctg
gacaagcaggggaaactgtaccgagcctatgacggtacaacgtacctgccaggaattgta
gggctcaataatatcaaagcaaatgactatgccaatgtggtgctgcaggctttttgcaac
gttccacctttgcgaaacttctttctggaggaggagaactacaaggggatccgcaggcca
cctggagatattatgttccttctggtgcagaggtttggcgaacttatgcgcaagctttgg
aatcccagaaacttcaaggcccacgtttctccacacgagatgctgcaggctgtggtgctc
tgcagcaagaagaacttccaaattaccaagcaaggagatgctgtggacttcatgacgtgg
ttcttgaatgctctccacggagctctcggaggcaccaagaaaaaaccatcaatccttacc
aaagtatttcaaggctcgatgcggatcttcaccaagaaacttccacacccggatttaatg
ccagaagagaaggaggcattgctggttacagaggagtaccaggagcagatgtctgagtcc
actttcctgtttctgacccttgacctgccaacagctcctctgtataaggatgaaaaggag
cagctgatcatcccacaagttccgctgttcaacatcctggctaagttcaatggcaacact
gagaaggagtacaaaacctacaaggagaattttctcaaaaggtttcagctgaccaaactt
cctccatacctcgttttctgcattaaaagattcaccaagaacaacttctttgtggagaag
aaccccacaatcgtcaacttccccatcaccaatgtcgaccttcgggagtacctgacagaa
gaagcccaagtttcagagaagaacacgacttatgacctcgttgctaacatagtgcatgat
gggaaaccaaccgagggagcgtaccgaatacatgttctgcaccacggaaccgggaagtgg
tatgagatgcaggacctgcaggtgattgacatcctgccccagatgattacactgtcggag
gcctacatccagatctggaagaggcaagaaagagatgtgacgaacaaccacgcagccgtt
taa
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