Takifugu rubripes (torafugu): 101071053 Help Entry 101071053         CDS       T02386                                  Symbol prpf19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism tru  Takifugu rubripes (torafugu) Pathway tru03040   Spliceosome tru04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:tru00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101071053 (prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101071053 (prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:tru03041]     101071053 (prpf19)    04121 Ubiquitin system [BR:tru04121]     101071053 (prpf19)    03400 DNA repair and recombination proteins [BR:tru03400]     101071053 (prpf19) Enzymes [BR:tru01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101071053 (prpf19) Spliceosome [BR:tru03041]  Complex B   Other components    Prp19 complex     101071053 (prpf19)  Complex C    Prp19-CDC5 complex     101071053 (prpf19) Ubiquitin system [BR:tru04121]  Ubiquitin ligases (E3)   U-box type E3    101071053 (prpf19) DNA repair and recombination proteins [BR:tru03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     101071053 (prpf19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Prp19 Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_C PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_EIPR1 U-box Beta-prop_RIG_2nd Beta-prop_DCAF4 PROPPIN Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N eIF2A Cytochrom_D1 Nucleoporin_N B-prop_COPA_B_2nd Ge1_WD40 zf-Nse ATG16 Motif Other DBs NCBI-GeneID:  101071053 NCBI-ProteinID:  XP_003970407 Ensembl:  ENSTRUG00000008502 LinkDB All DBs Position 14:complement(6188096..6192384) Genome browser AA seq 505 aa AA seqDB search MSLVCAICNEVPEHPCVSPVSNQVFERRLIEKYIAENGTDPMNGQPLSEEQLIDIKVSHP IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVAPQAIAASQPTAVGAGGEPMEINEQVGMTPEIIQKLQDK ATILTTERKKRGKTVPEDLVRAEDLGKYHQVASHVGLHSASVPGILALDLCPSDTSKVLT GGADKNVVVFDKNEEQIVATFKGHTKKVTSVIYHPSQSVVFSASPDSTIRVWSVTGGNCV QVVRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDESAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSLKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFTDHTGLVT GVSFGDNARFLSSAGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttagtttgtgcaatctgcaatgaagtgccggagcacccttgcgtctccccggtg tccaaccaggtgtttgaacgcaggctgatcgagaagtacatcgcagagaatgggacggat ccgatgaatgggcaaccgttgtctgaagaacagctcatagatataaaagtctcgcatcct attcggccaaaagccccctcagcaacaagcattcctgccattcttaagtcacttcaagat gagtgggatgctgttatgcttcatagcttcacccttcgacaacagctgcagactactcgc caagaactgtcgcatgctctgtaccaacatgatgccgcctgcagagtcattgctcgactc accaaagaggtcactgctgcaagagaagctcttgctacactcaagccccaagctggattg gttgccccccaggctattgctgcctctcagccaactgccgtgggtgctggtggagagccc atggaaattaatgaacaggtgggaatgactccggagatcatccagaagctccaagacaaa gctaccatcctcactacagaaaggaagaagaggggaaaaactgtcccagaggacttggtt agagctgaggatcttggcaaatatcaccaagtggcctcgcatgtgggtcttcatagtgca agtgttcctggtatcctggctctggatctgtgtccttcagacaccagcaaagttctcact ggtggagctgataagaatgtggtggtatttgacaaaaatgaggagcagattgtggcaaca tttaagggtcacaccaagaaggtcacctctgttatttaccatccatcccagtctgtggtc ttctcggcatctccagacagcaccatacgtgtgtggtctgtcactgggggcaactgtgtc caggtggtacgtgcccacgaggctggtgtcaccgggctctcccttcatgcaactggagac tacctgcttagctcctctgaggatcagtactgggcattttctgatatccagaccggtaga gtgctcaccaaagtcacagatgaaagtgccggctgtgctctgacctgtgctcagttccac cccgatggtctcatttttggcaccgggaccgctgattctcaaatcaagatatgggatttg aaggagcgtacaaatgtggccaacttcccgggccactctggacccgtcacctccattgct ttctctgagaatggatactatctggccacaggcgctcaggatagctctctgaaactgtgg gatctgaggaaactgaagaacttcaagaccatcactctggacaacaattatgaggtgaaa tctctcgtgttcgatcagagcggaacctacttggctgtcggaggatctgacatcagagtc tacatctgcaagcagtggtctgaggtcctcaactttaccgaccacactggattggtgact ggagtttcctttggcgataatgctcgtttcttgtcctctgcaggaatggatagaagtctc aaattttatagcctgtag

DBGET integrated database retrieval system