Takifugu rubripes (torafugu): 101071175
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Entry
101071175 CDS
T02386
Name
(RefSeq) laminin subunit alpha-3-like isoform X3
KO
K06240
laminin, alpha 3/5
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101071175
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101071175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_I
Laminin_B
Laminin_G_2
Laminin_II
EGF_LMN_ATRN
Laminin_G_1
Laminin_G_3
KASH_CCD
ATG17_like
SlyX
Phage_int_SAM_1
Motif
Other DBs
NCBI-GeneID:
101071175
NCBI-ProteinID:
XP_011617085
LinkDB
All DBs
Position
22:971898..1004011
Genome browser
AA seq
3021 aa
AA seq
DB search
MRNMARGMRGARLFAVFLMFSTAFVTRTHGQEAFDDPIGFNLNPPYFNLAAGSRISATAT
CGEDEAGTPRHDLYCKLVGGATTGVPTENIQGQYCSYCNSRDPSNAHPVSNAIDGTERWW
QSPPLSRGLVHNEVNVTLDLGQLFHVAYILIKFANSPRPDLWVLERSVDHGRTFTPWQYF
AHSKRECIERFGKQPNARISGDDDQICTTEYSRIVPLENGEIVVSLVNGRPGSKRFTYSP
VLQDFTKATNIRLSFLRTNTLLGHLISKAQRDPTVTRRYFYSIKDISVGGRCVCHGHAQV
CAGGGDQDRTNRLQCECQHNTCGELCDRCCPGYNQKPWRAATVDSPNECQPCQCFSHSSD
CFYDPEVEKNRASLDTFGRYDGGGVCTNCQHNTAGVNCERCIQGFYRPFQVPPESPSGCI
PCRCDERTTAGCEMGSGRCICKPQFSGHNCDVCADGYIYYPQCIRYPVFTTSTKSPAGPI
VEPSPCPPGYFGSPSCQQCVCDYRGTEREVCDTSGRCLCRRGVAGERCDRCQPGHHSFPS
CQGCVCGGAGVADSRCGPSGRCVCLPNYRGQSCEECAPGYYGYPECAACQCSTEGSYGNV
CNPVSGQCLCLPGVVGQQCDQCASGLRFPQCSGSIHGCNSAGSAVVDPLTGSCRCLENVE
GTLCDRCKPLYWDLAVVNPEGCKECQCDLKGTLSGVGDCQQKSGQCRCKPNACGRSCNTC
KDGYFQLQKKKYFGCQDCQCDVGGAVDVSCDETSGQCRCRDNVVGRQCSEPAPNYYFPTL
HHLKFEMEDGVTPNSRPVRFGFNQREFPDFSWRGYAVMSPAQSQVRVTVYVDPRGSGPHL
FRLVLRFINLSGAGVTGSIRAADNRGAAGSDQSREVIFPESPSPSFLTVPGEGFAQPFEL
TPGKWIVHLRAEGILLDYLVLLPQDYYEAPLLREQITQPCTYSPTASRDANCLLYKHVPL
DGFSSALGSRGTLSSRRRRRRRRQAHVRRPTPDHPEMAVLSGRQSNLQLNLRVARPGPYV
LILEYASEVDAAQNLNILISDQSGEYVPARANVYSCTYSFLCRSVALDASNRVSVLQLSH
KTEVLMQTSTTSFLLYKVSAVPAEEFSMDYVEPKPLCVSTHGRFTEDSRHCIQSQFERPA
SARVLYAARDGQLSSAPAASPQRQEDVNWRRRRQTVVPGPDGVLLKFPQTEITFTPQEPL
RGRYVALMHYHQPEHASFPVDVRVAAGREWKGSLNASFCPAVSGCRKAVLTNGQTALDFD
GDSWQAPSIAVTVPPNKTLVVDYILLVPEGSYTPKLLKEKLVDKSADFVQRCRSEGFHID
PKSASPFCRDSARSLAAAYNDGALPCNCHRSGSEGSSCDPAGGQCACRPHVIGRQCTKCA
SGYYGFPYCRPCECGRRLCDEVTGKCICPPQTVKPSCDVCQAQTFSYHPLLGCDGCECSP
TGIDDATRPDCDRLTGQCNCKPRISGRRCDRCAAGYYRFPECLPCNCNRDGVTPDVCHPD
SGRCLCKKNVAGSKCDACKDGGFYFDPSNPHGCTSCFCFGATDQCRSSSLRRGKFVDMDG
WRLESLDQEEVSSVLNPVSDTVVADVQELSPTVQTLHWVAPSSYLGNKVSSYGGFLTYQV
KSFGIPSEGMTLMDRRPDVVLTGQGMTLVHVAPQVPLADRLYQGRVQLLEGNWRHAINNR
PVSREELMMVLADLVGLRINALYFTRSQRLSLGEVGLEETTRDGTGGPGNTVEQCSCPPQ
YTGDSCERCSPGYYREDSVPFPGRCVPCECNGHAEECEDKTGRCLNCRYNTAGDRCERCK
EGYYGDGARGTCRVCPCPFSVSTNSFAVGCREVFGAFQCICRDGYTGDRCQSCAPGYFGD
PLAPGGRCQPCQCNGNGNNCDPRTGVCKNTLEPGDTDEHCQECDNCAQTLLNDLEKLDDE
LERIKAQLGNSTASRSAQDRLKKLEKNVADTKNLVNKFSSIINNQKPRIDQLDKDTGVLS
DDIKALKQKVEKSAADADRAVTNAEKTHKRAADLDSEVEKLRKKIQDLLQKLKESGTTVP
SKDSEKLFRDAERMVKEMEKRNFTPQKTAAQKENDEAKKLLEYIKANVSRQYDENNETAN
KLQDLLKGYEAKLKDLDQALKDAKDLVKKANTQNGLNGQALADLQRRVQELKEERETVGG
QMDMARNELKKTKELLDMLDDSKTEYERLAAQLDGAKTEVTKKVNEISKAAAKEDIVEAA
EEHARNLSKLAKELEDSVRNASGRPEVRNARDAIDAYKNITDAINAAEAAANDAKTAADR
ALNSVKDQRLTERAKDLKDNSNNLLNEAERTEKDLKKAASDIRNLNKRLIDADKKKKALQ
KNLEDAQNQLNNIRRDDIRDMLDEAKRKAASANGTASDTMDRLDAIKKELDKISVAPGDG
NLNNALTDVDQSIKDLLKSIPTLNDKISEVENLTSQFSQINNITGNIKKIKELIEQARDA
ANRISIPMKFSGAGHVELHPPKNLEDLKAYTSMSLSLQRPEGRGDGSRRRRRRQNQGSAN
MFVLYLGSRDSSKNYLGMMVRNNVLYGVYKLDGQEYEMETGPIISSPSEPARFDRVDLNR
IYQDAQMTLTKDITSGKSIPPIEGRKQGEGSKNLLDLSPSDVVFYVGGYPANFTPPASLN
YPMYEGCIEFFSINDKAVSLYNFRAKDKINLQTPCKRYVAPVTSNYYEGTGYSKVLLKKR
NPALVISMALRFRSENGLILYLGSEDYYFTVSVEKGIVFIRSNLLDKPATSDQKIFPKED
WVEVRIISAFPGKMIVQLASKEVVSAQAAYKNDDFKESYIGGIPEDLRTRDNITMRPFKG
CLTNLKNVDVTEQVGVSKGCPEQSLVVRKAEFNLQSSLSADLKGLGLDKDVTVSLGFKST
QSRGLLLQDKQPANGMNLRLENGHVVLHFNDKMWKSNKQYNDGQWHYLTVTRRAGRIELL
VDDEDKGQEESGTSVPDTGGLLFLGRNQFQGCMSNLYTRRPDNLYKAEDFSTFVSSGDVL
LDVCAADSPAQLMRDRGAKKR
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacatggcgagagggatgagaggagcgcgtctcttcgctgtatttctgatgttt
tccacagcttttgtcactcgcacccacggacaagaggcttttgacgacccaataggattt
aatttaaaccctccatatttcaacctcgcggcggggtccaggatttctgccacagccacg
tgcggtgaggatgaggctgggacacccagacatgatttatattgtaaactcgtaggtgga
gcgaccaccggagttccgactgaaaatatccagggtcagtactgcagctactgcaactcc
cgagaccccagcaacgcccacccggtgagcaacgccatcgatgggaccgagaggtggtgg
cagagcccccccctctccaggggtctggtccacaacgaggtgaatgtcaccctggatctg
ggtcagctcttccacgtggcctacatcctcatcaagtttgccaactctcctcgccccgac
ctctgggtgctggagcgctccgtggaccacgggagaaccttcacgccctggcagtatttt
gctcattcaaagcgtgagtgcattgaaaggtttgggaagcagcccaacgctcgtatatca
ggagacgatgaccagatctgcaccacagaatactctcgcatcgtccccttggagaacgga
gagattgtggtgtctctggtcaacggccggcccggctccaaaaggttcacctactcgccg
gtgctgcaggacttcaccaaggccaccaacatccgcctgagcttccttcgcaccaacacc
ctgctgggccacctgatctccaaggcccagagggatccgaccgtcacgcgcaggtatttc
tacagtatcaaagacatcagcgtgggtgggcgctgtgtctgccacggccacgctcaggtg
tgcgctggggggggcgaccaggaccggacaaacagactccagtgtgagtgccagcacaac
acctgcggcgagctgtgcgatcgctgctgccccggctataaccagaagccgtggcgcgcc
gcgactgtcgacagtccgaacgaatgtcagccctgccagtgtttctcccattcctcagac
tgtttttacgacccagaggtggaaaagaatcgagcaagtttagacaccttcggcaggtac
gacggaggaggcgtgtgcaccaactgtcagcacaacactgccggggtgaactgtgagcgc
tgcatccaggggttctacaggcctttccaggtgccacccgagtcaccatctggatgcata
ccctgcagatgcgacgagaggaccacggcagggtgtgaaatgggctccgggaggtgcatc
tgcaagccacaattttccggccacaactgcgacgtctgcgccgatggttacatttactac
cctcagtgcatccgatatcctgtgttcaccacatccaccaaatcccccgcaggaccaatt
gttgaaccttccccctgtcctccgggatattttggctcaccgagctgtcagcagtgtgtg
tgtgactacagagggacagagcgggaggtgtgtgacacgtcaggccgctgcctgtgccgc
cggggggtcgccggggagcgctgcgaccgctgccaaccaggacatcactccttcccatcc
tgccagggctgcgtgtgtggcggcgctggagtggccgacagcaggtgcggtccgagcggc
cggtgtgtgtgtctgcccaactacagaggacagagctgcgaggagtgcgcacctggttac
tacggatacccagaatgtgccgcctgccagtgttccacagagggctcctacggtaacgtc
tgtaacccagtgtcgggccagtgtctgtgtctccccggggtggtgggccagcagtgtgac
cagtgcgcctctggactccgcttcccccagtgttcaggctccatccatgggtgcaactca
gcaggaagcgcggtcgtcgatcctctaacgggctcctgccgctgtctggagaacgtagag
ggaaccctgtgtgataggtgcaaacctctctactgggatctggctgtagtcaatcctgag
gggtgtaaagaatgtcagtgtgatttaaaaggaaccctgagtggtgttggggactgtcag
cagaaaagtgggcagtgtcgctgcaagcccaacgcttgtggacgttcctgcaacacctgt
aaggacggctacttccagctgcagaaaaagaaatactttggctgtcaagattgccagtgt
gatgtcggtggagctgttgacgtgtcctgtgacgagacatcgggacagtgtcggtgtcgg
gacaatgtggtcggacgtcagtgcagcgagccagcaccaaactactactttcccaccctc
catcatctcaagtttgagatggaggacggcgtcacgcccaattccagaccagtacgtttt
gggtttaaccagcgggagttcccagatttcagctggagaggttatgctgtaatgtctcct
gcacagagtcaggtcagagtaacagtgtatgttgaccccagaggcagcggcccgcatttg
tttcgcctggttctgcgtttcattaacctgagcggcgccggagtgactggtagcatcagg
gctgccgataacagaggcgctgcagggtccgatcagagtagggaagtaatattcccggag
agcccctccccgtccttcctcactgtcccgggagagggcttcgcccagccctttgaactg
actcccgggaaatggatcgttcatttaagagccgaggggatcctgctggattatttagtg
ctgcttcctcaggattactacgaggcccctctgctgcgggaacagatcacccagccgtgc
acttactcgcccacagcaagcagagatgcaaactgtttgttgtacaagcacgtgcccctg
gacggcttcagctcagcactgggatcacgaggaacgctctccagccgccgcaggcgcagg
cggcgcagacaagcacatgtgcggcgtcccacccccgatcaccctgagatggctgttctc
agtgggagacagtcaaacctccaactcaatctgcgcgtggcccgtcctgggccgtatgtc
ctgatcttggagtacgccagcgaggtggacgctgcccaaaacctcaacatactcatcagt
gaccagtcaggagagtacgtccctgcacgtgctaacgtttacagttgtacctacagcttc
ttgtgccggagcgtcgccctggacgccagcaaccgtgtgtctgtgctgcagctctctcac
aagacggaggttctcatgcaaacatcaacaacttccttcctgctgtacaaagtgtctgca
gtccctgcagaagagttctctatggactatgtggaaccaaagccgctctgtgtctccact
catggacgcttcactgaagacagtcggcactgcattcagagccagttcgagaggccggcg
tcggcccgggtcctgtatgcagcacgggatggacagctgtcctcggcaccggctgcttct
ccgcaacgccaggaggatgtgaactggagacggagaaggcagacggtggtccccggtcct
gatggcgtcctgctgaagttccctcagacggagattactttcactccccaggagcccctc
aggggccgatacgtggccttgatgcattatcaccagcctgaacatgcctccttccccgtc
gatgtccgcgtggctgcgggacgagagtggaaggggtccttgaatgcatcattctgccct
gctgtgtcaggctgcaggaaggccgtgctcaccaatggacaaactgccctcgactttgat
ggggattcttggcaggcgccaagcatcgctgtgacggtgccgccaaacaagactcttgtt
gtggattatatcctgctggttcctgagggcagttacactccgaagctcctgaaagagaag
ctggtggataaatctgcagatttcgtccaacggtgcaggagcgaaggcttccatatcgac
cccaaatccgcatcgccgttctgcagagactccgcccgctcgctggcagcggcctacaac
gatggcgctctgccctgcaactgtcacagatccgggtccgaggggtcgagctgcgatccg
gctggaggacagtgcgcctgccgaccgcacgtcatcgggcgtcagtgcacaaagtgcgct
tcgggatactacggcttcccctactgcagaccgtgcgagtgcggccgtcgcctgtgcgac
gaggtgacggggaaatgcatctgcccccctcagacggtgaaaccgtcctgcgacgtgtgc
caggcccagactttcagctatcaccccctgctgggctgcgacggctgcgaatgctctccg
accggaatcgacgacgccacgaggcccgactgcgaccgcctcacgggacagtgcaattgc
aagcctcggatcagcgggcgccgctgtgaccgctgcgccgcgggatactatcgcttcccc
gagtgtcttccttgcaactgtaaccgcgacggcgtcactccggacgtgtgccacccagac
agcgggaggtgtctctgcaagaaaaatgttgccggcagcaagtgtgacgcctgcaaggac
ggcggcttctactttgacccctccaaccctcacggatgcaccagctgcttctgctttgga
gcaactgaccagtgtcggagctccagcctccgcagggggaagtttgtggacatggacggc
tggcgcctggaaagccttgaccaggaagaggtttcgtcggtcctgaacccggtcagtgac
acggtggtggcggacgtccaggagctttcacccacagtccagactctccactgggtggcg
ccgtcctcctatctggggaacaaggtttcatcctacggcggtttcctcacctaccaggtc
aaatcttttgggattccaagcgagggcatgaccctgatggacaggagacctgacgtcgtg
ctcaccggtcagggtatgaccctggtccacgtggccccccaggtcccccttgctgatcgg
ctgtaccagggcagagttcagctcttggagggaaactggcgtcacgctatcaacaacagg
cccgtttccagggaggagctgatgatggtcctcgctgacctggttggactcaggatcaat
gctctgtacttcactcggagccagcgactgagcttaggggaggtgggcctggaggagaca
actcgggatgggactggaggtcctggaaacacagtggagcagtgttcctgtccgccccag
tacaccggagactcctgtgagagatgttcccctggttactacagagaggacagcgtgccc
ttccccggccgctgcgtgccctgtgagtgcaacggtcacgctgaagagtgcgaagataag
acggggagatgcctgaactgtcggtacaacacggcgggagatcgatgcgaacgctgcaaa
gagggttactatggagacggcgctcgggggacgtgtagagtctgtccgtgtccattcagc
gtctccacaaacagcttcgcagtaggttgcagagaggtttttggagccttccagtgcatc
tgcagagacggctacaccggagacaggtgtcagagctgtgctcctggttattttggcgat
cctctggcgcccggaggaagatgtcagccctgccaatgcaacggaaatggcaacaactgt
gatcccaggactggagtttgtaagaacacactggaaccaggagacacagacgagcactgc
caagagtgtgacaattgcgcccagactttactcaacgatttggagaagctggacgatgag
ctggagaggatcaaggcccagctgggtaacagcactgccagccgctccgctcaggacagg
ctgaagaagctggagaagaacgtggcagacaccaagaatctggtcaataagttctcctcc
atcatcaacaaccaaaagcccagaatcgaccagttggacaaggacacgggcgttctttca
gatgacatcaaagctctcaaacaaaaggtggagaagagcgctgctgatgctgacagggcg
gtgacgaatgctgaaaagacccacaagagggcggcagatctggactcggaggtggaaaag
ctacgcaagaaaatccaagatttgctgcaaaagctgaaggagtcgggcaccacggtgccc
agcaaagactcagagaagctgttcagggatgctgagaggatggtgaaggagatggagaag
aggaacttcaccccccagaagacagctgcccagaaggaaaacgatgaagcaaagaaattg
ctggagtacatcaaggctaatgtgagcagacagtacgatgagaacaacgagacggcaaac
aaacttcaggacctattaaagggatatgaagccaagctgaaggacctggaccaggccctg
aaggacgccaaggatctggtgaaaaaagccaacacgcagaacgggttgaacggacaggcg
ctggcagatctgcagagacgcgtccaagagctgaaggaggagcgggagacggtggggggc
cagatggacatggccagaaatgagctgaagaagacgaaggaattactggacatgctcgac
gacagcaaaacggaatacgagcgcctggcggcacagctggacggagccaagactgaagtg
accaagaaggtgaatgagatttccaaagctgcggccaaggaagatatagtggaggctgcc
gaggaacacgccaggaacctctccaagttggccaaggagctcgaggactctgtgagaaac
gcaagcggtcgtcccgaggtccgcaacgccagggacgccatcgacgcctacaagaacata
acggacgcgattaatgctgctgaagctgcagccaatgacgccaaaacagcagcggacaga
gctctgaatagcgtcaaagaccagaggctgacagaaagagcaaaagacctgaaagacaac
agtaacaacctcctcaacgaagcagaaagaactgaaaaagacctgaaaaaagctgcaagt
gacatcagaaatctaaataagcgcctgatcgatgctgacaagaagaagaaagccctgcag
aagaacctggaggatgctcagaaccagctgaacaacatcaggagagatgacatcagagat
atgctcgatgaagccaagaggaaggcggcttcagccaacgggacagccagtgacaccatg
gacagactcgacgccatcaaaaaggaactggacaaaatcagtgtggctcctggtgacggc
aacctcaacaacgccctgactgatgtggaccagtccatcaaggacctgttaaaaagcatt
cccactctgaacgataagatctccgaggtggagaacttgacctcacagttctcccagatt
aacaacataactggaaacatcaagaagataaaggagctcattgaacaagcccgagatgct
gctaacaggatttccatcccgatgaagttcagcggcgcgggtcacgtggagctgcatccg
cccaaaaatctggaggacctgaaggcatacacgtccatgtcgctgtcgctgcagaggccc
gaaggcaggggggacgggagccgccgccgccgccgcaggcagaaccagggcagtgccaac
atgtttgtcttgtacctcggcagcagagactcctctaagaactacctcggcatgatggtg
aggaataatgtgctgtacggcgtgtacaagctggatggacaggagtatgagatggagacg
ggtcccatcatctcgtctccatccgagcccgccaggttcgacagggtggacctgaacaga
atctatcaggatgcccagatgaccctcaccaaagacatcacctctggcaagtccatccca
cccatcgagggccgcaagcaaggcgaggggagcaagaacctcctggatctcagtcctagt
gacgttgtcttctacgtgggaggctaccctgccaacttcactcctccagcttctctcaat
taccccatgtacgagggctgcatcgagttcttctccattaacgacaaagccgtcagtctg
tacaacttccgagccaaggacaagatcaacttgcagactccttgcaaaagatatgtggct
ccagtgacgtccaactactacgagggaaccggatacagcaaagtgcttcttaaaaaaagg
aatccggccctggtcatcagcatggcgctccggtttcgttcagaaaacggcctgatcctg
tacctcggcagtgaggactattacttcaccgtgagtgtggagaagggcatcgtgttcatc
cgcagtaatctgctggacaaaccagccaccagtgaccagaagatcttcccaaaggaagac
tgggtggaggtccggatcatcagtgcattcccgggaaaaatgattgtccagttagccagt
aaagaagtcgtctcagcccaagcggcgtacaagaacgatgactttaaggaatcctatatt
ggcggtatcccagaagacctgaggacgagagacaacattaccatgcggccattcaaagga
tgcttgactaatctaaagaacgttgatgtcactgagcaagtgggcgtcagtaaaggctgt
cccgaacagtccctggtggtccggaaagcagagttcaacctgcagagctccctgtcggcc
gacctcaaaggcctcggcctggacaaagatgtcaccgtatccctgggattcaagagcacg
cagagccggggtctgctcctgcaggacaagcagccggctaacgggatgaatctacgattg
gaaaatggccacgtggttctccacttcaatgacaaaatgtggaaatcaaacaagcagtac
aatgacggccagtggcattacctgactgtgactaggagggctggaaggattgagctgctc
gtcgatgacgaagataaaggtcaggaggagagcggaacgtccgtccctgacaccggtggc
ctcctgtttctgggaaggaaccagttccagggctgcatgtccaacctctacacgaggcgg
cctgacaacctgtacaaggctgaggacttcagcaccttcgtgtcctctggagacgtgctg
ctggacgtgtgtgctgcagacagcccggctcagctcatgagggaccgcggcgctaaaaag
agatga
DBGET
integrated database retrieval system
