Takifugu rubripes (torafugu): 101071212
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Entry
101071212 CDS
T02386
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101071212 (npas1)
Transcription factors [BR:
tru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101071212 (npas1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
101071212
NCBI-ProteinID:
XP_029700111
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Position
11:complement(8835528..8863798)
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AA seq
798 aa
AA seq
DB search
MCVHIWILEQMAFFGLWQTEGGSLSVITRPISKGLQNLRKEKSRNAARSRRGKENFEFFE
LAKMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLMEGDSNCSKVRRSSHS
LATDMFEQHLGAHLLQSLDGFVFVVSHEGRFLYISETVSIYLGLSQVELTGSSVFDYIHP
ADHVEMAERLGIRPHLRAEAGCHTAPESASSSASTSSLSGTPEPAAPSSPHSTTDDCPDR
GFFIRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVVLAHTLPP
STLNEVRMESHMFVFRVNMDLQVIYCENRISEYMDLTPAEVIGHTCYHFIHVEDLENLRQ
SHEDLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRNEMAD
TPLDLLQLPESIRAERLRSSSSPTSSSPQTKGSGGKSDTDVKSRDKFLSAAVQSEDRRKR
QLRSDPEGAPAETRRRLEEIRHTEESVSVSSDQASDSEGEEEEETEWEQGGSGDRMKQED
GGAGGKLSRAADAPTRGDRVGRAHNGRAVIQHLKSVVAPSALPGSPGIKTEHDALTSGRW
APHTQTSQPQPSHAHTPSSSLNGDSPTTPIPDSTNEAPPKVLFTPPSPALSPAMSVSSPL
PRDERAVSGVVSRGGGGAGSGPDFELLQRLAAGSAAGRVLFHPLALSPQGPQSLYAPSTI
RYAPPELPPSHHHSAGHSDGLQLRSDHHKGPPPAFFPHLQRLAGLPPFSGFSPSDSPFSS
SLPFCMNGLRGAAGSEED
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttcacatatggattttggagcaaatggcatttttcggactgtggcagactgaa
ggagggagtttgtccgtaattaccaggccaatctctaaaggtctgcagaaccttcgtaaa
gagaagtcacgaaatgcagcacgttcaaggcgaggcaaagaaaatttcgagttctttgag
ttggccaagatgttacctctgcccggggccatcaccagccagttggacaaggcctcagtc
atccggctgaccatcagctacctgcacatgcgcactttcgccagccagggagacccaccc
tggagcccactgatggagggagacagcaactgcagcaaagtaagacgatcatctcattcg
ctggcgactgacatgtttgagcagcacctgggggcacatctcctgcagtctctagatggc
tttgtgttcgtggtcagtcacgagggacggttcctctacatctcagagacagtttcaatc
tacttgggcctctcacaggtggagctgaccggcagcagcgtgttcgactacatccacccg
gcggatcacgtggaaatggcagagcgactgggaatcaggcctcacttgagggccgaggcc
ggctgccacacggcccctgaaagcgcctccagttcggcttccacctcctccctgtctggt
actcctgaaccagcagctccctctagtcctcattccaccactgatgattgtcctgatcgt
ggcttcttcatccggatgaagtccacactcactaaaagaggcctgcatgtgaagtcgtcc
ggatacaaggtgatccacgtgacaggacggatccgctgccgccctgctctcgtcccaggt
tccacacgctccgtgcgccgaccgatgggtttagttgtgctggcacacacgctcccgcca
tccacacttaatgaggtccgcatggagagccatatgtttgttttcagagtgaacatggac
ctacaggtcatatattgtgagaacaggatctcagagtatatggatctcaccccagctgag
gtcattggacatacatgttaccacttcatccatgtagaagacctggaaaacctgcgccag
agccacgaggacttactgaggaaaggtcaagttgtgaccggatactatcgttggcttcag
agaagggggggctacctgtggatccagtctaccgccactgtctccataaaccacaaagcg
ccgcatgaacgcaacgtcatttgggtgaactatgtgttgagtcgaaacgaaatggccgac
actcctctggatctgctgcagctgccagagagcatcagggcagagaggctgcggagtagc
tcgtcacccaccagtagctccccgcagaccaaaggctcgggggggaagagtgacaccgat
gttaaaagcagggacaaattcctctccgccgccgtccaatcggaggaccggaggaagcgc
cagctgaggtccgatcctgaaggcgcgcccgctgaaacgcgccgccgtctggaggagatc
cgccacacggaggagagcgtgtcggtgtcctctgaccaggccagtgacagcgagggggag
gaggaggaggaaacggagtgggagcaggggggcagcggcgacaggatgaaacaagaggac
ggaggcgccggagggaaactgagcagggcggcagacgccccgactcgaggggatcgagtg
ggcagggcgcataatggccgggctgtgattcagcacctgaagagcgtggtcgcgccctcc
gccctgccggggagtcccggcattaagactgagcatgacgccctcaccagcgggcgctgg
gcgccacacacacagacctctcaaccccagccctcgcacgcgcacacgccctccagcagc
ctgaacggcgacagccccaccacacccatccccgactccactaatgaggcgcccccgaaa
gtcctgttcactcccccctctccggctttgtctcccgccatgtccgtgtcgtccccgctc
ccccgtgacgagcgggccgtgtcgggggtggtcagtcgcggcggcggcggcgcaggtagc
gggcccgactttgaactcctccagagactggctgccggcagcgcagcggggagggtcctc
ttccaccccctggccctcagcccccaaggtcctcagagcctctacgcccccagcactatc
cgctacgctccacctgagctgcccccctcccaccaccacagcgcaggacacagcgacggc
ctgcagctacgctcggaccaccacaagggcccccccccagccttcttccctcacctacag
cgcttggctggcctgccacccttcagcggtttctccccatccgacagccctttctcctcc
agcctgcccttctgtatgaacggactgaggggggccgcaggctcggaagaggactga
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