Takifugu rubripes (torafugu): 101071261
Help
Entry
101071261 CDS
T02386
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X4
KO
K22659
calsyntenin 1
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tru04515
]
101071261 (clstn1)
Cell adhesion molecules [BR:
tru04515
]
Cadherins
Cadherin related
101071261 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Toxin_R_bind_N
V_ATPase_I
EphA2_TM
Cadherin_C_2
Laminin_G_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
101071261
NCBI-ProteinID:
XP_003963169
Ensembl:
ENSTRUG00000010588
LinkDB
All DBs
Position
3:complement(8482017..8501994)
Genome browser
AA seq
955 aa
AA seq
DB search
MRFRGNTQCASAVGLLLGLLCAVEAAKVNKHKPWIETTYHGIITENDDKVLLDPPLIALD
KDAPLRYAGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKMDCELQKEHTFTIQAYDC
GEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKTYKATVLEGKKYDSILKVEAVDADCS
FQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLNYGKERMYKLTVTAYDCGKNRASEDVLV
KISVKPTCKPSWQGFSKRIEYEPGTGSLGLFPSMHLETCDEPITSIRASIELETNHIGKG
CDRDTYSEKSLHTLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVFEFNGTQAIKV
PEGMVNTNLKEPFTISVWMRHGPGAHEKETILCNSDKREMNRHHYSLYVHNCRLILLLRQ
DPSEAENYKPAEFHWKLDQACDKEWHHYVLNVEVPSVALFVDGTMFEPFLVTEDYPLHAS
KIETQLTIGACWQGGNARMAQFFRGNLAGLMIRSGKLENKKVIDCLYTCKEGLDVQLPEE
VAAAVKVEFNPSQSSLTVEGDDIDAFDKVMQHISYLNSRQFPTPGIRHLRISTTVKCFNG
ESCVAVPDVEGYVMVLQPEEPKISLSGIDHFARSAAEFESQEGVTLFPELRIVSTITREV
ETDPESEVAEGADDDPTVQETVVSEEIMHNLDTCEVTVVGDELDGEHESLELDMSQLQQR
GLVMGSSNLGLVITGVNSMANYEQLLHLIRYKNWHTEALFDRKFKLVCSELNGRYVSNDF
KVEVNVIHTANPVEHANNAMMQPNFINPVHHASVDLSGHNLVNAHQASVVPSAATIVIVV
CVSFLVFMIILGVFRIRAAHQRTMRDQESGKENEMDWDDSALTITVNPMETYEDQHSSEE
EEEEEEEESEDGEEEDDITSAESESSEDEEGAEPEDQQGASRQQQLEWDDSTLTY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgcgattccgagggaatacacagtgtgcctccgctgtgggactgctgctgggactatta
tgtgcggtggaagcagctaaagtcaataagcacaaaccctggatcgagacgacctaccat
gggatcatcacagaaaatgatgacaaagttcttctggacccccctctgatcgccctggac
aaagatgctcccctacgctacgcaggtgagatttgtggcttccggatccacggacaaaat
gtcccattcgaggcagtggtcctggacaagtccactggagagggagtcatccgggccaaa
gacaagatggactgcgagctgcagaaggagcacacgttcaccatccaggcatacgactgt
ggagagggtcccgatggcgccaacatgaagaaatctcacaaggctactgttcacatccag
gtgaacgatatcaacgagtactcgccggtgttcaaggagaaaacctacaaagccaccgtc
ctcgaggggaagaagtacgacagcatcctgaaagtggaggccgtggacgccgactgctcc
ttccagttcagccaaatctgcaactatgagatcgtcacgcctgacgtgcccttcacggtt
gacaaagacggcttcatcaaaaacacagagaagctaaactatggcaaagagcgcatgtac
aagctcactgtgactgcttatgactgcgggaagaaccgagcctctgaagatgttctggtc
aagatcagcgtcaagcccacctgcaagcccagctggcaaggattcagcaagaggattgaa
tatgagcccggcacaggtagccttggccttttccccagcatgcacttggagacatgtgac
gagccgatcacatccatccgggccagtattgagctggaaaccaaccatattgggaaagga
tgcgatcgtgacacatactctgagaaatctctgcacactctctgtggagccagttctggc
actgtagagcttctgcctgcgcccagcagctctgccaactggactgtcggactgcccaca
gacaacggacacgacagtgaccaggtctttgagttcaacggtacccaggctatcaaggtt
cctgagggcatggtgaacaccaacctgaaggagccctttaccatctctgtgtggatgaga
cacggccctggtgcccatgagaaggagaccatcctctgcaactccgataagagagagatg
aacagacaccactactcgctttacgtgcacaactgcaggctgatcctcctcctccgccag
gatccgtcggaagctgagaactacaaaccggctgagttccactggaaactggaccaggca
tgtgacaaagagtggcatcactacgtgttgaacgtcgaggtccccagcgtggcgctcttt
gtggatggaactatgttcgagccattcctggttacagaggactacccactgcacgcctcc
aaaatcgaaactcaactcaccatcggtgcctgctggcagggtggaaatgcgcgaatggct
cagtttttccggggaaacctggcagggctaatgatccgctccggcaagctagagaacaag
aaggtgatcgactgcttgtatacgtgtaaggaaggactggacgtacagctgcctgaggag
gtcgcggcagctgtcaaggtggagtttaatcccagccagtcctctctgactgttgaaggc
gatgacatcgatgccttcgataaagtcatgcagcacatctcttacctaaactcgcgccag
tttccaacccccggcatcaggcaccttcgtatctccaccactgtcaaatgtttcaatggc
gagtcgtgcgtggccgtgcctgacgtggaaggctacgtgatggtgctgcagccagaggag
cccaagatcagcctcagcggcatcgaccacttcgcccgcagcgctgcagaatttgagagc
caggaaggcgtgacgctattccccgagctacgcatcgtgagcaccatcacccgcgaggtg
gagacagaccccgagtctgaagtagctgagggagcagatgatgaccccacagtccaagag
acagtggtgtcggaggagatcatgcacaatctggatacttgtgaagtcacggtcgtggga
gacgagctggacggggagcacgagagcctggagctggacatgtcccagctgcaacagcgt
ggcctggtgatgggctcctctaacctgggcctggtcatcaccggggtgaactccatggcc
aactatgagcagctcctgcatcttatccgttacaaaaactggcacacagaggctctgttt
gacaggaaattcaaactggtctgctcggagctcaacggtcgatatgtcagcaatgatttc
aaggtggaggtgaatgttattcacacggccaatcctgtggagcacgccaacaacgccatg
atgcagcccaacttcattaaccctgtgcaccacgcctctgtggacctgtctggtcacaac
ctggtcaatgctcaccaggcctcagtggttcccagtgctgccaccattgtcatcgtggtg
tgcgtgagcttcctggtgttcatgatcatcctgggggtcttccgcatccgagccgcacac
cagcgcaccatgagggaccaggagagcggcaaagagaacgagatggactgggacgactcg
gccctgaccatcaccgtcaatcccatggagacatacgaggaccagcacagcagcgaggag
gaggaggaggaggaagaggaggagagcgaggacggagaggaggaagatgacattacaagc
gctgagtcagagagcagcgaggatgaggagggcgccgagccagaggaccagcagggggcc
agcagacagcagcagctggagtgggacgactccaccctcacctactag
DBGET
integrated database retrieval system
