Takifugu rubripes (torafugu): 101071297
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Entry
101071297 CDS
T02386
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
101071297 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101071297 (sh3rf1)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101071297 (sh3rf1)
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101071297 (sh3rf1)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101071297 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
101071297
NCBI-ProteinID:
XP_003973971
Ensembl:
ENSTRUG00000014310
LinkDB
All DBs
Position
20:4477820..4499406
Genome browser
AA seq
862 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRKAGPGAGVCTNGTSGAVARSHNSGTRDQGTPGTQPQRTQ
AKSTLVRGIPQLPCAKALYNYDGKEPGDLKFSKGDIVILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNTAARQLIELDKPSDSNGDSGEGASSGPLSNGAQRVGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSDSSYSSIPVDALPPPPPPPPQSSVDGAAYSLAAGQRPSA
SISDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTPPGSSQAKVHMSSCTPAGRGITIVSPSSATIVPCPEFSKPLTCCSSGVS
AVSQPAAVVTAPQTATGQQPKVPVHVNSQMTVNQARNAVRTAVCHSQDRPTAAVTPILSA
ATVAYLPHLAVCSQTSPSPGQGCTRAGVAMGCAAASLTPPNVSAASLEGDALRPVPLLTV
GSVNSSASNSTALACRLDKDNKKEKKSLLKLLSNKKKSRSSPPSSPTPDAEQAAAAAGGG
VGVGEALQGAAAPDASPPSGSVSCLEPEPAAVAPSASSSQCSSSALESSHRRSNPLDGCA
PIAPPPRQPCSSLLSQHQDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGW
FKGTLQRNGRTGLFPGSFVDII
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatctgtactgttggacttgctcgagtgccccgtgtgtctcgagcggctggac
gcctcggcaaaagtgctcccctgtcagcacaccttttgtcgccgctgtctccaaggcatc
ctcggctcgcgcggggagctgcgctgcccggagtgccgcacgctggtggagtgtgccgtg
gacgaactccccagcaacatcctcctcgtgcgcctcttggatggcatcaagcaacgacct
cgaaaggctggacctggagcgggagtctgcacgaacggtacttctggcgctgtggccaga
tcgcacaacagtgggaccagagaccaaggcacccccggaacacagccccagagaacccag
gcaaagagcaccctcgtccggggtataccccagctcccgtgtgccaaggccctctacaac
tatgatggcaaagaaccaggagacctcaagtttagcaagggcgacatcgtcatcctgcgc
cggcaggtggatgagaactggtaccacggggagatgggtggagttcacggctttttcccc
accaacttcgtgcaggtcatcaagcccctgccgcagcccccgcctcagtgcaaagcttta
tatgactttgagctcaaagacaaggaggcggacaaggactgtctccccttctccaaggac
gatatcctcactgtgatccgcagagtcgatgaaaattgggcagagggaatgctgggagac
aaaattggaattttccctatttcatatgttgagttcaacacagcagctcgtcagcttata
gagttggacaagccgtcagactccaacggagactctggagagggggcctcctcagggccc
ctgagcaacggtgctcagcgggtaggggagaaaaagaacagcaagaagcgacattctttt
acctctctcaccatgtcccacaaacccatgctagctcctccccctcagcgccactccatg
gaaatcagcgggccagtcctcatcagttccagcaaccccacagcagccgcacgaatcgga
gagatcagtgggggcctttcctgtagcgcaccttcacaggtacacatttgcacgactgga
ctaatcgtcaccccgccccctagtagtcctgttactacagcaacagtcttcacatttccg
tctgactcgagctactcatctatccctgtggatgcgctcccgccgcccccgcctcctcca
ccacagtcatccgtagacggggcagcgtattcattagctgctggacagagaccctccgcc
agcataagtgaccaaagtgggagacaaaggcccaccgtgtatgtggccatgtttccatac
actccccgtaaggaggacgagctggaactgaggaagggggagatgtttctggttttggag
cgctgtcaggacggctggttcaaaggcacctccatgcacactggcaagatcggggtcttc
cctggaaactatatgagccccgtcagcaggacgccgccagggagcagccaggcaaaggtg
cacatgagctcgtgcacgccagctggcagaggtatcaccattgtcagcccctcgtctgcc
accattgttccctgtccagagttcagcaaaccgctcacgtgctgctccagcggtgtatct
gcggtctcccagcctgctgccgtggtaaccgcacctcagacggctacaggtcaacagccc
aaagtccctgtgcacgtcaactcacagatgactgtgaaccaagctcgcaatgcagtcagg
acagctgtgtgtcacagtcaggaccggcccacggcagcagtgacccccatcctgtctgca
gctacagtcgcctacctgccacacctggcagtgtgctcacagacttcccccagtccggga
caaggctgcacccgggcgggagtggcaatgggctgcgccgctgcctcgctcaccccaccc
aacgtcagcgctgcttctttggagggcgacgctctgagacccgtgccgctcctgactgtc
ggctctgtcaacagctccgcgtccaacagcaccgctctggcctgcagacttgacaaggac
aacaagaaagagaagaagagtcttctgaagctgttgtccaataagaagaagtctcgctct
tcgccgccctcctctcccaccccggacgcagaacaagctgctgctgctgctggtggtggt
gttggtgttggtgaggcgcttcagggcgcagcggcccccgacgcctccccgccctccggc
tccgttagctgcctcgagccggagcctgctgccgttgccccttctgcctcttcgtcccag
tgctcctcctcagccctggagtcctctcatcggaggagcaaccccctcgatggatgcgct
cccatcgctcctcctccacgccagccctgctcctctctcctgtctcagcaccaggacgca
cggcccattatatgtgaaaggtaccgggtggtggtgtcgtatcctccccagagcgaagca
gagctggagctgaaggagggagacattgtgtttgtgcacagaaagagagaggacggctgg
ttcaaaggcacgctgcagaggaacggcaggaccggtctgttccccggcagctttgtagac
atcatctaa
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