Takifugu rubripes (torafugu): 101071811
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Entry
101071811 CDS
T02386
Name
(RefSeq) spermatogenesis-associated protein 13-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101071811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101071811
Membrane trafficking [BR:
tru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101071811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
101071811
NCBI-ProteinID:
XP_011606190
Ensembl:
ENSTRUG00000007318
UniProt:
H2T077
LinkDB
All DBs
Position
10:6509492..6521238
Genome browser
AA seq
1252 aa
AA seq
DB search
MSKEEERDGVLSTSEDPLPRLHAPRADAPIRSRPLSDSYPFYSQAERSGPTYLLSGCGAQ
VQPITTCPDENGFNGISSSAWSSPVIGQPDGKPSRIMKLFSNSKKGPAAAPSSAAEQASW
AGLSGLGVIDSFKKLRSSVLQGIQSKGANIGDGEAFSSGAGVSHGANNHVPEGCSVSNGN
TAHQSMGMSLCDSDMEDYYDDGDDEEGNADGLTRNTVFSRSIRRAYGAGRISLFDTGNGK
PMEKSTSATAYGQKPTQATNVNPQQEKTNETSNVKVLSRLSKSAENLQIFKAPFRRKAQA
SGLSVPDEELLQRPVKAQRATNIQRTASASSVDLQDNALSNRKNPVKPKGPMLKLVGSVT
DLTVRRRSTSTPSPTSPSLMSPLSRLHDDYSRRASCLTTSERQQRPSPVRACALSVGHAP
LVHSQPTGDANQEHQEVFIPVFLDPSETNGSTSPGTSGLNESPTEAPNPEEECDLSALSQ
KESPQEPADMTNLPVMESSEQQVKKALLEVEDVSPTSSSTPTGSPTCVSEPPSPPPPADE
AQTSSAEAVPVKPRQRSGRQRPRPISDYGQLISRTHSIPEEVAQQHAKDGTSDALLQKDC
VGGSSCEAHGNCDSINGDVRNRRHRPLSVIGGLDVYPPNAEDKDEHLSSPLSRPPIPSHQ
VPPYKAVSARFRPSTFSQSTPIGLDRVGRRKLHRVLSGGMAECSMALDDSVSEEEEEGSF
DELTDVTPYLQPGVELSVLNEWISSGRAVHAEALWDHVTMEEQELAFKAGDVIRVVDASH
TDWWWGRGGDREAWFPSSFVRVRVNQEDSGAESTESVAGQEAQSSRETHNLQHREQMRTN
VVQEIMNTERIYIKHLKDICDGYIRQCRKHPDMFTELQLKTIFSNIEDIYKFQRQFLRDL
EKNYNKEEPHLSEIGACFLLQGEGFSIYSDYCNNHPAACVELQRFMKLGKFKHFFEACRL
LQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYTGVSEAYEAMKNVASLINE
RKRRLESIDTIAHWQVAILHWEGSNVLERSSELIHSGELTRIVRQGKMQQRSFFLFDHQL
IYCKKDVLRRDLLHYRGRMDTDQTEVLDVPDGRDQDLGLTLKNALRLRNASTLEFMCVLC
CRKAEDKQRWLQAFARERQRVKEDQEMGMEISEEQRKQAIANARRVKQGKSNSIGYSGSV
PPHHQNLHPLHQRHITIPTSVPQQQVFSLAEPPKRKPYHLLYSITRNAFFRK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaagaagagagggatggggtcttgtccaccagtgaagatcccctcccgcgc
ctccacgcccccagagctgacgcacccatccgaagccgacccctcagtgattcatacccg
ttttacagccaagctgagagaagcgggcccacgtatctgctgtctgggtgtggcgcccaa
gtgcagcccataaccacgtgtccagatgaaaatggattcaacggcatcagctcttccgct
tggtccagccccgtcataggccagcctgacggaaagccttccagaattatgaagcttttt
tcaaattcaaagaaaggacctgctgctgctccgagttcagccgccgagcaggcctcctgg
gcggggctctcagggctgggggtcattgactctttcaaaaagctgcgatcttctgtgctc
caaggtatacagagcaaaggggccaacatcggtgatggagaggccttctcttctggtgct
ggtgttagccatggagcaaataatcatgtcccagagggatgcagtgtgtctaatggaaat
actgctcaccaaagtatggggatgagcctgtgtgactcagatatggaggactattacgat
gacggcgatgatgaagaaggtaatgcagatggcctcacgcgcaacacggtgttctccagg
agtatcaggagagcgtacggagcgggccgtatctctttatttgatacggggaatgggaaa
ccgatggaaaaaagcacaagtgcgacggcttacggacagaaaccaacccaggcaaccaat
gtgaacccacagcaggagaaaacaaatgagacctccaatgtgaaggtgctgagcagactg
agcaaaagcgctgaaaaccttcagatttttaaggcaccgttcagacgcaaagctcaagct
tcagggctttctgttcctgacgaagagctcctccagaggcctgtaaaggcacagagggct
acaaacattcagaggacagccagcgcttcctcagtagacctccaggataatgctctgagt
aacaggaagaaccctgtgaagcccaaggggccaatgctaaagctagtaggcagcgtcaca
gacctgactgttcgccggaggtcgacttccaccccgagccccacatctccatctctgatg
tctcctctgagccgcctccatgacgactactcccgacgggcgtcttgcctgacaaccagc
gagcgacagcagaggccctcacccgtcagagcttgtgccctgtctgtcggacacgcccct
ctggtccattcacagcctacaggcgacgccaaccaggagcaccaggaggtctttatcccg
gtatttttggacccttcagagacaaatgggtcgacctcacctggtacctctggtctcaat
gaatcaccaaccgaagccccaaaccctgaagaagaatgtgatttatctgccctgagccag
aaagagtccccacaagaaccagctgatatgaccaatttaccagttatggaatcatctgag
cagcaagtgaaaaaagctcttctagaagtggaagatgtctccccaacaagcagcagtacc
cccacaggctccccaacatgcgtctcagaacctccttcacctcctccccctgctgacgaa
gcccaaacgtcttctgcggaagctgttccggtcaagcccaggcaacggagcgggcgccaa
aggcctcggcccatttctgattacggacagctcatttccaggacccactccattcccgag
gaagtggcgcagcagcatgctaaagacgggacgtcggatgcactcctgcagaaagactgc
gtcggcggcagctcctgcgaggctcacgggaactgcgacagcatcaacggggacgtccgg
aacaggaggcatcgaccgctgtctgtgatcggaggattggatgtttaccccccgaatgct
gaggataaggatgagcatctctcttcccctctgtcgcggcctcccatcccctcccaccag
gtgcccccctacaaggcggtgtcggccagatttcgcccctccacgttctcccagagcacc
cccatcggtctggatcgagtcgggcggcgaaagctgcacagagtgctcagcggtggtatg
gctgagtgttccatggcgctggacgacagcgtgagtgaagaggaggaggagggcagcttc
gacgagctcacagatgtcacaccctaccttcagcccggggtggaactctccgtgctcaat
gagtggataagctctggacgcgcggtgcacgccgaggcgctctgggaccatgtaaccatg
gaggagcaggagctggcgttcaaagctggcgatgttatccgtgtggttgatgcttcacac
acagactggtggtggggcagggggggcgacagagaggcctggttcccctccagctttgtc
agggtgcgagtgaaccaggaggactcgggggcagagagcacagagagtgtagcgggccag
gaggcgcaaagctccagggagactcacaaccttcagcacagggaacagatgagaaccaat
gtggttcaggaaatcatgaacactgaacgcatctacatcaaacacctgaaggacatctgt
gatggttacatccgccagtgccgcaaacacccggacatgttcaccgagctgcagctgaag
accatcttcagcaacatagaagatatctacaagtttcagaggcagtttctcagagacctg
gagaagaattacaacaaagaggagccacatctcagcgagataggagcttgctttctactg
cagggagaagggttttctatctactcggactactgtaacaatcatccagctgcttgtgtg
gagctgcagcgcttcatgaagctgggcaaatttaagcatttctttgaggcctgccgtctc
ctccagcagatgattgacatttcaattgctggttttttgctcaccccagtccagaaaatc
tgtaaataccccctgcagctaggagaactgctgaaatacacccccaaagaccacagtgac
tacactggagtaagcgaagcatatgaagccatgaagaatgtagcgagtcttataaatgag
aggaagcgaaggctggagagcattgacaccatcgctcactggcaggttgccattctgcac
tgggagggcagcaatgtgctggagcgcagctcagagctgatccactctggcgagctgacc
cggatcgtccgacaaggcaaaatgcaacagcgcagcttcttcctcttcgaccaccagcta
atatactgcaagaaagacgtcctgcgccgcgaccttctccactaccgcggacggatggac
acggaccagacagaagtgctggacgtgcctgacggacgggaccaggacctgggcctgacc
ctaaagaacgccctgcgtctgcgtaacgcctccactctggagtttatgtgtgtgctgtgc
tgcagaaaagccgaggacaagcagaggtggctgcaggcgtttgctagggagagacagaga
gtcaaggaagaccaggagatgggaatggaaatcagcgaggaacaaagaaaacaggctatt
gctaatgccagacgggtcaaacaagggaagagcaacagcattggctactctggttctgtc
ccaccacatcaccaaaaccttcacccacttcaccagcgtcacatcaccatcccaaccagc
gtgcctcagcagcaggtgttttcattggctgagcctcccaagcggaaaccctatcacctg
ctgtacagcatcacccggaacgcctttttcaggaaatga
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