Takifugu rubripes (torafugu): 101071906
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Entry
101071906 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101071906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101071906
03036 Chromosome and associated proteins [BR:
tru03036
]
101071906
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101071906
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101071906
Chromatin remodeling factors
BAF complex
101071906
PBAF complex
101071906
GBAF(ncBAF) complex
101071906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101071906
NCBI-ProteinID:
XP_029707104
Ensembl:
ENSTRUG00000001378
LinkDB
All DBs
Position
17:complement(16699576..16713129)
Genome browser
AA seq
1650 aa
AA seq
DB search
MSTPDPPIGGTPRPGPSPGPGPSPGAMMGPSPGPSPGSSHSMMGPSPGPPSTGHPQPGPS
GYGQENMHPLHKPIESMHEKSMSEESRFSQLKGLTVRQAGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSSGPPSGPLMPSSSSSTSSSGGPGSATTPLDGPSGDQHTLGPNSRPGP
PVSAGPGPSPGPNLGPSLGSGLDPAGGTGPTPFNQNQLHQLRAQIMAYKMLTRGQPLPDH
LQMAVQGKRPMPGMQQQPIPSLGPGAGGGPVGGVLGPGLGPIGSGYSRAHGMMGPNMPPP
GPSGAPVGIQGQNQNGPPKSWPEGPMVNAAAPSNTPQKLIPPQPTGRPSPAPPSVPPAAS
PVMPPQTQSPGQPVQPTPMMPYHTKQNRITPIQKPCGLDPVEILQEREYRLQARITHRIA
ELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKAYKRSK
RQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKMQKLTKA
VATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVAN
LTELVRAHKAAQALKEKKKKKKKKKKLEVAEGQAPAMGPDGEPLDETSQMSDLPVKVIHV
DSGNILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEPQPSSASMED
KKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYAVAHAVTEKVEKQST
LLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYL
IIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDK
QVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNF
LLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQ
LPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICN
HPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTS
LMTIMEDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNDPESEYFIFLLSTRAGGLGLNLQS
ADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVSSVEEKILAAAKYKLNVDQK
VIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARSEEEFDQFMRMD
LDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYS
DSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRRRDRDLDLPGPSSSLGGRGRGDRDDDG
KRQRKRGRPPVEKLSPNPPSLTKKMKKIVDAVIKYKDSASGRQLSEVFIQLPSRKELPEY
YELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYEDSIVLQSVF
TSLRQKIEKEEESEGEDSEEEEEELEEGSESESRSVKVKIRLGRKDKGSDRGKARSRRTG
RSRAKPVVSDDDSEDEQEEEHSPSATDEES
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaccagatcctcctataggagggacccctcgcccaggtccttcacctggtcct
ggtccctcacccggtgcaatgatgggtcccagtcctgggccatccccaggttcttcccac
agtatgatgggccccagtcctggccctccatccaccgggcacccccagccaggaccctcc
ggttatggccaggagaacatgcacccgctgcacaaacccatagagagcatgcacgagaag
agcatgagcgaggagagccgcttcagccagctgaagggtctgacagtgaggcaggctggt
cacagcggcatgggccctccacccagccctctggaccaacactcacaaggttaccactcc
ccattggggggctctgaccattccagtcctgttccttccagtggtcctccttctggtcct
cttatgccgtcctcctcttcttccacctcctcctccgggggccccggctctgccactaca
cctttagatggccccagtggagatcaacacacactgggccccaatagcaggcctggccct
ccagtgagcgctggcccaggacccagtcctggacccaatctaggcccaagccttggatct
ggccttgaccctgcgggtggaactggccctactccctttaatcaaaaccagctccaccaa
cttagagcacaaattatggcttacaaaatgctgaccaggggacagcctctgccagatcac
ctccagatggccgtccagggcaagaggcccatgcctgggatgcagcagcagccaattccc
agcctgggccctggtgctggaggtggaccagtgggtggggtactaggaccggggcttgga
ccaataggctcaggctacagtcgagcacatggtatgatgggccccaacatgcctcctcca
ggcccttcaggtgctccagttgggatacagggacaaaaccaaaatggacctcccaagtcc
tggcctgaaggccccatggtgaacgcggcagccccctccaacacaccgcaaaagctcatt
cctcctcagcccactggacgaccttctcccgccccgccgtctgttccccctgccgcctcc
cctgtgatgcctccacagacccagtcccccggtcaaccggtgcagccaacgcccatgatg
ccttaccacaccaagcagaaccgcattacccccatccagaagccctgcggcctcgaccca
gtggagatcctgcaggagagggagtacaggctacaggctcgcatcactcaccgcatcgct
gaactggagaatctacccggatctctggctggagacctgcgcaccaaagccaccatagag
ctcaaagccctccgactactcaacttccagagacaattacgacaagaggtggtggtttgc
atgcgccgcgacacggctctggagaccgctctcgacgccaaggcctacaagcggagcaag
cgccagtctttgcgagaggcccgcatcacggagaagctggagaagcagcagaagatcgag
caggagcgcaaacgcaggcagaaacatcaggagtacctcaacagcatcctgcagcacgcc
aaagatttcaaagagtaccaccggtccatcactggcaaaatgcagaagctgaccaaagcc
gtggccacatatcacgccaatactgagcgggagcagaagaaggaaaatgagcgcattgag
aaagagaggatgaggaggctgatggctgaagatgaggagggctatcggaaactcatcgac
cagaagaaggacaagcgcctggcgtacctgctgcagcagaccgacgagtacgtcgccaac
ctcacggagctggtcagagctcataaggctgcgcaggctctcaaggagaagaagaaaaag
aagaagaaaaagaagaaattggaggtggcagagggtcaggctcctgccatgggtcctgat
ggagagcctctggatgagaccagtcagatgagtgacctgcccgtgaaagtcatccatgtc
gacagtggaaacattctgaccggggtcgacgctccaaaagccggacagctggacacgtgg
ttggagatgaaccctggttatgaggtggctccccgttcggacagtgaggacagcgaggaa
gaggaagaggaggaggaggaggaggaggagccccaaccatcttctgctagcatggaggac
aagaagaagatcacagaccccgacagtgaggatgtgtcagaggtggacgtgcggcacatc
attgaaaatgctaaacaggatgtggatgatgagtatagtggtgcggcttttgcccggggg
ctccagtcttattacgctgtggctcacgccgtcacagaaaaggtggagaagcagtccacg
ttgttggtgaatgggcagctcaaacagtatcagattaaaggcctggagtggctggtttcc
ctttacaacaacaacctgaacgggatcctggcagacgagatgggcctgggaaaaaccatt
caaaccattgctcttatcacgtacctcatggagcacaaacggctcaacggaccctacctc
attatcgtacccctgtcaactctttctaactgggtgtatgagttcgacaaatgggcgccg
acagtcgtgaaagtgtcctacaaggggtctcctgctgctagaagagcctttgttccacaa
ctgcgcagtggaaagtttaacgttttactcaccacttacgagtacatcatcaaggataag
caagtgctggccaagattcgctggaagtacatgatcgtggatgaaggccaccgtatgaag
aaccaccactgtaagctgacgcaggttctgaacacccactatctggctcctcgccgagtc
ctcctgacgggaacgccactgcagaacaaactcccggagctctgggcactgctgaacttc
ctcctgcccaccattttcaagagctgcagcacattcgagcagtggttcaacgcccctttc
gccatgactggagaaaaggtggacctcaatgaagaggagaccatcttgattatccgtcgt
ctccacaaggtgctccgccctttcctgctacgcagattaaagaaggaagtggaggcacag
cttccagagaaggtggaatatgtgatcaagtgtgatatgtcagctctgcagagggtgttg
tacaggcacatgcaggccaagggggttctgctgactgacggctcagagaaggataagaag
ggtaaaggaggcacaaagactttgatgaacaccatcatgcagctgaggaagatctgcaac
catccttacatgttccaacaaatagaggaatccttctctgaacatttgggattttctggt
ggaatagtccagggtcctgacctgtaccgggcatcgggaaagtttgaggtgctggatcga
attctcccaaagctgagagcaacaaaccacaaagtgctgcttttctgtcagatgacctcg
ctcatgacaattatggaggactacttcgcttaccgcagcttcaagtatctgcgcctggat
ggcacgaccaaggctgaggatcgaggaatgttgctgaagacattcaatgacccagagtca
gagtactttattttcctcctgagcacaagggctggaggcctcggcctcaatctgcagtct
gccgacactgtggtgatttttgactccgactggaatccacatcaggaccttcaagcccag
gacagagcccatcgcatcggtcaacagaatgaggtacgcgtgctccgtctttgtactgtc
agcagcgtggaggagaagatcttggccgctgccaaatacaaactgaatgtggaccagaag
gtcatccaggctggaatgtttgaccagaagtcttccagccatgagcgcagggccttctta
caggccatcctggaacacgaggagcaagacgaggaggaggacgaagtgcccgatgacgag
acggtcaaccagatgatcgccagaagtgaggaagagttcgatcagttcatgcgtatggac
ctggaccggcgccgcgaggaagcccgtaacccgcgccgtaaaccacgtctgatggaggag
gacgagctgcccacttggatcatgaaggacgacgccgaggttgagcgactgacctgcgag
gaggaggaggagaaaatgttcggccgaggttctcggcagaggaaagaggtggactacagc
gattcgctgactgagaaacagtggctgaaggccatcgaggagggcactctggaagaggtg
gaggaagaggtacgtcacaagaagaccacccgcaagaggaggagggaccgcgacctggac
ctccctggtccatcttcgtctttgggagggcggggaagaggggacagagatgatgatggg
aagaggcagagaaagagggggcggccacctgtggagaagctctccccaaaccctccctcc
ctcacaaagaagatgaagaaaattgtggatgccgtcatcaagtataaggacagcgctagc
gggcgtcagctgagtgaggtgttcatccagctgccctctcggaaagaacttccagagtac
tacgagttaatccgaaagcctgtagactttaggaaaattaaggagaggattcggggtcat
cgttaccgcagtctgggtgacctggaaagagatgtcatgttgctctttcaaaatgctcaa
accttcaacctggagggctcgctgatctacgaagactccatcgtcctgcagtcggtcttc
accagtctgcggcagaagatcgagaaagaggaggagagcgagggagaggacagcgaggaa
gaggaggaagagctggaggaaggatccgagtctgaatctcgctctgtgaaagtgaagatt
cgtctgggcaggaaggacaaaggcagcgatcgagggaaggcacgcagccggcggaccggc
cgcagcagagccaaacccgttgtgagcgacgacgactcggaggacgaacaggaagaggag
cattcccccagtgccactgacgaagagtcctga
DBGET
integrated database retrieval system
