Takifugu rubripes (torafugu): 101072098
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Entry
101072098 CDS
T02386
Symbol
srf
Name
(RefSeq) serum response factor isoform X2
KO
K04378
serum response factor
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101072098 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101072098 (srf)
Transcription factors [BR:
tru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
101072098 (srf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
101072098
NCBI-ProteinID:
XP_003963742
Ensembl:
ENSTRUG00000017531
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Position
4:complement(4021763..4042755)
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AA seq
540 aa
AA seq
DB search
MLPSRIGSAPSGNGSVSHRSIAAQNSGVVDSGIRPVLIRTGQSLPGVSESIGSAVRLGER
DAAGMLGANGPGGPRGGRPGVTSLQSAIQGNTMGLNTGVVLGHGARFDTDRESAPLCSGS
DNDSDSGDDDDPVGSLGYNRRGVKREREMEASVTGQEVGVPPGGYSMVPGGVVGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRTDPSMDQRMSATGFEETDLTYQVSESESMGDT
KDSLKPTFTVANLPGTTNSAQSTVSTTSTAMQVTSGPSFPITNYLAPVLTGSNVSANGTV
LKTAGTSTGVMQLPGGFTFMPGTGVPQQIQAIQVHPNTTNSNSSPETSHTSTNSTASASL
PTIVTSSVPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQATPTMQVSHTQAQDT
GAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSSSSSSSNLTELQVVNLDTVAQSLKSD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccggattggatcggcaccatctggaaacggatcagtgtcacacagaagc
atcgcagcgcagaattcaggagtggttgacagcgggatccgtcctgttttgatcagaacg
gggcaaagtttaccgggggttagcgagagcatcgggtctgccgtacgactgggagaaaga
gacgctgctgggatgttgggagccaatggtccagggggtccgagaggtggaagaccagga
gtgacatcgctccagagtgcgatccagggtaatacgatggggttgaacaccggagttgtg
ttgggtcacggagcgaggttcgacacagaccgggaaagtgctcctctgtgcagcggctct
gacaatgactcggattctggagacgatgacgacccggtaggttcactcgggtacaacagg
agaggggtgaagcgggagcgagagatggaagcttcggtgaccggacaggaggtgggtgtg
cctcccggaggttacagtatggtgcccggaggcgtcgtaggggcgaagccagggaagaaa
acacgtgggcgcgtaaagataaagatggaatttattgacaacaagttgagacgttacacc
acattcagcaagaggaaaacaggtatcatgaaaaaggcatatgaactttccaccttgact
ggaacccaggtcctgctgttggtggccagtgaaacaggccacgtgtacacttttgcaacc
cgcaaactccagcccatgatcacaagtgaaacgggcaaagccttgatccagacatgcctg
aactcaccagactcgccaccacgcaccgacccctccatggaccagcgtatgagtgccaca
ggattcgaggagacggatctcacttaccaggtgtctgagtcagagagcatgggtgacaca
aaggactcgctgaagccgacatttaccgtagccaatctaccaggcaccaccaacagcgct
cagtccacagtatccaccacctccaccgccatgcaagtgaccagcggaccatcatttccc
atcacaaactacctggcacccgtcctgactggcagcaacgtcagcgccaacggcactgtc
ctcaagactgctgggacgtccacgggggtcatgcagctgcctggcggctttactttcatg
ccaggaacaggggttccccagcagattcaggccatccaggtccaccccaacaccacaaat
agtaacagcagccctgagacctctcacacctccaccaactccactgcatcagctagtctc
ccaaccatcgtcacctcatcggtgccaacgtctgtagcaggtcacatgatgtatcccagc
cctcacacagtaatgtatgcctccacgccagcgctggctgatggggggctggcagtgctc
aacgccttctcccaggccacccccacaatgcaagtttcacacacacaggcccaggacaca
ggtgctgtccctcaggtgttcctcacagcacctccaggcacggtacagatcccagtctca
gcggtgcagctacatccaatggtgattggccagcaatccagcagcagcagcagcagtagt
aaccttacggagctccaggtggtcaaccttgacacagtggcacagagtttgaagagcgac
tga
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