Takifugu rubripes (torafugu): 101072289
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Entry
101072289 CDS
T02386
Symbol
pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B isoform X2
KO
K17386
platelet-derived growth factor subunit B
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04010
MAPK signaling pathway
tru04020
Calcium signaling pathway
tru04510
Focal adhesion
tru04540
Gap junction
tru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101072289 (pdgfb)
04020 Calcium signaling pathway
101072289 (pdgfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101072289 (pdgfb)
04540 Gap junction
101072289 (pdgfb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101072289 (pdgfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tru04052
]
101072289 (pdgfb)
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101072289 (pdgfb)
Cytokines and neuropeptides [BR:
tru04052
]
Cytokines
Growth factors (RTK binding)
101072289 (pdgfb)
Glycosaminoglycan binding proteins [BR:
tru00536
]
Heparan sulfate / Heparin
Growth factors/receptors
101072289 (pdgfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
101072289
NCBI-ProteinID:
XP_003976863
Ensembl:
ENSTRUG00000022420
LinkDB
All DBs
Position
17:10421072..10432104
Genome browser
AA seq
542 aa
AA seq
DB search
MRSWVLLLLSAALLRLGNAEGDPLPPSLVDLVRNSPISSVDDLKLLLQQEANAIEEEDEH
DTPADHTHGRYARSLVAAQPAQQAICKVRTEVMEVKRSMLDRRNADFILWPPCVEVQRCS
GCCNNRLMKCVPIVTSSRNLQVIKIQYVNMKPKYEQAIITVEDHVTCRCQSCTSSSSSLP
SSSDSNTHSCQSNPLPASPQQPPPSLSHSQALPRSVQPGSQKTLTSKADLHRHDDLKHNQ
QEQPVAKQVQRGSYTHWTQPRLHQSPAHMQPGVYQHTAAGPALVNSQPPETRTQHGVMKS
TQQVVHGSGYDGKEESSVNGTKSSGEMRHPDHMQRQQELLQHQQRQQLHYPQQTTEDQVL
RTQSHLNAPQSDSASPPVSPTQPLRVEQTPAAPTMAYQKDSVSSGKYVEVTHPREPEAVT
TAQKERKDREESGSSSSGDTARVELASQVKDRDSKISSGSGHLTEEERKQKIVETVQREL
DKESHLHPHPPQQRPRPTFKSALPTVAPRPSSRRSPFRPASPRRRRKHRKRISKEAMRAM
IM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctgctgctgctctcagcggcccttctgcggctcggaaacgctgag
ggtgatccgctccctccgtcgctggtcgacctggtgaggaactctcctatctcctcagtg
gacgatctgaagctgctgctgcagcaagaagccaatgcaatagaagaagaagatgagcat
gatacccctgcagaccacacccacggccgatatgccagaagtcttgtggcggcgcaacca
gcccaacaagccatctgtaaagtacggacggaggtgatggaggtcaagagatctatgttg
gaccgccgtaatgctgacttcatattatggccgccctgcgtggaggtgcagcggtgctca
ggttgctgcaacaaccggttgatgaaatgtgttcccatagtcacctccagcagaaacctg
caggtgataaagatccaatatgtaaatatgaaacccaaatatgagcaagccatcatcaca
gtggaagatcacgtcacctgtcggtgccagtcatgcacgtcttcctcgtcttctcttccg
tcctcatctgactcaaacactcactcctgtcagagcaaccccctgccagcttccccccag
cagcctcccccatctttgtcccattcccaggccctcccgcggtctgttcagcccggttca
caaaagactctcacctccaaggctgacctgcatcgccatgatgacctgaagcacaaccag
caggagcagccggtggcgaagcaggttcagcggggcagttatacccactggacgcaacct
aggctgcaccagtcccccgcacacatgcagccgggggtgtaccagcacactgctgctggg
cctgccctggtcaacagccaaccacctgagacaagaacacagcacggcgtcatgaagagc
acgcagcaggtcgtgcacggcagcgggtacgacggcaaggaggagagcagcgtgaacggg
acaaagagcagcggggagatgcgtcacccagatcacatgcagagacagcaggagctgttg
cagcatcagcaaagacagcagcttcattatccacagcaaactacagaagaccaagtgctg
aggacacagtcccacctcaacgctccacagtcagacagcgcctctccacccgtcagcccc
acccagccgctgagagtcgagcaaacccccgctgcacctacgatggcctaccagaaagac
tcagtgagcagtggaaaatacgtagaggtcacgcatcccagagagcctgaggctgtaacc
accgctcagaaagaaagaaaagacagggaggaaagcgggtcatccagtagtggggacacg
gccagggtggagctggctagtcaggtgaaggacagagactcaaagatcagcagtgggagc
gggcacctaaccgaagaggagagaaaacagaaaatagtggaaacggtacagagggaactg
gataaagagtctcaccttcatccacatccaccccagcagagaccaagaccgacctttaaa
tcagccctcccaaccgtggctcccaggccatcgtcccgtcgctccccgtttcgacccgcc
tcacctcgccgccgcaggaaacatcgcaaacgcatcagcaaagaagctatgagagccatg
atcatgtag
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