Takifugu rubripes (torafugu): 101072355
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Entry
101072355 CDS
T02386
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3 isoform X1
KO
K06244
laminin, beta 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04382
Cornified envelope formation
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101072355 (lamb3)
04518 Integrin signaling
101072355 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101072355 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101072355 (lamb3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
CCDC171
CEP135_TSGA10_CC
DUF745
F5_F8_type_C
COG6_N
FapA
ISG65-75
LEKR1
ATG16
Rogdi_lz
NPV_P10
Mig-14
DUF8567
DUF3584
CCDC18_2nd
EzrA
Motif
Other DBs
NCBI-GeneID:
101072355
NCBI-ProteinID:
XP_011611933
LinkDB
All DBs
Position
19:4340404..4356435
Genome browser
AA seq
1165 aa
AA seq
DB search
MRILVLVAALVTTSQASNDCLQGACYPPSGDLLLGRAQQLRASSTCGLAGSEAFCTPYQQ
RRMKCCPCDSRNPKDPLAHTVQEVLATSGPDRWWQSKKGVSPVTLQVDLNNLFHLHNLVL
NFKGPRPSDFVIERSLDNGTTWKPALYLATDCQKVFPDIATALPIRLEEPHCVTLPPTAE
NPYQDQNVEFNPLRQYTYVSAPKSKKVEELSGLTGLRVRMTGLGDVPQLPGRSLSRFFAI
KEMRMMGSCMCHGHANRCLPDMQNSAAQASLQVTPRCDCQHNTAGMNCERCDDLFNDLPW
RPAEEGKTHSCQRCECNSHARRCRFDPAVYEASGRRSGGVCEGCMHHTTGPKCDRCAPGY
QPNPRSKMDRPDACIRCVCSTEGTVNAGGCDDTTSSCQCKVNVEGPRCDRCKRGYYGLSA
ANPLGCSKCSCSSDGSISDVCDPVIGQCLCRPHFHGSNCDMCSNGYWKPFLSERCVPCNC
DPTTSYSDTCDQVTGQCRCRPNFGGRTCNECPENTFGDPLLGCQKCQCDPEGTLPEGCNK
QTGVCLCRPGVTGSRCGSCSRGHCDTFPTCKLCPSCFFTLDSQRQNLSLALNSITPHFPT
TPDHSSVNFGPRILALEAQLKLIQESISFPPSTAQQVDDVLSQLEELRNQLKKINDGLSP
PLRTPGLDSDLDKLWALLERLTVEYKAKKSAMDNTLSSNNAGAFSAIKQAYKESSEAAGK
VNASETTLMESADIRENALDLLNQVQPANTRALYKLNHVMSSQPDLTPVAKQVCGSVRTE
PCTPLQCEGKDLCPPEGTPPCKAAEKCVGALPLSKRADADVKNVKGKLERLAKKITDAAE
KLQETQEITNQVRQSAAKLSNKMRETRDRLEDDLEETRGVVKDLKDFLSDPLSNLTHIQD
VSDWILKAKLPLSPAALKKKLEELKNLAANLSDSSTVLNNAAPQLDEARKLLDEAQEARN
QALGVKGDVDGLLSSFGMVEKSLSDIEDKVQNSTYLMDDLKKRLMQAKDQLSPAEKNLDD
ANTMMKPMTSQLRALKDLLENAQQKAQEARDSSEDAEREAAIGSNDLLTLEKQLDRLKAQ
VPPGGAGGSTGALADRVAELQKKAGLLANSTGSMFKALEGKGDSLRNLQAEILQKSRRLD
GLEIILQVLLAQLRKKAHDLSICQG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccttgtccttgtggccgcgttggtgacaacatctcaggcgagcaacgactgt
ttgcaaggggcctgttacccacccagcggcgatctgctgctgggtcgggctcagcagctt
cgcgcctcttccacatgtggtcttgctggctccgaggccttctgcaccccctaccaacag
cggcgcatgaaatgttgtccatgtgactccaggaacccaaaagatccgctggcccacaca
gtacaggaggttctggccacatctggaccagatcggtggtggcagtccaagaagggtgtg
agtcctgtcacgcttcaggtggacctgaacaacctgttccatcttcacaacctggtgctc
aactttaagggtcctcgtcccagcgactttgtcatagaacgctctcttgataacggcaca
acctggaaacctgctctctacttggcaacagactgtcagaaagtgtttcctgacattgca
accgccttgccgatccgactggaagagccacactgcgtcacgctgccccctaccgctgaa
aatccataccaagatcaaaatgtggagttcaaccctctccgtcagtacacttacgtcagt
gcgccaaaaagcaagaaagttgaagagctctcagggctgacgggactcagggtgaggatg
accggcctcggtgatgttcctcagcttccgggtcgatccctcagcagatttttcgccatc
aaagagatgaggatgatgggcagctgcatgtgtcacggtcacgccaaccgctgcctgcca
gacatgcaaaacagcgctgctcaagccagcctgcaggtgacccctcggtgtgactgtcaa
cacaacaccgcaggcatgaactgcgaacgctgcgatgatctcttcaatgacctgccctgg
aggcccgcagaggagggcaaaacccactcctgccagcgttgcgagtgcaatagccacgcc
cggcgatgtcgtttcgatccggctgtgtacgaagccagtgggcggaggagcggaggagtg
tgtgagggctgcatgcaccacacaacagggcccaagtgtgatcgctgtgccccaggctac
cagcccaatccccgcagcaaaatggaccgccctgacgcctgcatacgttgtgtttgcagc
actgaagggacggttaatgctggcgggtgtgatgacacaacaagctcatgccagtgtaag
gtgaatgttgaaggtccacgctgtgaccgctgtaagagagggtactacggcctaagcgcc
gccaaccccctgggctgctccaaatgttcctgttcttctgacgggtccatttcggatgtt
tgtgaccccgtgatcggccagtgtctctgccgtcctcatttccacggatccaactgtgat
atgtgttcaaatggctactggaaacccttcttgtctgagcgctgcgtgccctgcaactgt
gaccccaccacatcctacagtgacacctgtgaccaggtgactggacagtgtcgctgcaga
ccaaattttggaggccgaacatgcaatgagtgtccagaaaacacatttggagacccccta
ttaggctgccaaaagtgccagtgtgatcctgaaggaactcttccagaaggttgcaacaag
cagactggggtgtgtttgtgtcgtccaggcgtcacagggtcacgctgcggttcttgcagc
cgtgggcactgtgacaccttcccaacgtgcaagttgtgcccttcctgcttcttcactctg
gacagccagaggcagaacctcagcttggctctaaacagcatcaccccacatttcccaacc
accccagaccactctagtgtcaacttcggtcctcgtattcttgccctggaggcacaatta
aaactgatccaggagtccatttcatttcctccaagtacagcccaacaggtcgatgatgtt
ctgtcccagctggaggagctgaggaatcagttgaagaagatcaatgatggactctcgcct
ccactgaggacccctggtctggattcagacctggataaactctgggctctgctggagcgc
ctcacagtggagtataaagcaaagaaaagtgcaatggacaacacactcagttccaacaat
gcaggagccttttctgccatcaaacaagcctataaagaatccagtgaggcagctgggaaa
gtgaatgccagtgaaacaacgttgatggagtcagcggatatcagagaaaatgccctggat
cttctcaatcaagtccaaccagccaacaccagagctctgtacaaattgaaccacgtcatg
tcctcgcaaccagacctcactcctgttgccaagcaggtgtgtggcagtgttcgcacagag
ccctgcacccctctgcagtgtgagggtaaagatctgtgtccaccagagggaaccccacct
tgtaaagcagctgagaaatgcgtgggtgccctacctctgagcaagagggctgatgcagat
gtgaagaatgtgaaaggcaagctggaaagactggccaagaaaatcacagatgctgcagag
aagctccaggaaacacaggagataaccaaccaggtgagacagtctgctgctaagctgtcc
aataagatgagagagaccagagacaggctggaagatgacttggaggagacacgtggtgtt
gtgaaagacctcaaagatttcctgtcagaccctttgtccaacctgacccacatccaggat
gtgagtgactggatcctgaaagctaagttgccgcttagcccagctgctctgaagaaaaag
ctggaggagctaaagaatctggcagcgaacctatcagacagttcaactgtgttgaacaat
gctgcaccacagctggatgaagccagaaaacttctggacgaagctcaggaagccaggaac
caagctctgggtgtgaagggcgacgttgatgggttgctttccagttttggcatggtggag
aagtccctgtcagacatagaggacaaggtgcagaacagcacatatctcatggatgaccta
aagaagcgtctgatgcaggccaaagaccagctgagccctgcagagaagaatctggatgat
gccaacacaatgatgaagcccatgacctctcagcttagggctctaaaagacttgctggag
aatgcacagcagaaggcacaggaagctcgagatagctcagaagatgcagagagagaagca
gcaattggcagtaatgacctgctgactttggagaaacagctggatcgtctcaaagctcag
gttcctccaggtggggctggtggatccacgggggcgctggctgatcgagtagcagagctg
cagaagaaagctggattgctggccaacagcactggcagcatgtttaaggccctggaaggt
aaaggagattccctcaggaacctgcaggctgaaatcctacagaagtccagaagacttgat
ggactggaaattatacttcaagttcttttggcacagctcaggaagaaagcccacgacctg
agcatttgccagggttaa
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