Takifugu rubripes (torafugu): 101072637
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Entry
101072637 CDS
T02386
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03030
DNA replication
tru03420
Nucleotide excision repair
tru03430
Mismatch repair
tru03440
Homologous recombination
tru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101072637
03420 Nucleotide excision repair
101072637
03430 Mismatch repair
101072637
03440 Homologous recombination
101072637
03460 Fanconi anemia pathway
101072637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tru03000
]
101072637
03032 DNA replication proteins [BR:
tru03032
]
101072637
03400 DNA repair and recombination proteins [BR:
tru03400
]
101072637
Transcription factors [BR:
tru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101072637
DNA replication proteins [BR:
tru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101072637
DNA repair and recombination proteins [BR:
tru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101072637
MMR (mismatch excision repair)
101072637
DSBR (double strand breaks repair)
HR (homologous recombination)
101072637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
101072637
NCBI-ProteinID:
XP_029704374
LinkDB
All DBs
Position
15:complement(10969867..10992659)
Genome browser
AA seq
713 aa
AA seq
DB search
MDINLTQGAVEDLVEGRPVNDPVLQLVDTLQITKGSGPTRYRVRMSDGRHLWSAFLLATQ
LNHLSEENLLVPHCVCLLKKTTTSTLSDGRRVVIILDMEILQSAEKSGGLIGNPTTYKER
SKSSPEEPTPAAQLGNSSDNSRAAFSPRGGGTASPMKTSAEKPSPSKFSPSEASSSKFSP
MKGSSFKFSPAKASPTTFSPAKGSPAKFSPTKASPSTFSPAKASPSTFSPAKASPTTFSP
AKGFPAKFSPAKASTSKFSPVKGSPSKFSPTKASSSSPGASSNMIPIAQLNPYQSKWTIR
ARVMNKSSIRTWNNSRGEGKLFSFEIVDESGEMKITAFNKEVDKFFSLVEQGKVYYISKA
TLKVANKQYNTLKHDYEMTLHAHSSIMPCADGQDIPAVQCDFVPIAELENRDKDAIIDVI
GVCKTAEDVSRITTKSSREVSKRTLHLIDTTGKMVAATLWGEEAEKFEGSEQPVVAIKGA
RLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDQGGYALASQSLSETKSGGSGMRMNW
KTLSDVKNENLGHGEKADYFSCVATLLYSRKDTCLYRACPSVDCNKKVLDQHNGWFRCEK
CNREFPNFKYRLLLSANLADFGDNQWVTCFQETAEALLGHSAETLGQLRDTDEAAFDAVF
QKANFTTHIFKNRVKLETYNDESRVKVTVMEVQPVNHREYSRMLLSNIHNLIQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggatataaatctcactcagggcgcagttgaagatctggttgaaggaagaccagtcaat
gatcctgtcctgcagctggtagacactcttcagatcaccaagggatctggtccaaccagg
taccgtgtcagaatgagtgatggacggcatttgtggtcagcgttcctgctcgccacacaa
ttaaaccatctttcggaagagaacctgttggttccacactgtgtgtgtttgctcaagaag
accacaaccagcacattatcagatggcagacgtgtagttatcatcttggacatggaaata
ttacagtcggctgagaaaagtggaggtttgattggaaatcccaccacttataaagaaaga
tcaaagtcatcccctgaagagcctacacctgctgcacaactgggaaattcctccgacaac
agtagagctgctttctctccccgaggtggtggaacagcttcccccatgaaaacatcagca
gaaaagccttctccctccaagttttcaccctctgaggcttcatcatctaagttctcacct
atgaagggctcatcatttaaattttctcctgcaaaggcttcgccgaccacattttctcct
gcaaagggatccccagctaaattttctcctacaaaggcttcgccatccacattttctcct
gcaaaggcttcgccatccacattttctcctgcaaaggcttcgccgaccacattttctcct
gcaaagggattcccagctaaattttctcctgcaaaggcttccacatcgaaattttcccct
gtgaaaggttccccgtccaagttttcacccaccaaggcttccagcagttctccaggcgct
tcgtcaaacatgatccctatcgctcagctcaacccctaccaaagcaaatggaccatcaga
gccagagtcatgaacaagtccagtatccggacctggaataactccagaggagaagggaag
ctcttctcctttgagatagtagatgagagtggtgaaatgaagattacagccttcaacaaa
gaagtggataagttcttctctttagtggagcaaggaaaggtttactatatttccaaggct
actctgaaagtggcaaacaagcaatacaatactttaaagcatgattacgagatgaccctc
cacgctcattcctccatcatgccatgtgctgacggtcaggacatcccagcagtgcagtgt
gactttgtgccgattgccgagctagaaaacagagacaaggatgccatcatcgacgtgatc
ggagtgtgtaagactgctgaggatgtttcccgcatcaccactaaaagcagcagagaggtt
tccaagaggactcttcacctaatagacactactggaaaaatggtggcagccacactgtgg
ggagaagaggcggagaagtttgaaggctctgaacagcctgtggtcgccatcaaaggagct
cgcttgtctgattttggaggcagatctctgtctgctttgttcagttcaacagtcatggtc
aatccagacataccagaggctttcaggctaagggcatggtatgaccagggaggctatgcg
ctcgccagccagtctctgagcgagacaaaatcaggggggagcggcatgaggatgaactgg
aaaacactgagcgacgtcaaaaatgaaaatttgggacatggagagaaggcggactacttc
agctgcgtggcgacactactgtactctcggaaggacacttgcctgtaccgggcatgtccg
tctgtagactgtaacaagaaggtcctggaccagcacaacggctggttccgctgtgaaaag
tgtaaccgagaattccccaactttaaatacagactcctgctttctgccaacttggctgac
ttcggggataaccagtgggtgacgtgtttccaggagacggctgaggccctgctgggtcac
agtgcagaaacgctgggacagctcagagatacagatgaggcagcatttgatgctgtcttc
caaaaagccaacttcacaactcacatcttcaaaaacagagtcaagctggagacttacaac
gatgagagccgggtgaaggtaacagtgatggaggtccagccggtgaaccacagagagtac
agcaggatgctcctcagcaacatccacaacctcatccaatga
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